Apodemus sylvaticus (European woodmouse): 127673139
Help
Entry
127673139 CDS
T10613
Symbol
Tnrc18
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 18 protein
Organism
asyl Apodemus sylvaticus (European woodmouse)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127673139
NCBI-ProteinID:
XP_052024705
LinkDB
All DBs
Position
22:23871178..23963042
Genome browser
AA seq
2947 aa
AA seq
DB search
MDGRDFGPQRSVHGPPPPLLSGLAMDSHRVGAATAGRLPSSGLPGPPPPGKYMAGLNLHP
HPGEAFLGSFVSSGMGPSTPSQGSPVSLPSGLSFRSPTPSNLPMVQLWAAHTHEGFSHLP
SGLYPSYLHLNHLDPPSSGSPLLSQLGQPSIFDTQKDGFYLPAPGTLPAHTPSSRTPSGH
SSGGPAKGSSREGSGKDRSGRGGDPPPLFGKKDPRAREEVSGARGVVDLTQEARAEGRQD
RGSSRLAERLSPFLAEAKAKGALQPSALSLCNGVVDTGLVAELGRGGAKEVARQEENVRL
LRRAEALLPAARPCGSPLPPPPPLPPKGPPAPPSSTPAGVYTVFREPGREHRVVAPTFVP
SVEAFDERVGPIQIASQARDVRTREREPGRPGVLQGPPGSPRLERPEVLREKSSVIRSLK
RPPPSDGPPVARSSRSSPDARAYLPPKELLKPEADPRPCERAPRGLSSSAAQQAAKLFGL
EPSRPPGPEHKWKPFELGNFATTQMAVLAAQHHHASRAEEEAAVATASKKAYLDPGGAVP
RASATCARPGADLHAAAHGAAGEASAMQSLIKYSGSFAREAVAVRPGGCGKKSPFGGLGT
MKPEPTPTSAGPPRAQARLTHPGVPTTGGGRQLKRDPERPESAKAFGREAAGAQGEAEVR
HPPVGIAVAVARQKDSGSSSRLGSGLADQERSLSLNNVKGHGRADDDCNQVRHREDRLLG
TRLDRDQEKLLRESKELADLARLHPTSCAPNGLNPNLMVTGGPTLAGSGRWSADPAAHLA
TNPWLPRSGSTSMWLAGHPYGLGPPSLHQGMAPAFPPGLGGSLPSAYQFVRDPQSGQLVV
IPSDHLPHFAELMERAAVPPLWPALYPPGRSPLHHAQQLQLFSQQHFLRQQELLYLQQQA
AQALELQRSAQLVQERLKAQEHRTEMEEKMSKRSLETPGKAGLSAAGPGLLPRKSAGLAA
GPASSHSKAVSPPPSPRASPVTSLKAKVIQKVEDVSKPPAYTYPATPSSHPSSPPPASPP
PTPGLARKEEAPENVVEKKDLELEKEAPSPFQALFTDIPPRYPFQALPPHYGRPYPFLLQ
PTAAADADGLAPDVPLPADGPERLALSPEDKPICLSPSKIPEPPRDSQEEEEPLADREVK
AEVEDIEEGPTELPPLQSPLALPVPETMVAGSPAGGCGGSPLEAQALSTAGPGCREPSEV
SDFAQVAEPQMELPSGTEPCMAALELGTQLTPEPLVETKEEPVEVPLDVPMEEATAEAGP
EDSLPQPSLTEPLASLELSDCDLPVPEGQCLNLEAQEAAPAPASTCSLEESHSEPLLPGL
DDPLAGMNALAAAAELPQARPLPSLGPGVPAGEKLDTAPSLVLEHSFLQGITLLSEIAEL
ELDRKGQEVTDPEPNLVVRPSLESLLAASSHMLKEVLESPFSDPLKNLRLPRELNSNKKY
SWMQKKEERMFAMKSSLEDMDALELDFRMRLAEVQRRYKEKQRELVKLQRRRDSGDRHED
AHRSLARRGPGRPRKRTHTPSALSPPCKRGKSHSGSGKPGSKSLLTSDDYDLGVGIRKRH
KGPEEEQEALIGLGKARSRNQSWDDHESSSDFMSQLKIKKKKMASDQEQLASKLDRALSL
TKQNKLKAPFKFSDSPGGKPKTSGGCGRFLTQYDGLLGKDRKALAKGLGLALKPSREGKH
KTASKARKMEGGFQARGQPKSVHSPFASGVSSQSYNTDSDEEEDFLKNEWSTQGPSCSKL
ASSLLCGMVPKNSKPAVGPKLTKRGLAGPRTLKPKVATSRKQSFCLLLREAEARSSFSDS
SGEDSFDQDDSSEEEEEDEEEEGVGSYRLGAGEQALSPSLEESGLRLLARFAASALPSPV
VGPPLSVVQLEAGQKARKKEERQSLMGTEFEYTDSESEVKVPKQSPAGLLRAKKGVGEPG
QSLAAPGPGARASGPTSPDKAKLASEKGRKARKIRGPKEPGFEAGPEASDDDLWTRRRSE
RIFLHDASAAVQAPSNTAPATKPGRCGRGGAPSPRKDTGRAKDRKDPRKKKKGKEAGSAA
SLPPPRVATLPDSRAPHPGALPTAKRSKAKARGKEAKKESRGKGGAVSKLMESMAAEEDF
EPNQDSSFSEDEHLPRGGAAERPLTPAPRSCIIDKEELKDGLRVLIPMDDKLLYAGHVQT
VHSPDIYRVVVEGERGNRPHIYCLEQLLQEAIIDVRPASTRFLPQGTRIAAYWSQQYRCL
YPGTVVRGLLDLEDDGDLITVEFDDGDTGRIPLSHIRLLPPDYKIQCAEPSPALLVPSAK
RRSRKTSKDTGEVKEGAATGPQEATGGKARGRGRKPSTKAKADRAVVLEEGAATNEVPSA
PLALEPVSTPNSKKSTPEPVDKRARAPKARSVSAQPSPVSPAFSSCPAPEPFGELPTPAT
APLVTIPVTMPATRPKPKKARATEGSGAKGPRRPGEDDELLVKLDHEGVMSPKSKKAKEA
LLLREDPGPGGWPESTGLLSLGSYSPTVGNSEPKATWPKGLDGDLAQEPGPGLPLEDPSN
SKSPDKAQAEQDGAEESETTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSGSETEGEEDA
EKNGEDGRGAGGRTCSATSSRASSPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSTTDEDSSCSSDDEAAPAPAAGPSTQPALPTKVSKPTSKARSSAHSPGKKAPPAT
QPPPQPPPQPQQTLQPKTQAGAGAKSRPKKREGVHLPTTKELAKRQRLPSVENRPKIAAF
LPARQLWKWFGKPTQRRGMKGKARKLFYKAIVRGKEMIRIGDCAVFLSAGRPNLPYIGRI
QSMWESWGNNMVVRVKWFYHPEETSPGKQFHEGQHWDQKSGHSLPAALRASSQRKDFMER
ALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKTKKYQDSEGLYYLAGTYEPTTGMIFST
DGVPVLC
NT seq
8844 nt
NT seq
+upstream
nt +downstream
nt
atggatggccgagatttcgggccccagcggtccgtccacggccccccgccgccgctgctg
tccggcttggccatggacagccaccgcgtgggcgcggccaccgccggacgcttgccctcc
tcgggcttgccaggtcccccgccgcccgggaaatacatggccggtctcaacctacacccg
cacccgggcgaggccttcttgggcagctttgtgtccagtgggatggggccctcgacccca
tctcagggaagcccggtgtccttgccctctggcctctccttccgctcccccacccccagc
aacttgcccatggtgcagctgtgggctgcccacacccatgaaggtttttcccacctgccc
agtgggctgtatccatcctacctccacctgaaccacctggatccccccagcagtgggagc
cccctcctcagccagctgggtcagcccagcatcttcgacacccagaaagatggcttctat
ctgcccgcaccggggaccctacctgctcacacgccctcatccagaactcctagtggccac
tcctcaggcggtccagccaaaggctcctcccgggagggttcagggaaggatcgctcaggc
cgtggtggagaccctcctccgttgtttggcaagaaagatcctcgggcacgtgaggaggtg
tccggggcccgtggtgtggtggacttgacccaggaggcccgagctgagggccgccaggac
cgaggatcctcacgcctggctgagcgcctgtctccctttctggccgaggccaaagccaag
ggcgcactgcagccatccgccttgagcctgtgcaatggagtggtggacacgggactggtg
gccgagctgggccgtggaggtgccaaggaggtggccaggcaggaggagaatgttcgactg
ctgcggcgggctgaggccctgctgcctgccgcaaggccctgtgggtctcccctaccgcca
ccaccaccactgccccccaagggtccccccgcacccccttcctcgacaccagcaggtgtc
tacaccgtgttccgtgaaccaggccgtgagcaccgcgtggtggcgcccacctttgtgcct
tctgtggaggcctttgatgagcgtgtgggacccatccagatagcatcccaggctcgtgat
gtccggacccgggagcgcgaaccaggccgccccggggtcctgcaaggcccacccggatct
ccacgactggagcgaccggaggtcctgcgggagaaaagctcggtcatccgctccctcaag
cgtccgcctccatcggatggccctccagtagcccgttcctcccgctcctccccggatgcc
cgagcctacctgccccccaaggaactactcaagcccgaggctgatccgaggccttgcgag
cgagcgccccgaggtctgagctcatccgccgcccagcaggctgctaagctctttggcctg
gaaccctcccgaccccccggcccggagcacaagtggaaaccctttgaactgggcaacttt
gccaccacgcagatggctgtcctggcagcccagcaccaccatgccagcagagccgaagag
gaagctgctgttgccacagcatccaaaaaggcctacctggaccccgggggggcagtgccc
cgggcctcggccacctgtgccaggcccggcgccgacctccacgccgcagcccacggtgcc
gccggagaggcctccgctatgcagagcctcatcaaatacagcggtagctttgctcgggag
gcggtggcagtgcgccctggtggctgcgggaagaagagcccctttggaggcctgggcact
atgaaacctgaacctacacccacgtctgccggaccccctagagcccaggcccggctcaca
caccccggggtccccacaactggagggggccggcagctgaaacgggacccagagagaccc
gagagtgccaaggcctttgggcgagaggccgctggtgcccagggggaagccgaagtgagg
cacccgcccgttggcattgccgtggctgtggcccggcagaaggacagtgggagcagtagc
cggctggggtctgggctggcagaccaggaacgttctttgtcactgaacaacgtcaaaggg
catggccgggctgatgatgactgtaatcaagtcaggcaccgtgaggatcggctgctaggg
acacggctggaccgcgaccaggagaagctgctccgagaaagtaaggagctggctgacttg
gcccgtctacaccccaccagctgcgctcccaatggtctgaaccctaacctcatggtgacc
ggtggcccgacgctggcaggctcaggacgctggtctgctgatcccgcggctcacttggcc
acgaacccctggctgcctcgctcagggagcacatccatgtggcttgccggacacccttat
ggcctgggacccccctctttgcaccagggcatggcccctgcatttccacctggcttaggg
ggctccttaccgtcagcttaccagttcgtcagggacccccagtctggccagctggtggtt
atccctagtgatcacctgcctcattttgctgagctgatggagcgcgcggcagtgcctccc
ctctggccggccctctacccgccaggccgcagccccctgcaccacgcccagcagctgcag
ctcttctcccagcagcactttctgcggcagcaagagctgctctacctgcagcagcaggcg
gcacaggccctggagctgcagcggagcgcacagctggtgcaggaacggttgaaagcacag
gagcatcgcacagagatggaggagaagatgagtaagagaagcctggagaccccgggcaag
gccggcctgagtgctgcaggccccgggctgctgcctcgcaagtctgccggcctggctgcc
ggcccggcaagcagccacagcaaggccgtgagcccacccccgtctccccgagcctccccc
gtgacctcgctgaaggccaaggtcatccagaaggtagaggatgtgtctaagcctccggcc
tatacctaccccgccacacctagctcgcaccccagcagcccaccacctgcctccccgcct
cccacccctgggctcgcccgcaaggaagaggctcccgagaacgtggtggagaagaaagac
ctggagttggagaaggaggcgcccagcccgttccaggccctgttcacagatatccctccc
aggtatccattccaagccctgcctccgcactacggacgaccctaccccttcctgctgcaa
cccacagcggctgctgatgccgatggcctcgccccagatgtgccactccccgctgatggg
cccgagcgcctggcactgtcccctgaagacaagcccatctgcctgtcaccctcgaagatc
ccagagcctcctcgggacagccaggaggaggaggagccgctggcggaccgggaagtgaag
gctgaagttgaggatatcgaagagggtcccacagagctgcctcccctccagtcacctttg
gccctgcctgtcccagagaccatggtggctgggagccctgcaggtggctgtggaggtagt
cctctagaggcccaggcgttgagcacagcaggtccgggctgccgagagccctctgaagtg
tcagacttcgcacaggttgctgagccgcagatggaactaccgagtgggacagagccctgc
atggctgccctggagctggggacacagctgacacctgagccgctggtggagactaaggaa
gagccggtggaggtgcccctggatgtgccgatggaggaggccacggcagaggcagggcct
gaggacagtctgccccagccatccttgactgagcctctggccagccttgagctctcagac
tgtgatttgcctgtcccagagggccagtgtctcaatctggaggcccaggaggctgcacct
gctcctgccagtacctgctctctggaagaaagccactccgaaccgctcctgcctggcctg
gatgacccactggccggcatgaatgctctggcagctgcagctgagctgccccaggccagg
cctctgccctccctgggtcccggagtcccagccggggagaagctggacacagcccccagc
ctagtcctggaacacagcttcctacagggcatcaccctcctgagtgagatcgccgagctg
gagctggaccggaagggccaggaggttacagatccagagccaaacctagtcgtgagaccc
tccctggaaagcctgctggcggccagcagccacatgctgaaggaagtgctggagagccct
ttctcagacccactcaagaacttgcggcttccacgggaactgaactccaacaagaagtat
agctggatgcagaagaaagaggaacggatgtttgctatgaagtcttccttggaggacatg
gatgccctggagctggacttccggatgcgactggcagaggtccagcggcggtacaaagag
aaacagcgggagctggtcaagctccagcgacggcgggactccggggacaggcacgaggat
gcccatagaagcctggcacgcagaggccctggcaggccgaggaaacggacacacaccccg
agcgccctgtcgcccccctgcaagagagggaagagccacagcggtagcggaaagccaggc
agcaagtccttgctgacatcagatgactatgacctgggagtgggaatacggaagagacac
aaggggcctgaggaggagcaagaggccctcatcggcttggggaaggcccgcagcaggaac
cagagctgggacgatcacgaatcctcgtctgatttcatgagtcagctgaagattaagaag
aaaaagatggcgagcgaccaggagcagctggcgagcaagctggacagagccctctccctc
acaaagcaaaacaaactgaaggcacccttcaagttttccgacagccccggggggaaaccg
aaaaccagtgggggctgtggcaggttcttgacacagtatgacggcctgctgggcaaggac
cggaaagcgctggccaaaggactcggcttggctctgaaaccctccagagaaggtaaacac
aaaacagcttccaaagccaggaagatggaggggggcttccaggccagaggccagcccaag
tctgtccattctccatttgcctcgggagtaagcagtcagtcttacaatacggactctgac
gaagaggaagacttcctgaagaatgagtggtctacccagggcccctcctgctccaaactg
gcctcgtccctcctgtgtggcatggtgcccaagaacagcaagccagccgtaggacctaag
ctgaccaagaggggcctggcaggcccccggactttgaaacccaaggtggccaccagcagg
aagcagtccttctgtttgctgctccgagaggcggaggcccgctcctccttcagcgactct
tccggggaggactcctttgatcaagatgacagctccgaagaggaggaggaagatgaggaa
gaggaaggcgttggtagctataggctgggtgccggggaacaggccctgtcgccaagcctg
gaggagagtgggctgaggctgctggcccgttttgcggccagtgctctccccagccctgtc
gtggggccgcccctatctgtggtgcagctggaggctgggcagaaggcccggaagaaggag
gagcggcagagtttgatgggcacagagttcgagtacacagactcggagagtgaagtgaag
gttcccaagcagtcgcctgctgggctgctacgggccaagaaaggggtcggggagccaggc
cagtctctggctgcacccggacctggcgcccgggcctctggtcccaccagcccagacaag
gccaagctggcctcagagaagggacgcaaagcccggaagattcgtggccccaaggaaccc
ggctttgaggcggggccagaggccagtgatgacgacctgtggacgcgccgcaggagcgag
cgcatcttcttacacgacgcctccgctgcagtccaggcgcccagcaacaccgcgccagcc
accaagcctggccgctgtggcaggggtggtgcccctagcccccggaaggacactgggcga
gccaaggacaggaaggaccccaggaagaagaagaaagggaaagaggctgggtcagcagcc
tcgctgccaccaccgcgtgttgccaccctgcctgactccagggcaccccacccaggggcc
ctgccgactgccaagcgcagcaaggccaaggccagagggaaagaagcaaagaaggagagc
cgaggaaaagggggtgctgtgagcaagctgatggagagcatggcggcagaggaagacttt
gaacccaaccaggactcaagtttctctgaggatgagcacttgccccgtgggggggccgca
gagagacctttgaccccagccccccgctcctgcatcattgacaaggaggagctgaaggac
ggcctgcgcgtgctcatccctatggacgacaagctgctgtacgcgggccacgtgcagacc
gtgcattcgcccgacatataccgcgtggtggtggaaggtgagcgtgggaatcgtccccac
atctactgcctggagcagctactgcaggaggcgattatagatgtgaggccggcctctaca
cgcttcttgccccaggggaccaggatcgctgcctactggagccagcagtaccgctgcctg
tacccaggcacggtggtccgagggctgctggacctggaagacgacggagacctgatcact
gtggagtttgatgacggagacacgggcaggatccccctctcacacatccgcctcttgccg
ccggactataaaatccaatgtgctgagccctctccagcactcttagtgcccagcgcaaaa
cggcgtagtaggaagaccagcaaagacacaggggaagtcaaagaaggagctgccacgggg
cctcaggaggctacagggggcaaggctcgggggcgagggcggaaacctagcaccaaagcc
aaggctgacagagctgttgtcctggaggaaggggctgctaccaatgaggtccccagtgct
cctttggccctggaacccgtcagcactccaaattctaagaagagtaccccagaaccagtg
gacaagcgggccagagcccccaaagcacgctcggtctctgcacagcccagccccgtatca
cccgccttctctagctgcccagctccagagccctttggggagctcccaacccccgctaca
gccccactggtcaccatacctgtcaccatgcctgccactcgccccaaacccaagaaggct
cgggccactgaggggtcaggtgccaaaggtccccggaggccaggggaagatgacgaactg
cttgtcaaactggaccacgagggggtcatgtctcccaaaagcaagaaggccaaagaggcc
ctcctcctgcgggaagatccagggcccgggggttggccagagtccacagggctgctcagc
ctgggcagctactcaccaactgttggcaacagtgagcccaaggccacctggcccaagggt
ctagatggagacctcgctcaggagcccgggccggggcttcctttagaagatcctagcaac
tccaaaagcccagacaaggcccaggctgaacaagatggggcagaggagtcagagactacg
tctagcagcagcagcagcagcagtagcagcagcagtagcagcagcagcagcagcagtagc
agcagcagcagcagcagcagcagcagcagcggttcagagacagaaggcgaggaggatgct
gagaagaatggggaggatggccggggtgcagggggccgtacctgcagtgctaccagctcc
agggcctcttctcctgcctcctcttcctcctcttcttcctcctcctcttcttcctcctcc
tcttcctcctcttcctcctcctcttcctcgtcctcatcttcttcctcctcttcttcttcc
tcctcctcttcctcttccaccacagacgaggactcttcttgcagctcagatgatgaagca
gcccctgcccccgcagctggtccctccacacagccagcgctccccactaaggtatccaag
ccaactagcaaggcacgctcctcagctcactccccaggcaagaaggcaccccccgccacc
cagccaccaccccagcccccaccccagccccagcagactcttcagcccaagacccaggct
ggggctggggccaagagcaggcccaagaagagagaaggcgtacacctgcctaccaccaag
gagctggccaaacggcagcgtctgccttccgtggagaacaggcccaagatcgctgccttc
ctacctgcccggcagctttggaagtggtttggcaagcccacccagcggcgaggaatgaaa
ggcaaagctcgcaagctcttctacaaggccatcgtccgaggcaaggagatgatccgaatc
ggcgactgcgcagtcttcctgtcagctggccgccccaacctgccctatattggccggatc
cagagcatgtgggagtcatggggcaacaacatggtggtgcgtgtcaagtggttctaccat
cccgaagagaccagcccggggaagcagttccacgagggccagcactgggaccagaagtca
ggacacagccttcctgcagccctgcgggcctccagccagaggaaggactttatggagcgc
gccttgtaccagtcctcccacgtggatgagaatgacgttcagacagtgtcccacaagtgc
ctggtggtgggcctggaacagtatgaacagatgctgaagaccaagaaataccaggacagc
gagggcctttactacctcgcgggcacttatgagcccaccacaggcatgatcttctccaca
gatggtgtgcctgtgctctgctga
DBGET
integrated database retrieval system
