Apodemus sylvaticus (European woodmouse): 127673346
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Entry
127673346 CDS
T10613
Symbol
Ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asyl03037
]
127673346 (Ttc28)
Cilium and associated proteins [BR:
asyl03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
127673346 (Ttc28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
CFAP70_TPR_C
TPR_MalT
TPR_SusR
TPR_14
Rapsyn_N
RPN7
DUF6340
TPR_17
TPR_16
TPR_BSK1_C
TPR_19
TPR_9
TPR_NPHP3
TPR_11
TPR_6
RMD1-3
ANAPC5
TPR_YpiA_C
OrgC
T4SS
Motif
Other DBs
NCBI-GeneID:
127673346
NCBI-ProteinID:
XP_052024998
LinkDB
All DBs
Position
22
Genome browser
AA seq
2443 aa
AA seq
DB search
MEQPLPLAPEPASARSRRRREPESPPAPIPLFGAKTIVQRSPDEPALSKAEFVEKVRQSN
QACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKTQQYHKALDDAIKARLLNPKWP
KAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDTLEPTYQQL
QKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAHWS
LGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMK
LKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEARELGNMGAVYIA
MGDFENAVQCHEQHLRIAKDLGSKREEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQE
LMEKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQM
KGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISME
VNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCS
RGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKD
LHDKLSQAKAYCNLGLAFKALLNFAKAEECQKYLLSLAQSLDNSQAKFRALGNLGDIFVC
KKDVNGAIKFYEQQLGLSHHVKDRRLEASAYAALGTAYRMVQKYDKALGYHTQELEVYQE
LSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKLKEPSLEAQVYGNMGITKMN
MNVMEDAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSV
AQSLNRMQDQAKAYRGLGNGHRATGSLQQALVCFEKRLVVAHELGEASNKAQAYGELGSL
HSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQI
AEETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRT
HHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASAL
FETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVE
RQTGQQDSDPYSPITIDQILELVNAQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEHYLG
DNSVESSSDFQASSSAALPVAASSTLEQHIASVREALGVESYYSRACASSETESEAGDIM
EQQLEEMNKQLNSATDPTGFLRMVRHNSLLHRSCQSMTSLFSGTVSPSKDGTSSLPRRQN
SLAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLVPFALLKGSASNEYL
YERFTLIAVPAVRSLGPHSKCHLRKTPPTYSSSTAMAAVIGNPKLPSAVMDRWLWGPMPS
AEEEAYMVSELLGCQPLVGSMATKERVMSALTQAECVHFATHVSWKLSALVLTPNTEGNP
AGSKSSFGHPYTIPESLRVQDDASDVESISDCPPLRELLLTAADLLDLRLSVKLVVLSSS
QEANGRVTADGLVALTRAFLAAGAQCVLVALWPVPVAASKMFVHAFYSSLLNGLKASASL
GEAMKVVQSSKAFSHPANWAGFTLIGSDVKLNSPSSLVGQALTEILQHPERARDALRVLL
HLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPATSGLPAAVFFP
TSDPGDRLQQCSSTLQALLGLPNPALQALCKLITASETGEQLISRLHQVLVQLQACEKEQ
DFASAPIPVSLSVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQASRRTTHFALQSL
LSLFDSTELPKRLSLDSSSSLESLASAQSMSNALPLGSQHPPFSPTGADSIASDAISVYS
LSSIASSMSFVSKPEGGLEGGGPRGRQDYDRSKNTHPQRATLPRRQMSPQARRGASKEEE
EYEGFSIISMEPLSAYQGEGKTRFSPDPKQPCVKAPGGVRLSVSSKGSVSTPNSPVKMTL
IPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESTPKLDPQELAQRILEETKSHL
LAVERLQRSGGPAGSDRDDGVVAPSSTTVFRASETSAFSKPILSHQRSQLSPLTVKPQPP
ARSSSLPKVSSPATSEVSGKDGLSPPGSSHPSPGRDTPVSPADPPLFRLKYPSSPYSAHI
SKSPRNASPACSAPSPALSYSSAGSARSSPADAPDEKVQAVHSLKMLWQSTPQPPRGPRK
ICRGAPGTLTSKRDVLSLLNLSPRHGKEEGGVDRLELKELSVQPCDEVLPKVPTNGHWCT
DTATLTTPSGCNPTAAATRPLRLPLANGYKFLSPGRLFPSSKC
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccgctgcctctggcgcccgagccggcctcggcgcggagccgcaggcggcgg
gagccggagtctccgccggcgccgatccctctctttggtgctaagactattgtccagaga
agtcctgatgaaccagcactgagcaaagctgaatttgttgagaaagttcgtcagagtaac
caggcctgtcatgatggagacttccacacagctattgttttgtacaatgaagccctggca
gttgaccctcagaactgcattttgtatagcaacagatctgcagcctacatgaaaacccag
cagtaccacaaggcgctggatgatgcaatcaaagcccggctcctcaaccccaaatggcca
aaggcatacttccgacagggtgttgccctccagtaccttggacgtcacgcggacgccctg
gcagcctttgcatcagggctggctcaggaccccaaaagtctccagctcctggtggggatg
gtggaagctgccatgaagtcccccatgagagacaccctggagcccacgtaccagcagctt
cagaagatgaagctggacaagagcccctttgtggtcgtgtctgtggttgggcaggagctc
ctgacagccggccaccacggcgcctcggtggtggtcctggaagctgctttgaagattggc
acttgcagcctcaaactgagaggctctgtcttctccgccctgagcagtgcacactggtct
cttggcaacacagagaagagtactggatacatgcagcaagacctggacgtagccaagacc
ttaggtgaccagacaggagaatgccgagctcacgggaatctaggctctgcattcttttcc
aaggggaattacagagaggccctcacaaaccacaggcatcagctggtgctcgccatgaag
ctcaaggatcgggaggcagcgtcgtcagcactgagcagtctgggtcacgtgtacacagcc
atcggagactaccccaatgcgctggccagtcacaagcagtgcgtcctcctcgccaagcag
tccaaagatgacctttccgaagcccgagaactcgggaacatgggagccgtgtacatcgcc
atgggcgactttgagaatgccgtgcagtgccatgagcagcacctgcggatagccaaggac
ctggggagcaagcgcgaggaggcccgtgcctacagtaacctgggcagtgcctaccactac
cggaggaacttcgacaaggccatgtcctaccacaactgtgtgctggagctggcgcaggag
ctgatggagaagcccattgagatgcgagcctacgctggcttgggccatgccgccaggtgc
atgcaggacctggagagggccaaacagtaccacgagcagcagctgggtatcgcggaggac
ctcaaggaccgggcagcagagggccgcgcatcctctaatctggggatcatccaccagatg
aaaggcgattacgacacagccctgaagctccacaagacgcacctgtgcatcgctcaggag
ctgagcgactacgctgcccagggccgcgcctatgggaatatgggcaacgcctacaatgcc
ctgggcatgtatgaccaggccgtcaagtaccaccgtcaagagctgcagatctccatggaa
gtgaacgaccgtgcctctcaggcctcgactcacgggaacctggctgtcgcctaccaggcc
ctgggagcccacgaccgggcgctgcagcactaccagaaccacttgaacattgcccgggag
ctgagagacatccagagcgaggcccgggctctcagcaacctggggaacttccactgctcc
agaggagagtatgtccaggctgcaccctactatgagcagtacctgcgcctcgctcccgac
ctccaggacatggaaggggaagggaaggtctgccacaacctcggctatgcccattactgc
ctcggaaactaccaggaggccgtgaagtactatgagcaggacctggctctggccaaagac
cttcatgacaaactgagccaagcaaaagcctattgcaacttgggcctggccttcaaggct
ctgctgaactttgctaaagctgaggagtgtcagaagtaccttctgtccctagcccagtcc
ctggataattcccaggcaaaatttcgagccctagggaacctgggtgatatatttgtctgc
aaaaaggatgtgaatggtgcgataaagttctacgaacaacagctgggcctctctcaccat
gtgaaagacagaaggctggaggccagtgcctacgcggccctgggtactgcgtaccggatg
gtccagaaatatgacaaggccttgggttatcacacacaggagctggaggtctaccaggaa
ctgagtgacctgccgggggagtgccgggctcacgggcacctggcggctgtctacatggcc
cttggaaaatacacaatggcgttcaagtgttaccaggagcagctggagctggggcggaag
ctgaaggagccgagcctggaagcccaggtgtacggcaacatgggcatcacgaagatgaac
atgaacgtgatggaggacgccattggctactttgagcagcagctggccatgctgcagcag
ctcagcgggaacgagtctgttctggacaggggtcgggcctacggcaacctgggggattgc
tacgaggccctgggggactacgaggaagccatcaagtactatgagcagtacctgtctgtc
gcccagagtctgaaccgcatgcaagaccaagccaaggcctaccggggtctaggaaacgga
cacagggcgacggggagcttgcagcaggcccttgtgtgctttgagaagcggctcgtggtg
gcccatgagctcggggaggcctccaataaagcccaggcctacggagagctgggaagtctg
cacagccaactagggaactacgagcaagccatctcctgccttgagcgccagctgaacatt
gccagggacatgaaggaccgcgccttggaaagcgacgcggcctgcggcctggggggtgtc
taccagcagatgggagagtacgacacagccctgcagtaccaccagctagatctgcagatt
gcagaggagacagacaatcccacgtgccagggccgggcctatgggaacctgggtctcacc
tacgagtccctgggcacttttgagagggctgtggtctatcaggagcagcacctgagcatc
gcggcacagatgaacgacctggtggccaagactgtgtcctacagcagcctgggaaggact
caccatgccctgcagaactattcgcaggcagtcatgtacttacaggaaggcttaaggtta
gctgagcaactgggtcgaagagaagatgaagcaaaaatccgccacggtcttggtctctcc
ctttgggcaagcggaaacttggaggaggctcagcaccagctctacagggcgtcggccttg
tttgagacgatccggcacgaggcacagctgagcacagactacaagctctctctgttcgac
ctgcagacatcatcctaccaggccttgcagcgggtgcttgtcagcctaggccaccatgat
gaagccttggcagtagcagaaaggggccggacaagagcatttgctgacctgctggtggaa
agacagaccggacaacaggactccgacccctactcacccatcaccatcgaccagatccta
gagctggttaacgcccagcgagggctagtgctgtactactccctggccgcaggctacctg
tacagctggctgcttgctcctggagcaggaatcctgaagtttcatgaacattacttgggt
gataattcggtggaaagttccagtgacttccaagccagcagcagtgcagccttgcccgta
gcagccagctctaccctagagcagcacatcgccagtgtccgggaggccctgggggtggag
tcttactactccagggcctgtgccagcagtgagacagaaagcgaagctggagacatcatg
gaacagcagctggaggagatgaacaagcagctgaactcggccacagaccccacgggcttc
ctgaggatggtgcgccacaacagcctcctgcacaggagctgccagagcatgacgagcttg
ttcagtggtacggtgtcacccagcaaggatgggacctcctctctgcccaggaggcagaac
tcactggccaagcccccgctccgcgccctgtacgatctgctcatcgcgcccatggaaggg
ggcttgatgcactccagcggccccgtgggccggcatcggcagctggtcctggttctggag
ggggagctctaccttgtcccctttgctctcctgaagggcagcgcctccaacgagtacctg
tacgagcgctttaccctcatcgctgtgcctgccgtccgctcccttggtccgcactccaag
tgtcacctgaggaagaccccgcccacgtattccagctccaccgccatggcagctgtcata
ggcaaccctaagctcccgtcagcagtgatggacaggtggctgtggggcccgatgccctct
gcagaagaggaggcatacatggtgtcagagcttctgggctgtcagccccttgtgggcagt
atggccaccaaggagagggttatgagtgccctgacccaggccgagtgtgtccactttgct
acccatgtctcttggaagctgtcggccttagtcctcacacccaacacggagggcaaccct
gctggcagcaagagctccttcggccacccctacacgatccccgagtcactgcgggtacag
gacgatgcaagtgacgtagaaagcatctcggactgcccgccgctgcgggagctgctcctc
actgcggctgacctcctggacctgcggctatctgtgaagctggtggtgctcagctcctcc
caggaggccaacggacgagtcaccgcagacggcttggtggcactgacgcgggccttccta
gctgccggcgcacagtgtgtacttgtggctctgtggccggtgccggttgcggcttccaag
atgttcgttcatgccttctactcatccctgctgaacggcctgaaggccagcgcctccctg
ggtgaggccatgaaggtggtacagagcagcaaggccttctctcaccccgccaactgggca
ggtttcacactcatcgggagtgatgtcaagctgaacagcccctcgtcgctcgtcggccag
gcgctcacggagatcctgcagcacccggagcgagcacgggacgccctgcgtgtgctgctg
cacctggtggagaagtccctgcagcggatccagaatggacagcgcaacgccatgtacaca
tcgcagcagagcgtcgagaacaaagtgggtggcatccctggctggcaggctctcctcact
gcagtgggcttccggctggaccctgccaccagtgggctgccggcagctgtcttttttcca
acctcagacccaggcgacaggttgcagcagtgcagcagcactctccaggccctgctgggt
ctgcccaacccagccctccaagcactgtgcaagctcatcacagcctcagagacaggcgag
cagctcatcagccggctccatcaggtgctggttcagctgcaggcgtgcgagaaggaacag
gactttgcctcagctcccatccctgtctccctcagtgtccaactgtggcggctcccagga
tgtcatgagttcctggcggctcttgggtttgacctgtgtgaagtgggccaagaggaagtg
atcctgaaaaccgggaaacaggctagtcggcgcaccacccactttgctctccagtccctg
ctgtcactcttcgattccaccgagctccccaagcgcctcagcctggacagctcatcctcc
ctggagtccctggcgtcggcacagtccatgtccaacgctctgcccttgggctcccagcac
ccccctttctcgcccactggggcagacagcattgcctccgacgccatctccgtgtacagt
ctcagctcaattgcctcctccatgagttttgtctccaagccggaggggggtttggaaggc
ggaggtccccgaggacgacaggactacgataggtccaagaacacccacccacaacgagcc
accctgccacggcgccagatgtccccccaggccagacgcggggccagcaaagaagaagaa
gaatacgaggggttctctatcatcagcatggagcctctgtcagcctaccaaggcgagggg
aagacacgcttctccccagaccccaagcaaccgtgcgtcaaggcaccgggtggtgtgagg
ctttcagtcagctccaagggaagtgtcagcacgcccaactcccctgtgaagatgaccctg
atccccagcccaaactctcccttccagaaagtgggtaagctggcaagctcagacacaggt
gagtcggaccagtccagcacggagaccgacagcactgtgaagtcccaggaggagagcact
ccaaagctggacccccaggagttggcccagaggatcctagaggagaccaaaagccacctc
ctggcagtagagcgccttcagagaagtggtggccccgccggctctgaccgagacgatggc
gtggtagcgcccagcagcaccacagtcttcagggcctcagagaccagcgccttcagcaag
cctatcctctctcatcagaggagccagttgtcaccgctcactgtcaaaccccagccccca
gccaggagctcatcccttcccaaggtgagcagccctgccacatcagaggtgtcgggcaag
gatggcctgagccctcccggcagcagccacccatcgcctggccgtgacaccccagtctcc
ccggcagacccgccactcttcagactcaagtaccccagctctccttacagcgctcacatt
tccaagtccccccggaacgcgtcccctgcgtgcagcgcaccatctccagcgctctcatac
tcttcagcgggctctgctcgctccagtccagctgatgcccccgacgagaaggtgcaggct
gtacacagcctcaagatgctctggcagagcacaccccagcccccgaggggcccccggaaa
atatgtcgaggtgcaccgggaaccttgacatcaaaaagagatgtcctcagcctgctaaat
ctgtcccctcggcatggcaaggaggagggtggggtggacaggctggaactgaaggagctg
tctgtgcagccatgtgacgaggtgctacccaaagttcccaccaatggccactggtgcaca
gatacagcaaccctgacaacccccagtggttgcaacccaacagctgccgccacgcgccct
ctgagacttcccttggccaacggttacaagttcctgtccccaggacggctcttcccttcc
tccaaatgttaa
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integrated database retrieval system
