Apodemus sylvaticus (European woodmouse): 127673390
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Entry
127673390 CDS
T10613
Symbol
Gigyf1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127673390 (Gigyf1)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127673390 (Gigyf1)
Surveillance factors
Other surveillance factors
127673390 (Gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Rrn6_K-rich
PRTase_3
Motif
Other DBs
NCBI-GeneID:
127673390
NCBI-ProteinID:
XP_052025077
LinkDB
All DBs
Position
22:complement(31816830..31833682)
Genome browser
AA seq
1066 aa
AA seq
DB search
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLADYRYGREEMLALYVKDNKVPEEL
QDKEFAAVLQEDPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGPPLAAASRGRGS
TRSRGRGRGDSCFYQRSTEEGDGAFGRNPREIQRSQSWDDRGERRFEKPARRDGVRSGFE
EGGAGPRKEHARSDSENWRSLRDEQEDDSSWRLGAGPRRDGDRWRSSSPDGGPRSAGWRE
HGERRRKFDFDLRGERGGCGEEDGRVGGGTSQLRRCRGLDGFEDDKDGLPEWCLDDEDEE
MGTFDASGAFLPLKKGPKEPIPEEQELDFQGLEEEEEEPSEGADEEGPEAGGKEAAPLPP
PEKSSPPSSLPALGPLWTANEEGSEAVETELPPAEGDEVRGLSLSPRLSSPPGPPGDLED
EEGLKHLQQEAEKLVASLQDSSLEEEQFTAAMQTQGLRHSTAATALPLSHGAARKWFYKD
PQGEIQGPFTTQEMAEWFQAGYFSMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPP
LLGNMDQERLKKQQELAAAALYRQLQHQHFLQLVGSRQLPQCTTLREKAAMGDLTPPQQQ
QLTTFLQQLQALKTPRGGDQNLLPTMSRSLSVPDSGPLWDLHTSASPQSGGEASLWDIPI
NSSTQGPILEQLQLQHKLQERREAELRAKREEEERKRREEKRRQQQQQEEQKRRQEEEEL
FRRKQVRQQELLLKLLQQQQATNVPVPPAPSSPPPLWAGLAKQGLSMKTLLELQMESERQ
LHKQPAREPLRAQAPNHRVQLGGLGSAPLNQWVSEAGPLWGGPDKSGGSGSGNLGLWEDT
LKSGGSLARSLGLKNSRSSPSLSDSYSHLSGRPVRKKTEEEEKLLKLLQGIPRPQDGFTQ
WCEQMLHTLSTTGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERRAK
QKASQQRQQQQQQQQQQQQQEAWLSSSSLQTAFQANHSTKLGPGEGSKAKRRALMLHSDP
SILGECRWAWEALLSPHGLGELTHFSLASGYALHGPSGEIESVDDY
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagacactcaactttgggcctgagtggctgagggccctttcgagtggtggc
agcgtggcctctccgcccccatctcctgccatgcccaagtacaagctggcagattaccgc
tatgggcgagaggagatgctggccctctatgtcaaggacaacaaggtcccggaggaacta
caggacaaggagtttgctgcagtgttacaggaggatccactgcagcctctggctctggaa
cctctgactgaggaggagcagagaaacttctcgctgtcggtgaacagtgtggctgtgctg
aggctgatggggaaaggggcagggccccctttggccgccgcctcccgtggcaggggcagc
actcggagccgagggcgaggccgtggcgacagctgcttttaccaaagaagcactgaggaa
ggcgacggggcctttggaaggaatcctcgggagatccagcgaagccaaagctgggatgac
agaggtgagcggaggttcgagaagcctgcaaggagagatggagtgcgatctggctttgag
gagggcggggctggcccgaggaaggagcacgcacgctcagacagcgagaattggcgctcc
cttcgagatgagcaagaggatgacagcagctggagactcggggcaggaccccggcgagat
ggtgaccgctggcgttccagcagccctgatggtggtccccgctctgctggctggcgggag
catggggagcggaggcgcaagtttgattttgatttgcgaggggagcgcggagggtgtggt
gaagaagacgggcgggtcgggggtggcacctctcagctccggaggtgccgggggctcgat
ggctttgaggatgacaaggatgggctcccagagtggtgcctggatgacgaggatgaggag
atgggcacgttcgatgcctccggagccttcctgcctcttaagaagggccccaaggagcct
attcctgaggagcaagagcttgatttccagggcctggaggaagaggaagaggagccgtca
gaaggggcggatgaggaggggcccgaggcaggagggaaggaagcggccccgttgcctcct
ccagagaaatcaagccccccgtcttcactgccggccttgggccctctctggacggcaaat
gaggagggtagtgaggcggtggagacagagctgccccccgctgaaggagatgaggtgagg
ggactgtctctaagtcctagactcagttcgcctcctggcccacctggagatctagaagat
gaagaaggcttgaagcacttgcaacaggaggcagagaagctggtggcctccctgcaggac
agctccctggaggaggagcagttcaccgctgccatgcagacccagggcctgcgccactcc
acagctgccactgcccttcccctcagccatggcgccgcccggaagtggttctacaaggac
ccacagggggagatccaaggtccgttcacgacgcaggagatggcggagtggttccaggct
ggctacttctccatgtccctcttagtgaagaggggctgtgacgagggtttccagcctctg
ggagaggtgatcaagatgtggggccgtgtgccctttgccccagggccctcgccacccccg
ctgttggggaacatggatcaggagcggctgaagaagcagcaggagctggccgccgcagcc
ctgtaccggcagctgcagcaccagcactttctgcagctggttggcagccgccagctcccg
cagtgtacaacgctccgggaaaaggcagctatgggggacctgacgccgccgcagcagcaa
cagctcacaacgttcctgcagcagctccaggctctcaaaacccccagaggtggggaccag
aacctgctcccgacgatgagccggtccttgtcggtgccagattcaggccccctctgggac
ttacatacctcagcttcaccacagtccggtggtgaggccagtctttgggacatacccatt
aactcttcgactcagggtccaatcctagaacagctccagctgcagcataaactccaagag
cgcagagaagcggagctcagggcaaagcgggaggaggaggagcgcaagcgccgcgaggaa
aagcgtcgccagcagcagcagcaggaggagcagaagaggcggcaggaggaggaggagctc
ttccggcgcaagcaggtgcggcagcaggaactgttgctgaagctgttgcagcagcagcag
gcaacgaatgtccctgtgcccccggcccccagctccccacccccactctgggccggccta
gccaagcagggtctgtccatgaagacgctgctggagctgcagatggagagtgagcgccaa
ctgcacaagcagccggcccgggagcctctgcgggcccaggcccccaaccaccgcgtgcag
cttgggggcttgggctctgcccctctgaaccagtgggtgtctgaggctgggccactatgg
ggcgggccagacaagagtgggggcagcggcagtggcaacctgggactctgggaagatacg
ctgaagagcggcgggagcctggcccgaagcctgggcctaaagaacagtcggagcagcccg
tctctcagtgactcctacagccacctgtcaggccggcccgttcgcaaaaagacagaagag
gaggagaagctgctgaagctgctgcagggcatcccccggccccaggacggcttcacgcag
tggtgtgagcagatgctgcacacgctaagcaccacaggcagcctggacgttcccatggct
gtagcaatcctcaaggaggtggagtccccttatgatgtccacgattatattcgctcctgc
ctgggggacacgctggaagccaaagaatttgccaaacaattcctggagcggcgggccaag
cagaaagccagccaacagcggcagcagcagcagcagcagcagcagcagcagcagcagcag
gaggcctggctgagcagctcctccctacagacagcctttcaggccaatcacagcaccaaa
ctgggccctggggagggcagcaaggccaagaggcgggcgctgatgcttcactccgacccc
agcatcttgggtgagtgtcggtgggcctgggaagctctgctctccccacacggcctaggt
gagctcactcacttctccctggcttcagggtacgccctgcacggcccttccggtgagatc
gagagcgtggatgactactga
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