KEGG   Apodemus sylvaticus (European woodmouse): 127673398
Entry
127673398         CDS       T10613                                 
Symbol
Usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    127673398 (Usp30)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:asyl01002]
    127673398 (Usp30)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asyl04131]
    127673398 (Usp30)
   04121 Ubiquitin system [BR:asyl04121]
    127673398 (Usp30)
Enzymes [BR:asyl01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     127673398 (Usp30)
Peptidases and inhibitors [BR:asyl01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   127673398 (Usp30)
Membrane trafficking [BR:asyl04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    127673398 (Usp30)
Ubiquitin system [BR:asyl04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    127673398 (Usp30)
SSDB
Motif
Pfam: UCH UCH_1 DUF5700
Other DBs
NCBI-GeneID: 127673398
NCBI-ProteinID: XP_052025106
LinkDB
Position
22:complement(55005087..55029536)
AA seq 517 aa
MLSSRAQAARTAADKALQRFLRTGAAVRYKVMRNWGVIGGIAAALAAGIYVIWGPITERK
KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFVKWLEEFTTQYSRDQQGLHTHQCLSLTL
LSLLKALSCQEVTEDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ
PRVTHLFDVHSLEQQSEMAPRQVTCHTRGSPHPTTNHWKSQHPFHGRLTSNMVCKHCEHQ
SPVRFDTFDSLSLSIPAATWGRPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEK
VEDQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDFYKYRLLG
RRPSQHGPKATENPGSALEAQDTQAAPKPGLSQPGAPKTQIFMNGACSPSLLPTLPSPMA
FPLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSAKNPLSTSNQWLWISDDT
VRKASLQEVLSSSAYLLFYERVLSRVPQQGREYRSEE
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgctgagttcccgggcgcaggcggcgaggacggcggccgacaaggccctccagcgcttc
ctgcgcaccggggcggccgtcagatacaaagtcatgaggaactggggagtgatcggcgga
attgctgctgcccttgcagcgggaatctatgtgatctggggtcccattacagagaggaag
aagcggcgaaaagggcttgtgcctggccttgtcaacttggggaacacctgcttcatgaac
tcgctgctgcagggcctgtctgcctgccctgcgtttgtcaagtggctggaagagtttacc
acccagtactccagggaccagcaggggctgcatacgcaccagtgcctgtccttgacgctg
ctgagcctcctgaaagctctgtcctgccaggaggtcaccgaggacgaggtcctggacgcc
agctgcctgctggacgtcttgaggatgtaccgatggcagatctcgtcctttgaggagcag
gatgctcatgagctgttccatgtcatcacctcatcgctggaggacgaacgggaccgccag
cctcgcgtcacccacctgtttgatgtgcattccctggagcagcagtcagaaatggctccc
agacaagtcacctgccacacgagagggtcccctcaccccacgaccaatcactggaagtct
cagcaccctttccacggaagactcaccagtaacatggtgtgcaagcactgtgagcaccag
agccctgtccggtttgacacctttgacagcctttccctcagtattccagctgccacttgg
gggcgcccgctgacactggaccattgtcttcaccacttcatctcatccgagtccgtgcgg
gacgtggtctgtgacaactgtacaaagattgaagcgaaggggacactgaacggggagaag
gtggaggaccagaggaccacgtttgttaagcagttaaaactagggaagctgccacagtgc
ctctgcatccacctgcagcggctcagctggtccagccacggcacgcccttgaagcggcat
gagcatgtgcagttcaacgagtttctgatgatggacttctacaagtaccgcctcctggga
cgcagacccagccagcatggccccaaagccactgagaacccagggtctgccctggaagca
caggacacgcaggcagccccaaagccaggtctgagtcagccaggggctcccaagacacag
atctttatgaatggcgcctgctccccatcgttgctgccgaccctgccttcccccatggcc
ttccctctgccggtggttcctgactacagctcctccacgtacctcttccgcttgatggca
gttgtcgtccaccacggagacatgcactctggacacttcgtcacctacagacggtcacct
ccttctgccaagaaccctctctcaaccagcaaccagtggctgtggatttccgacgacacc
gtccgcaaggccagcctacaggaggtcctgtcctccagtgcctacctgctgttctatgag
cgagttctgtcccgcgtgccgcagcagggccgagagtatcggtctgaggagtga

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