Apodemus sylvaticus (European woodmouse): 127673542
Help
Entry
127673542 CDS
T10613
Symbol
Hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03015
mRNA surveillance pathway
asyl05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127673542 (Hbs1l)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
127673542 (Hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127673542 (Hbs1l)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127673542 (Hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
127673542
NCBI-ProteinID:
XP_052025175
LinkDB
All DBs
Position
23:complement(12234868..12308131)
Genome browser
AA seq
680 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDNPEEDCAYEDLREP
SNSLLNHQLSEIDQARLYSCLDHMREVLGDAVPDDTLTEAILRHKFDVQKALSVVLEEGV
QTGKEKTERAVCAGQPSKGKSVISRSSQSESEIVSKVAKMTISGKKQTMGFEVPGLTSEE
NGHSVCGPHKGPPPGDDVSVASNAPETGTPKSALPPPSIQTEELGSTPAPVRKPGKLRQQ
IDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGK
ASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADV
AVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITGK
LGHFLKQAGFKESDVAFIPTSGLSGENLTTRSQASDLTKWYKGLCLLEQIDSFKPPQRSI
DKPFRFCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAVPPNETCTAKGITLHDEPVDWA
AAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEVPITKGFPVLLHY
QTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGR
FMLRYGGSTVAAGVVTEIKE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaacgtccggggctataactacgatgaagattttgaagatgatgat
ttgtatggccagtctgtggaggatgattattgtatttcaccatcaacagctgctcagttt
atttactcgcggcgtgacaaccctgaagaggactgtgcttacgaagatctgagagagcct
tctaattctcttctgaatcaccaattgagtgagattgatcaagctcgcctttattcatgc
ctcgatcacatgagagaggtgctgggggacgccgtgcccgatgacacactgactgaggca
attctgagacacaagtttgatgtgcagaaggctttgtctgtggtcctggaagagggcgtg
cagactgggaaggagaagacggagcgagcagtgtgtgcaggacagccttcgaaaggaaaa
tcagttatatctcggtcatcccagagtgaatctgaaattgtgtcaaaagttgctaaaatg
accatatccgggaagaagcagaccatgggatttgaagtgcctggcttaacttctgaggaa
aatggacacagtgtgtgtggtcctcacaaaggacctcctccgggtgatgatgtgagcgtc
gcttctaatgctcctgagaccggcactccgaaatccgccctcccacctccctccatccaa
acggaagagctgggctccactccggccccagtgagaaagcctggcaaactgaggcagcag
atagatgtgaaagcagagttggagaagcggcagggcgggaagcagctcctcaacctggtg
gtcatcggtcatgttgacgctgggaaaagcactctgatgggccatttgctttaccttctg
ggtaacgtaaacaaaagaactatgcataagtatgagcaggagtctaaaaaggctggcaag
gcttcatttgcatatgcatgggtcttggatgaaactggagaagaaagggaaaggggtgtc
acaatggatgtaggcatgacgaagtttgaaaccaccaccaaagtgattaccctaatggat
gctcccggccataaggatttcattccaaacatgatcacaggagcagcccaggccgatgtc
gctgtcttggtcgttgatgccagcagaggagagtttgaagctggatttgagacgggagga
cagacccgagagcatggccttttggtccgatctcttggagtgacacagcttgctgtggct
gtcaataaaatggatcaggtaaattggcaacaagaaagatttcaagagataactggaaaa
cttgggcattttctcaagcaagcaggttttaaggagagtgacgtagcttttatcccaacg
agcggtctgagtggtgagaatttaaccacaaggtcacaggccagcgacctcacgaagtgg
tacaaagggctgtgcttgttggagcagattgattccttcaagccccctcagcgctctatc
gacaaaccttttagattctgtgtgtctgacgtcttcaaagatcaaggctctggcttttgt
gtgactggtaaaattgaagctggttatatccagactggggaccgtctgttagctgtgccg
cccaatgagacctgcactgctaaagggatcactctgcacgacgaacctgtcgactgggca
gcagcaggcgaccacgttagcctcactttggtcgggatggacatcatcaaaatcaatgtc
ggctgcatattttgtggccccaaggaacccattaaggcttgcacccgcttcagagcccgg
atcctcatcttcaatattgaagttcctatcactaaagggtttcctgtgctgttacactac
caaaccgtcagcgagcctgctgttattaagagattgattagcgtcctaaacaaaagtact
ggtgaagtcacaaagaagaagcccaagctgctgaccaagggccagaacgccctggtggag
cttcagacacaaagaccggtggcccttgagctctacaaagacttcaaggagctggggcgg
tttatgctgcggtacggcggctccacggtagccgccggtgtcgtcactgagataaaagag
tga
DBGET
integrated database retrieval system
