Apodemus sylvaticus (European woodmouse): 127674174
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Entry
127674174 CDS
T10613
Symbol
Chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asyl03021
]
127674174 (Chd1)
03036 Chromosome and associated proteins [BR:
asyl03036
]
127674174 (Chd1)
Transcription machinery [BR:
asyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127674174 (Chd1)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
127674174 (Chd1)
SLIK complex
127674174 (Chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
127674174
NCBI-ProteinID:
XP_052025994
LinkDB
All DBs
Position
23:49617241..49679891
Genome browser
AA seq
1704 aa
AA seq
DB search
MNGHSDEESVRNGSGESSQSEDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSDSGS
QSESESDTSRENKVQAKPPKVDGAEFWKSNPSILAVQRSAMLRKQPQQTQQRAASSNSGS
EEDSSSSEDSDDSSRDVRRRKHNDEDWQMSGSGSPSQSGSDSESEEEREKSSCDGTESDY
EPKNKVRSRKPQNRSKSKNGKKILGQKKRQIDSSEDEDDEDYDNDKRSSRRQATVNVSYK
EDEEMKTDSDDLLEVCGEDVPQTEDEEFETIERFMDCRVGRKGATGATTTIYAIEADGDP
NAGFEKNKEPGDIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWL
KNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSW
EDGALISKKFQTRIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRD
YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT
SWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFL
GGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE
KFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQK
QYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL
IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELR
RQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ
KKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKE
ELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEAGPLTVGDELLSQFKVAN
FSNMDEDDIELEPERNSKNWEEIIPEEQRRRLEEEERQKELEEIYMLPRMRNCAKQISFN
GSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG
PLERLDAIARDAELVDKSETDLRRLGELVHNGCVKALKDSSSGTERAGGRLGKVKGPTFR
ISGVQVNAKLVIAHEDELTPLHKSVPSDPEERKRYTIPCHTKAAHFDIDWGKEDDSNLLI
GIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRGLAKKQAQ
RPSGAGGSKRRKTRAKKNKAMKSIKVKEEVKSDSSPLPSERSEEDDEKVNDAKPESKDRP
KKSVASDAPVHITASGEPVPITEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSER
EQLEHTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAI
KKRQESQQNSDQNSNVTTTHVIRNPDMERLKETTNHDDSSRDSYSSDRHLSQYHDHHKDR
HQGDAYKKSESRKRPYSSFSNGKDHREWDHYRQDSRYYSDREKHRKLDEHRSREHRPSLE
GSVKDRCHSEHRSHPDHRSGPEHSHHKSSRDYRYLSDWQLDHRAASSGPRSPLDQRAPYG
SRSPFEHSSEHRSTPEHTWSSRKT
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttaggaacggcagcggagagtcaagtcagtca
gaagatgattctgggtcagcatcaggctctggatctggctcgagttctggcagcagcagt
gatggaagcagcagccagtctgggagcagcgactctgactctggttctgactcaggaagt
caatcggagtctgaatcagatacatcccgagagaacaaggttcaagcaaaaccacccaaa
gttgatggagctgagttttggaaatccaaccccagtattctggctgtgcagagatctgcc
atgctcaggaagcagccacagcagacccagcagcgtgcagcctcgtccaacagtgggtcc
gaggaggactcctctagcagcgaagactcagatgactcgtcccgggacgtcaggaggaga
aagcacaacgatgaagactggcagatgtctgggtctggatctccatctcagtctggttca
gactcagaatctgaggaagagagagagaaaagcagctgtgatgggacagagtctgattat
gagccgaaaaacaaagtcagaagcagaaagcctcagaatagatctaagtcaaaaaatggg
aaaaaaattcttggacaaaaaaagcgacagattgattcgtctgaggatgaagatgacgaa
gattacgacaatgacaaacgcagctctcgccgccaggccactgtcaacgtgagctacaag
gaggacgaggagatgaaaactgactccgatgacctgctggaggtctgcggagaggacgtc
ccacagacggaggacgaggagttcgagacgatagaaaggtttatggattgcagagtgggc
cggaaaggagctactggtgctactacaaccatttatgctattgaagcagatggtgaccca
aatgcaggatttgaaaaaaacaaggagccaggagacattcagtatttaattaagtggaaa
gggtggtctcacatccacaacacgtgggagacggaggaaacactgaagcagcagaacgtc
agagggatgaaaaaactggataattataagaaaaaagatcaggagacaaaacgatggctg
aaaaatgcttctccagaagatgtggaatattataattgccagcaagaattgacagatgat
ctacacaaacagtatcagatagtggagcgcataattgctcattccaatcagaaatcagca
gctggtcttcctgattattattgcaaatggcagggccttccatactctgaatgcagctgg
gaggacggagctctcatttccaaaaagttccagacacgcatcgatgaatattttagcagg
aatcagtcaaaaacgacaccttttaaagattgcaaagtattgaaacaaagaccaagattt
gtagctctgaagaaacagccatcctatattggaggacatgagggtttagaattgagagac
tatcagctgaatggtttaaactggcttgctcactcttggtgcaaaggaaatagttgcatc
cttgctgatgaaatgggccttgggaaaacgatacagacgatctcgtttttgaactacctg
ttccatgagcatcagttgtacggaccttttctcctggttgtcccactctccaccctgacc
tcctggcagagggagattcagacgtgggcgtctcagatgaatgctgtagtttatttaggt
gacattaacagcagaaacatgataagaactcatgaatggatgcatccccagaccaaacgg
ttaaaatttaatatacttttaacaacgtatgaaattttattgaaggataaggcattcctt
ggtggtctgaactgggcatttataggtgttgatgaagcacatcgattgaaaaatgatgat
tcccttctgtataaaactttaattgattttaaatctaatcaccgtctcctaatcactgga
actcctctacagaactccctgaaagagctctggtcattgctgcatttcattatgccagag
aagttttcttcttgggaagactttgaagaagaacatggcaaaggcagggagtatggctac
gccagcctccacaaggagctcgagccctttctgctacgcagagttaagaaagatgtggaa
aagtctcttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacagaaa
caatattacaaatggattttaactaggaattacaaagccctcagcaaaggttccaagggc
agtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgctac
ctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacactta
atccgtagcagcggcaaactcattcttctagacaagctgttgattcgactgagagaaaga
ggcaaccgagtgctcattttctctcagatggtgcggatgttagatatacttgcagaatat
ttgaagtaccgccaattcccctttcaaagattagatggatcaataaaaggggagctgagg
agacaggctctagatcatttcaatgccgagggctcagaggacttctgctttctgctgtcc
acgcgggctgggggtttgggcattaacttggcttctgccgacactgtcgttatattcgac
tccgactggaatccacagaacgatctgcaggctcaggcaagagctcatcgaattgggcag
aagaaacaggtgaatatatatcgcttggttacaaagggatcagttgaagaagatattctt
gaaagggccaaaaagaaaatggtattggatcatcttgtgattcaaagaatggacaccact
gggaagacggtgttgcacacaggctcggctccatcaagttccacccccttcaataaagag
gagttgtcagccatcttaaaattcggcgctgaggagcttttcaaggagcctgaaggggag
gagcaggagccccaggagatggatatagatgagatcctgaagagagccgagactcacgag
aatgaggcgggcccgctgacggtcggggacgagctgctctcccagtttaaggttgccaat
ttttcaaacatggatgaagatgacattgaattggaacctgaaagaaattcaaagaactgg
gaggagatcatcccagaagagcagagacggaggttagaagaggaggagaggcagaaggag
ctcgaggagatctacatgctcccgagaatgaggaactgcgcaaagcagataagtttcaat
ggaagtgaaggaaggcggagtagaagcaggagatattcgggatctgatagtgattcaatc
tcagaaaggaaacggccgaagaaacgtgggagaccacgcaccatccctcgggagaatatt
aaaggatttagtgatgcagaaattaggcggtttatcaagagctataagaaattcggtggc
cctctggagaggttagatgcgattgctcgagatgctgaattggttgataagtcagaaaca
gatctcagaagactaggagaactggtacataatggttgtgtcaaagctttaaaagacagt
tcttcaggaacagagagagcaggtggcagacttggaaaagtgaaggggccaacgttccgg
atctccggagtgcaggtgaacgccaagctggtgattgcgcacgaggacgagctgactccg
ctgcacaagtctgtcccttcggacccggaggagcgcaagaggtatacaatcccatgccat
acaaaggctgctcactttgatatagactggggcaaagaagatgactctaatttgctaatt
ggtatctatgaatatggctatggaagctgggaaatgattaaaatggatccagacctcagt
ttaacacacaagattcttccagatgatcctgataaaaaaccacaagcaaaacagctgcag
acgcgcgccgactacctcatcaagctgctcagcaggggtctggcaaagaagcaggctcag
aggccttcgggtgcaggaggttcaaagaggagaaaaacaagagctaaaaagaataaagca
atgaagtccatcaaagtaaaagaggaggtgaagagcgactcgtcgcccctgccttcggag
cggtctgaggaggatgacgagaaggtgaacgacgccaagcctgaaagtaaagaccggccc
aagaagtctgttgcgtccgacgctcctgtccacatcactgcaagtggagagccggtcccc
atcactgaggagtccgaggagctggatcagaagacattcagtatttgtaaagaaagaatg
agaccggtgaaagcagctttgaaacagcttgataggcctgagaaaggcctgtcagaaaga
gagcagctggagcacaccagacagtgcttaatcaagatcggagaccacatcaccgagtgc
ttgaaggagtattccaaccctgagcagattaagcagtggagaaaaaacctgtggattttt
gtatctaagtttactgagtttgatgcaaggaaattacataaattatataagcatgctatt
aaaaaacgacaagaatctcagcaaaacagtgaccagaatagcaatgttactaccactcat
gtgattaggaatccagatatggaaaggttaaaagagactacaaatcacgatgacagtagc
agggacagctattcttctgacagacacttatctcagtaccatgaccatcacaaggaccgc
catcagggagacgcttataaaaagagcgagtctcggaagagaccgtactcctcttttagc
aacggcaaagaccatcgcgagtgggatcactacaggcaggacagcaggtactatagtgac
agagagaaacacagaaaactggatgagcacaggagccgagagcacaggccgagcttggaa
ggcagtgtgaaggacaggtgtcactctgagcaccgatctcacccggaccatcgctcgggc
cccgagcactcgcatcacaaatcctccagggactataggtatctctcagattggcagctg
gaccaccgagctgccagcagcggccctcggtcacctttagatcagagggctccgtatggc
tccaggtccccgtttgaacattcatctgaacacagaagtactcctgaacacacctggagt
agtcggaagacataa
DBGET
integrated database retrieval system
