Apodemus sylvaticus (European woodmouse): 127674616
Help
Entry
127674616 CDS
T10613
Symbol
Cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127674616 (Cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127674616 (Cnot3)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127674616 (Cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127674616 (Cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
127674616
NCBI-ProteinID:
XP_052026268
LinkDB
All DBs
Position
1:complement(192170220..192185862)
Genome browser
AA seq
752 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYPSGPPPATSALSSTPGNNGASTPAAPTSALGPKASP
APSHNSGTPAPYAQAVAPPNASGPSSAQPRPPSAQPSGGSGGGSGGSSSNSNSGTGGGAG
KQNGATSYSSVVADSPAEVTLSSSGGSSTSSQALGPTSGPHNPAPSTSKESSSTAPSGAG
SVASGSGNNSGGPSLLVPLPVNPPSSPTPSFSEAKAAGTLLNGPPQFSTTPEIKAPEPLS
SLKSMAERAAISSGIEDPVPTLHLTDRDIILSSTSAPPTSSQPPLQLSEVNIPLSLGVCP
LGPVSLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVE
FYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQ
GTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgaa
ggtgtggagcagtttgaagatatttggcaaaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcatccaatgagatcaaggacaaaaggcagctcattgaaaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcttatagcaaggaaggtctgggtctggctcagaaagtggaccctgcccagaaagag
aaggaagaagttggccagtggctcacgaacaccattgacaccttaaatatgcaggtggac
cagtttgagagtgaagtggagtcactgtcggtacagacacgcaagaagaaaggcgacaag
gatcagaagcaggaccggattgagggcttgaagcggcacatcgagaagcaccgataccac
gtacgtatgctggagaccatcctgcgcatgctggacaatgactccatcctggttgatgcc
atccgcaagatcaaggacgatgtggagtactacgttgactcatcccaggaccccgacttt
gaagagaatgaattcctctatgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggacgagatcttcaaccagtctagcagt
acacccacctcaacaacctccagctctcccatcccacccagcccagctaactgcactacg
gagaactctgaagatgataagaagagaggccgctcgacagatagtgaagtcagccagtct
ccagccaaaaatggctccaagcctgtccacagcaaccagcacccccagtccccagctgtg
ccgcccacctacccctctggccccccacctgccacttctgccttgagctccacccctggc
aacaatggggcctctaccccagcagcacctacaagtgccctgggccctaaggccagtcca
gctcccagccacaactcgggtactcctgccccctatgcccaggctgtggccccacccaat
gccagcgggcccagcagtgcccagccccggccccccagtgcccagccaagcgggggaagt
ggtggtggcagcggagggagcagcagcaatagtaacagtggcacaggcggaggggctggc
aagcagaacggtgccaccagctatagttcggttgtggcagacagccctgcagaggtgacc
ctaagtagcagtgggggcagcagtaccagcagccaagccctggggcccacctcgggccct
cacaacccagctcccagcacctcaaaggaatccagttcaacagccccatcaggggctggg
agtgtggcttcaggctcagggaacaactcagggggacccagcctcctggtgccactgcct
gtaaatccccccagttctccaacgcccagcttcagtgaagccaaggcagctggtaccctg
ctcaatggtcctccacagttcagcaccaccccagaaatcaaggcccctgaacctctgagc
tctctgaaatccatggcagaacgggcagccatcagctctggtattgaggaccctgtgcca
acgttacacctaactgatcgagacatcatcctgagcagcacatcagcaccacccacctca
tcccagccgcccctgcagctgtcagaggtgaacataccgttgtctctgggcgtctgtcca
ctggggccagtgtccctcaccaaggagcagctataccagcaggccatggaagaggctgcc
tggcatcatatgccccacccctctgactccgagcgcattcggcagtacctcccccggaac
ccttgcccgacacccccctaccaccaccagatgccacccccacactcggacactgtggag
ttctaccagcgcctgtcgactgagacgctcttcttcatcttctactatctggagggaacc
aaggcccagtacttggcagccaaggccctaaagaagcagtcctggcgattccacaccaag
tacatgatgtggttccagaggcatgaggagcccaagaccatcacagatgagtttgagcag
ggcacctacatctactttgactacgagaaatggggccagcggaagaaggaaggcttcacc
tttgagtaccgctacctggaggaccgggacctccagtga
DBGET
integrated database retrieval system
