Apodemus sylvaticus (European woodmouse): 127674999
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Entry
127674999 CDS
T10613
Symbol
Trim28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
asyl01001
]
127674999 (Trim28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127674999 (Trim28)
Enzymes [BR:
asyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127674999 (Trim28)
Protein kinases [BR:
asyl01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
127674999 (Trim28)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127674999 (Trim28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
PHD
zf-RING_UBOX
zf-C3HC4
PHD_2
PHD-1st_NSD
zf-RING_2
YaaC
Motif
Other DBs
NCBI-GeneID:
127674999
NCBI-ProteinID:
XP_052026842
LinkDB
All DBs
Position
1:complement(199847622..199854257)
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AA seq
835 aa
AA seq
DB search
MAASAAAATAAASAATAASAASGSPGSGEGSAGGEKRPAASSAATASAAASSPAGGGGEA
QELLEHCGVCRERLRPERDPRLLPCLHSACSACLGPATPAAANNSGDGGSAGEGATVDCP
VCKQQCYSKDIVENYFMRGSGSKASSDSQDANQCCTSCEDNAPATSYCVECSEPLCETCV
EAHQRVKYTKDHTVRSTGPAKTRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHK
DHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKMA
ILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNN
TALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNST
GPGPMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSDDPYSSAEPHVSGMKRSRSGEGEVS
GLMRKVPRVSLERLDLDLTSDSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQAGTVPP
GAPGAPPLPGMAIVKEEETEAAIGAPPAAPEGPETKPVLMALTEGPGAEGPRLASPSGST
SSGLEVVAPEVTSAPVSGPGILDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDV
PGEEWSCSLCHVLPDLKEEDGSLSLDGADSTGVVAKLSPANQRKCERVLLALFCHEPCRP
LHQLATDSTFSMEQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDK
ADVQSIIGLQRFFETRMNDAFGDTKFSAVLVEPPPLNLPSAGLSAQELSGPGDGP
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcgactgcggcggcctcggccgcgacggccgcctcagcg
gcctctggtagcccagggtcgggcgagggctcggcgggcggtgagaagcgtccggccgcc
tcttcggccgcgacggcctctgcggccgcgtcgtcccctgcggggggcggtggcgaggcg
caggagcttctggagcactgcggcgtgtgtcgcgagcgcctgcgacctgagcgggaccct
cggctgctgccctgcctgcattcggcctgtagtgcctgcctgggccccgctacacccgcc
gcagcgaataattcgggggatggcggctcggcgggcgaaggcgctacggtggattgtcca
gtgtgcaagcagcagtgctactccaaagacatcgtggagaattattttatgcgtggtagt
ggcagtaaggcctcttctgactcccaggatgctaaccagtgctgcactagctgtgaagat
aatgccccagccactagctattgtgtggagtgctctgaaccactttgtgagacctgtgtg
gaggctcaccagcgggtgaaatacaccaaggaccacaccgtgcgctccactgggcccgct
aagacccgagatggagaacgaacagtctattgtaatgtgcacaagcatgaaccccttgtg
ctgttttgtgagagctgtgacactctgacatgccgggactgccagcttaatgctcacaag
gaccatcagtaccagttcttggaagatgcagtgaggaaccaacgtaaactcttggcttca
ctggtgaaacgccttggggacaaacatgccacactgcagaaaaacaccaaggaggttcga
agctcgatccgccaggtgtctgatgtgcagaagcgagtacaggttgatgtcaagatggcc
attctgcagatcatgaaggagctgaataagcggggccgagttctggtcaacgatgcccag
aaagtgactgagggtcagcaagaacgtctggagcgccagcactggaccatgaccaaaatt
cagaagcaccaggagcacattttgcgctttgcctcttgggctttggagagtgataacaat
acagctctcttgctttctaagaagctgatctatttccagctgcatcgggccctcaaaatg
attgtggaccctgtggagcctcatggtgagatgaagtttcagtgggatctcaatgcctgg
accaagagtgctgaagcctttggtaagattgtggctgagcgtcctggtacgaactccaca
ggtcctgggcccatggctcctccaagagccccaggccctcttagcaagcaaggttctggc
agtagtcagcccatggaggtacaagagggctatggctttgggtcagatgatccctactca
agtgcagagccacatgtatcaggcatgaagcggtcccgctctggtgagggagaggtaagt
ggcctcatgaggaaggtgccacgcgtgagccttgaacgcctggatctggatctcacctct
gatagccagccaccagtcttcaaggtctttcctggaagcactactgaggactacaatctg
attgttattgaacgtggtgctgctgcagcagctgctggtcaggctgggactgtgccacca
ggagcccctggtgccccaccccttcctggcatggccattgtcaaggaagaagagacagaa
gctgctattggagccccccctgctgcccctgagggtcctgaaaccaagcctgtgttgatg
gctctgactgaaggtcctggtgctgagggacctcgtctagcttcacctagtggcagtacc
agctcaggcttggaggtggtggctcctgaggttacctcagccccagtaagtgggccaggt
atcctggatgacagtgccactatctgccgtgtctgccagaaacctggtgacctggtcatg
tgtaaccagtgcgagttttgcttccacctggattgccacctccctgctctgcaggatgtt
ccaggggaggaatggagttgctcactctgccacgtgctccctgacctaaaggaggaagat
ggaagccttagcctggatggagcagatagcactggtgtggtagctaaactctcaccagcc
aaccagcggaaatgtgagcgtgttctacttgccctgttctgccatgaaccgtgccgcccc
ttgcatcagctggctacggactctacattctccatggagcagcctggtggtaccttagat
ctgaccctgattcgtgctcgactccaagagaagctatcacctccttatagctccccccag
gagtttgcccaagatgtgggccgtatgttcaaacagttcaacaaactgactgaggacaag
gcggatgttcagtccatcatcggcctgcagcgcttctttgagacacgtatgaacgatgcc
tttggtgacaccaagttttctgctgttctggtagaaccaccaccattgaaccttcccagt
gctggcctaagtgctcaggagctgtctggccctggtgatggcccctga
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