KEGG   Apodemus sylvaticus (European woodmouse): 127675280
Entry
127675280         CDS       T10613                                 
Symbol
Col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04151  PI3K-Akt signaling pathway
asyl04382  Cornified envelope formation
asyl04510  Focal adhesion
asyl04512  ECM-receptor interaction
asyl04518  Integrin signaling
asyl04820  Cytoskeleton in muscle cells
asyl04926  Relaxin signaling pathway
asyl04933  AGE-RAGE signaling pathway in diabetic complications
asyl04974  Protein digestion and absorption
asyl05146  Amoebiasis
asyl05165  Human papillomavirus infection
asyl05200  Pathways in cancer
asyl05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    127675280 (Col4a5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127675280 (Col4a5)
   04518 Integrin signaling
    127675280 (Col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127675280 (Col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127675280 (Col4a5)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    127675280 (Col4a5)
  09154 Digestive system
   04974 Protein digestion and absorption
    127675280 (Col4a5)
  09158 Development and regeneration
   04382 Cornified envelope formation
    127675280 (Col4a5)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    127675280 (Col4a5)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    127675280 (Col4a5)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    127675280 (Col4a5)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    127675280 (Col4a5)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    127675280 (Col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asyl04147]
    127675280 (Col4a5)
   00536 Glycosaminoglycan binding proteins [BR:asyl00536]
    127675280 (Col4a5)
Exosome [BR:asyl04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   127675280 (Col4a5)
Glycosaminoglycan binding proteins [BR:asyl00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   127675280 (Col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 127675280
NCBI-ProteinID: XP_052027308
LinkDB
Position
X:103034371..103256579
AA seq 1691 aa
MQVLGVCPVACWFLLALCLWVQPAEAAVCHGCSSGLKCDCGGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNQGYPGPPG
IQGPPGPKGTQGPSGPPGPPGLMGPPGPPGPPGPKGNMGLNFQGTKGEKGEQGLQGPPGP
PGQISEQKRPIDIEFQKGDQGVPGDRGPPGPPGIPGPPGLPGGRKGEKGEPGEPGKRGKP
GKDGETGQPGIPGLPGDPGYPGEPGRDGEKGQKGEIGPPGPPGLVIPAPGTGVTMGEKGN
IGLPGLPGEKGERGLPGIQGPPGFPGPPGTAVIGPPGPPGYPGERGQKGDEGPPGICIPG
SPGLDGLPGAPGLPGPPGPPGPQLPSSDEICKAGPPGPPGSPGDKGLQGEQGVKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGIPGEKGDKGQAGTTGPKGLPGIPGPPGAPGF
PGSKGDPGDVLTLPGMKGDKGELGSPGAPGLPGLPGNPGKDGLPGLPGPKGEPGGITFKG
ERGPPGNPGLPGLPGNMGPPGPVGFGPPGPMGEKGVQGVAGNPGQPGLPGPKGDPGQTIT
HPGKPGLPGNPGRDGEVGLPGDPGPPGQPGLPGIPGSKGEPGIPGIGPPGPPGPKGFPGI
PGPPGAPGAPGRMGPEGPPGLPGFPGPKGEPGFGLPGPPGPPGFPGFKGTPGPKGDRGFP
GPPGPPGRTGLDGLPGPKGDVGPNGQPGPIGPPGLPGIGLQGPPGPPGTPGPIGPPGLHG
IPGEKGDPGPPGFDVPGLPGERGSPGLPGAPGLIGPPGSPGLPGKAGVPGFPGVKGEMGM
MGPPGPPGPLGIPGRSGAPGLKGDDGMQGQPGLPGPAGEKGGKGEPGLPGPPGPLHPDFL
GSKGEKGEPGLPGIPGLSGPKGYQGLPGDPGQPGLSGQPGSPGLPGPKGNPGLPGPPGLI
GPPGPKGNIGDMGFPGPQGVDGPPGPPGVPGQPGSPGLPGQKGSKGEPGVSGIGLPGLPG
PKGEPGLPGYPGNPGIKGSVGETGLPGLPGNPGAKGQPGLPGFPGTPGLPGPKGMNGPPG
NPGLPGEPGPVGAGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGPKGDGGTPGLPGNPGLPGPKGEPGFQGFPGMPGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGPPGFQGPPGTEGPRGPPGNGGIKGERGNPGPPGQPGLPGLKGDQGPPGLPGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPIGVPGSTGPDGEPGLTGPPGPPGLPGPSGQSIVIKGD
PGPPGIPGQPGLKGLPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGA
RGLDGPPGPDGLQGPPGPPGTTSVAHGFLITRHSQTTDAPQCPQGTVHIYDGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMNMEPLKG
QSIQPFISRCAVCEAPAVVIAVHSQTIQIPHCPHGWDSLWIGYSFMMHTSAGAEGSGQTL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDMSDMFSKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq 5076 nt   +upstreamnt  +downstreamnt
atgcaagtgcttggagtgtgcccggtcgcctgctggttcttactggccctgtgtctgtgg
gtgcagcccgcagaggctgcggtctgccatgggtgttcttctggattaaaatgtgactgt
ggtggtataaaaggagaaaagggagaacggggatttccaggtttagaaggccatccaggt
ttaccaggatttccaggtccagaaggccctccaggacctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctgggatgccaggccatgatggggctccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtccaggctttcct
ggtttacaaggtcctccaggacctcctggaatcccaggtatgaagggggaaccaggcagt
ataattatgtcatcactgccaggaccaaagggtaatcaaggatacccaggtcctcctgga
atacaaggtccacctggtcccaagggtacacaagggccaagtggtcctccaggcccacca
ggtttaatgggccctcctggcccaccaggcccaccgggaccaaaggggaatatgggctta
aatttccagggaaccaaaggtgaaaaaggtgaacaaggtcttcagggtccgcctggtcca
cctgggcagatcagtgaacagaaaagaccaattgacatagaatttcagaaaggagatcag
ggagttcctggtgatagagggcctcctgggcctccaggaatacctggtcctcctggtctt
cctggtggtaggaaaggtgaaaagggcgagccaggagagccaggcaaaagaggtaaacca
ggcaaagatggagagactggccaaccgggaatccctggcttgcctggtgatcctggttac
cctggtgaaccaggaagggatggtgaaaagggccaaaagggtgaaattggcccacctgga
cctcccggacttgtaattcctgcacctggaactggtgtgactatgggagaaaaaggaaat
atcgggctacctggtttgcctggagaaaagggagagcgaggacttcctggaatacaaggt
ccacctggctttcctggacctccagggacagcagtcataggtccccctggtcctcctgga
tatcctggtgaaaggggccagaaaggtgatgaaggtccccctggaatttgtattcctgga
tctcctggacttgatggactgcctggggctcctggccttccaggacctcctggtcctcct
gggccccagttgccatccagtgatgaaatctgtaaagcaggccctccagggcccccagga
tctccaggtgataaaggactccaaggagagcaaggagtaaaaggtgacaaaggtgatact
tgcttcaactgtattggaactggcatttcagggcctccaggccaacctggtttaccaggt
ctcccaggtcctccaggatctcttggaatcccaggagagaaaggcgacaaaggacaagct
gggacaactggtccgaaaggattgccaggcatacctggacctccaggtgctccaggcttt
ccaggatctaagggtgaccccggagatgtccttactcttccaggaatgaaaggtgacaaa
ggagagttgggttccccgggagctccagggcttcctggtctacctggtaatcctggaaag
gatggtttgccaggactccctggccccaaaggagagcctggaggaattacttttaagggt
gaaagaggtccccctgggaacccaggtttaccaggtctcccgggaaatatgggacctcct
ggccctgttggttttggacctccaggccccatgggtgaaaaaggcgtacaaggtgtggca
ggaaatccgggccagcctggattaccaggtcctaaaggtgatccaggccagaccataacc
catccaggaaagcctggcttgccaggtaatccaggcagagatggtgaagtgggtcttcca
ggtgatcctggacctccaggccaaccaggcctgccaggaatacctggtagcaaaggagaa
ccaggtatccctgggattgggcctcctggaccacctggtcccaaaggttttccaggaatt
ccgggacctccaggagcccctggggccccaggaagaatgggtccagaagggcctcctggg
ttaccaggctttccaggaccaaagggagagcctggatttgggttacctgggccacctggg
ccaccaggattcccaggtttcaaaggaacacctggtccaaaaggtgatcgtggtttccca
ggacctccaggtcctccaggacgcactggcttggatgggctacctggaccaaaaggtgac
gttggaccaaatggacagcctggcccaatagggcctccagggctgccaggaattggtctt
cagggaccaccaggaccaccaggaactccagggccaataggcccacctggcttacatgga
attccaggagagaagggagatccaggacctcctgggtttgatgttccaggactccctgga
gagagaggcagtccagggctccctggagccccaggtcttataggacctccaggatcacct
ggtctacctggaaaagcaggtgtccctggatttccaggtgtcaaaggtgaaatgggtatg
atgggacctccaggcccacctggacctttgggaattcctggcaggagtggtgctcctggt
cttaaaggtgatgatggcatgcaaggacagccaggtctccctggccctgcaggagaaaag
ggtggtaagggagagcctggccttccaggtccgcctggaccactgcatccagattttctg
ggatcaaaaggagaaaagggtgagcctggcttaccaggtattcctggactttcaggacca
aaaggctaccaaggattacctggagacccagggcaacctggactgagtggacaaccagga
tcaccaggactcccaggtcccaagggtaaccctggtctccctggtccaccaggacttata
ggacctcctggaccaaaaggaaacattggtgacatgggttttcctggccctcaaggtgta
gatgggccccctggacctcctggagttcctggacaacctggctctccaggattacctggc
cagaaaggaagtaaaggagaacctggagtttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaacctggcctgcctggatatccaggaaacccaggtatcaaaggatctgtg
ggagagactggtcttcctggattaccaggaaaccctggagcaaaaggtcaaccgggcctg
cctgggttcccaggaacaccagggcttcctggaccaaaaggtatgaatggtcctcctggt
aaccctggccttccaggagaacctggtcctgtaggtgctggagggcgtcctggaccacca
ggacctcctggtgaaaaaggtaagccaggtcaagatggcattcctggaccagccggacaa
aagggagagccaggtcaaccaggctttggaatcccaggacctcctggactcccaggactt
tctggtccaaagggtgatggaggaacacctggacttccaggaaatcctggccttccaggt
ccaaagggtgagccaggctttcagggattccctggtatgccaggtcctccaggtcctcct
ggttctcctggtcctgctttggaaggtcccaaaggaaaccctgggcctcaaggccctcct
gggagaccaggtcctccaggttttcaaggtccaccaggtacagaaggtcctcgtggtccc
cctggaaatggaggtattaaaggagagaggggaaatccaggcccacctgggcaaccaggc
ttgcctggtttgaaaggagatcaaggaccaccaggactcccgggtaaccctggccggcca
ggtcttaatggaatgaaaggagatcctggtctccctggcgttccaggattcccaggaatg
aaaggacccattggagtaccaggctcaactggccctgatggggaaccaggtcttactggg
cctccaggtcctcctgggttgcctggtccttcaggacagagtattgtaatcaaaggagat
cctggacctccagggattcctggacaacctggattaaaaggtctaccaggacttccaggc
cctcaaggcctaccaggtccaattggccctccaggagacccaggacgcaatggactccca
ggttttgacggtgcaggtgggcgcaaaggagacccaggtctgccaggacagccaggtgcc
cgtggattggatggtccgccaggaccagatggattgcaaggacctccaggtccccctgga
accacctctgttgcccatggattcctcatcacacgtcacagtcaaacaacagatgcccca
cagtgcccacagggaacagtccatatctatgatggcttttctctcctgtatgtacaagga
aataaaagagcccatggtcaagacttggggacggctggcagctgccttcgtcgcttcagt
accatgcctttcatgttctgcaacattaacaacgtctgtaactttgcttcaagaaatgac
tattcttactggctttccaccccagagcccatgccaatgaacatggaacccctgaagggc
caaagcatccagccattcattagtcgatgtgcagtatgtgaggctccagctgtggtgatc
gcagttcacagccagactattcagattccacactgccctcacgggtgggactctctatgg
attggctattccttcatgatgcatacgagtgcaggagcagaaggctctggccaaacctta
gcctctcctggatcctgtttggaagaatttcgttcagctcccttcatcgaatgtcatggg
cgagggacatgcaattactatgccaattcttacagcttttggctggccactgttgatatg
tcagacatgttcagtaaacctcagtcagagacactgaaagcaggagacttgaggactcga
attagccgatgtcaagtatgcatgaagaggacataa

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