Apodemus sylvaticus (European woodmouse): 127675280
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Entry
127675280 CDS
T10613
Symbol
Col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04151
PI3K-Akt signaling pathway
asyl04510
Focal adhesion
asyl04512
ECM-receptor interaction
asyl04820
Cytoskeleton in muscle cells
asyl04926
Relaxin signaling pathway
asyl04933
AGE-RAGE signaling pathway in diabetic complications
asyl04974
Protein digestion and absorption
asyl05146
Amoebiasis
asyl05165
Human papillomavirus infection
asyl05200
Pathways in cancer
asyl05222
Small cell lung cancer
Brite
Exosome [BR:
asyl04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
127675280 (Col4a5)
Glycosaminoglycan binding proteins [BR:
asyl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127675280 (Col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127675280
NCBI-ProteinID:
XP_052027308
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Position
X:103034371..103256579
Genome browser
AA seq
1691 aa
AA seq
DB search
MQVLGVCPVACWFLLALCLWVQPAEAAVCHGCSSGLKCDCGGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNQGYPGPPG
IQGPPGPKGTQGPSGPPGPPGLMGPPGPPGPPGPKGNMGLNFQGTKGEKGEQGLQGPPGP
PGQISEQKRPIDIEFQKGDQGVPGDRGPPGPPGIPGPPGLPGGRKGEKGEPGEPGKRGKP
GKDGETGQPGIPGLPGDPGYPGEPGRDGEKGQKGEIGPPGPPGLVIPAPGTGVTMGEKGN
IGLPGLPGEKGERGLPGIQGPPGFPGPPGTAVIGPPGPPGYPGERGQKGDEGPPGICIPG
SPGLDGLPGAPGLPGPPGPPGPQLPSSDEICKAGPPGPPGSPGDKGLQGEQGVKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGIPGEKGDKGQAGTTGPKGLPGIPGPPGAPGF
PGSKGDPGDVLTLPGMKGDKGELGSPGAPGLPGLPGNPGKDGLPGLPGPKGEPGGITFKG
ERGPPGNPGLPGLPGNMGPPGPVGFGPPGPMGEKGVQGVAGNPGQPGLPGPKGDPGQTIT
HPGKPGLPGNPGRDGEVGLPGDPGPPGQPGLPGIPGSKGEPGIPGIGPPGPPGPKGFPGI
PGPPGAPGAPGRMGPEGPPGLPGFPGPKGEPGFGLPGPPGPPGFPGFKGTPGPKGDRGFP
GPPGPPGRTGLDGLPGPKGDVGPNGQPGPIGPPGLPGIGLQGPPGPPGTPGPIGPPGLHG
IPGEKGDPGPPGFDVPGLPGERGSPGLPGAPGLIGPPGSPGLPGKAGVPGFPGVKGEMGM
MGPPGPPGPLGIPGRSGAPGLKGDDGMQGQPGLPGPAGEKGGKGEPGLPGPPGPLHPDFL
GSKGEKGEPGLPGIPGLSGPKGYQGLPGDPGQPGLSGQPGSPGLPGPKGNPGLPGPPGLI
GPPGPKGNIGDMGFPGPQGVDGPPGPPGVPGQPGSPGLPGQKGSKGEPGVSGIGLPGLPG
PKGEPGLPGYPGNPGIKGSVGETGLPGLPGNPGAKGQPGLPGFPGTPGLPGPKGMNGPPG
NPGLPGEPGPVGAGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGPKGDGGTPGLPGNPGLPGPKGEPGFQGFPGMPGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGPPGFQGPPGTEGPRGPPGNGGIKGERGNPGPPGQPGLPGLKGDQGPPGLPGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPIGVPGSTGPDGEPGLTGPPGPPGLPGPSGQSIVIKGD
PGPPGIPGQPGLKGLPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGA
RGLDGPPGPDGLQGPPGPPGTTSVAHGFLITRHSQTTDAPQCPQGTVHIYDGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMNMEPLKG
QSIQPFISRCAVCEAPAVVIAVHSQTIQIPHCPHGWDSLWIGYSFMMHTSAGAEGSGQTL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDMSDMFSKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgcttggagtgtgcccggtcgcctgctggttcttactggccctgtgtctgtgg
gtgcagcccgcagaggctgcggtctgccatgggtgttcttctggattaaaatgtgactgt
ggtggtataaaaggagaaaagggagaacggggatttccaggtttagaaggccatccaggt
ttaccaggatttccaggtccagaaggccctccaggacctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctgggatgccaggccatgatggggctccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtccaggctttcct
ggtttacaaggtcctccaggacctcctggaatcccaggtatgaagggggaaccaggcagt
ataattatgtcatcactgccaggaccaaagggtaatcaaggatacccaggtcctcctgga
atacaaggtccacctggtcccaagggtacacaagggccaagtggtcctccaggcccacca
ggtttaatgggccctcctggcccaccaggcccaccgggaccaaaggggaatatgggctta
aatttccagggaaccaaaggtgaaaaaggtgaacaaggtcttcagggtccgcctggtcca
cctgggcagatcagtgaacagaaaagaccaattgacatagaatttcagaaaggagatcag
ggagttcctggtgatagagggcctcctgggcctccaggaatacctggtcctcctggtctt
cctggtggtaggaaaggtgaaaagggcgagccaggagagccaggcaaaagaggtaaacca
ggcaaagatggagagactggccaaccgggaatccctggcttgcctggtgatcctggttac
cctggtgaaccaggaagggatggtgaaaagggccaaaagggtgaaattggcccacctgga
cctcccggacttgtaattcctgcacctggaactggtgtgactatgggagaaaaaggaaat
atcgggctacctggtttgcctggagaaaagggagagcgaggacttcctggaatacaaggt
ccacctggctttcctggacctccagggacagcagtcataggtccccctggtcctcctgga
tatcctggtgaaaggggccagaaaggtgatgaaggtccccctggaatttgtattcctgga
tctcctggacttgatggactgcctggggctcctggccttccaggacctcctggtcctcct
gggccccagttgccatccagtgatgaaatctgtaaagcaggccctccagggcccccagga
tctccaggtgataaaggactccaaggagagcaaggagtaaaaggtgacaaaggtgatact
tgcttcaactgtattggaactggcatttcagggcctccaggccaacctggtttaccaggt
ctcccaggtcctccaggatctcttggaatcccaggagagaaaggcgacaaaggacaagct
gggacaactggtccgaaaggattgccaggcatacctggacctccaggtgctccaggcttt
ccaggatctaagggtgaccccggagatgtccttactcttccaggaatgaaaggtgacaaa
ggagagttgggttccccgggagctccagggcttcctggtctacctggtaatcctggaaag
gatggtttgccaggactccctggccccaaaggagagcctggaggaattacttttaagggt
gaaagaggtccccctgggaacccaggtttaccaggtctcccgggaaatatgggacctcct
ggccctgttggttttggacctccaggccccatgggtgaaaaaggcgtacaaggtgtggca
ggaaatccgggccagcctggattaccaggtcctaaaggtgatccaggccagaccataacc
catccaggaaagcctggcttgccaggtaatccaggcagagatggtgaagtgggtcttcca
ggtgatcctggacctccaggccaaccaggcctgccaggaatacctggtagcaaaggagaa
ccaggtatccctgggattgggcctcctggaccacctggtcccaaaggttttccaggaatt
ccgggacctccaggagcccctggggccccaggaagaatgggtccagaagggcctcctggg
ttaccaggctttccaggaccaaagggagagcctggatttgggttacctgggccacctggg
ccaccaggattcccaggtttcaaaggaacacctggtccaaaaggtgatcgtggtttccca
ggacctccaggtcctccaggacgcactggcttggatgggctacctggaccaaaaggtgac
gttggaccaaatggacagcctggcccaatagggcctccagggctgccaggaattggtctt
cagggaccaccaggaccaccaggaactccagggccaataggcccacctggcttacatgga
attccaggagagaagggagatccaggacctcctgggtttgatgttccaggactccctgga
gagagaggcagtccagggctccctggagccccaggtcttataggacctccaggatcacct
ggtctacctggaaaagcaggtgtccctggatttccaggtgtcaaaggtgaaatgggtatg
atgggacctccaggcccacctggacctttgggaattcctggcaggagtggtgctcctggt
cttaaaggtgatgatggcatgcaaggacagccaggtctccctggccctgcaggagaaaag
ggtggtaagggagagcctggccttccaggtccgcctggaccactgcatccagattttctg
ggatcaaaaggagaaaagggtgagcctggcttaccaggtattcctggactttcaggacca
aaaggctaccaaggattacctggagacccagggcaacctggactgagtggacaaccagga
tcaccaggactcccaggtcccaagggtaaccctggtctccctggtccaccaggacttata
ggacctcctggaccaaaaggaaacattggtgacatgggttttcctggccctcaaggtgta
gatgggccccctggacctcctggagttcctggacaacctggctctccaggattacctggc
cagaaaggaagtaaaggagaacctggagtttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaacctggcctgcctggatatccaggaaacccaggtatcaaaggatctgtg
ggagagactggtcttcctggattaccaggaaaccctggagcaaaaggtcaaccgggcctg
cctgggttcccaggaacaccagggcttcctggaccaaaaggtatgaatggtcctcctggt
aaccctggccttccaggagaacctggtcctgtaggtgctggagggcgtcctggaccacca
ggacctcctggtgaaaaaggtaagccaggtcaagatggcattcctggaccagccggacaa
aagggagagccaggtcaaccaggctttggaatcccaggacctcctggactcccaggactt
tctggtccaaagggtgatggaggaacacctggacttccaggaaatcctggccttccaggt
ccaaagggtgagccaggctttcagggattccctggtatgccaggtcctccaggtcctcct
ggttctcctggtcctgctttggaaggtcccaaaggaaaccctgggcctcaaggccctcct
gggagaccaggtcctccaggttttcaaggtccaccaggtacagaaggtcctcgtggtccc
cctggaaatggaggtattaaaggagagaggggaaatccaggcccacctgggcaaccaggc
ttgcctggtttgaaaggagatcaaggaccaccaggactcccgggtaaccctggccggcca
ggtcttaatggaatgaaaggagatcctggtctccctggcgttccaggattcccaggaatg
aaaggacccattggagtaccaggctcaactggccctgatggggaaccaggtcttactggg
cctccaggtcctcctgggttgcctggtccttcaggacagagtattgtaatcaaaggagat
cctggacctccagggattcctggacaacctggattaaaaggtctaccaggacttccaggc
cctcaaggcctaccaggtccaattggccctccaggagacccaggacgcaatggactccca
ggttttgacggtgcaggtgggcgcaaaggagacccaggtctgccaggacagccaggtgcc
cgtggattggatggtccgccaggaccagatggattgcaaggacctccaggtccccctgga
accacctctgttgcccatggattcctcatcacacgtcacagtcaaacaacagatgcccca
cagtgcccacagggaacagtccatatctatgatggcttttctctcctgtatgtacaagga
aataaaagagcccatggtcaagacttggggacggctggcagctgccttcgtcgcttcagt
accatgcctttcatgttctgcaacattaacaacgtctgtaactttgcttcaagaaatgac
tattcttactggctttccaccccagagcccatgccaatgaacatggaacccctgaagggc
caaagcatccagccattcattagtcgatgtgcagtatgtgaggctccagctgtggtgatc
gcagttcacagccagactattcagattccacactgccctcacgggtgggactctctatgg
attggctattccttcatgatgcatacgagtgcaggagcagaaggctctggccaaacctta
gcctctcctggatcctgtttggaagaatttcgttcagctcccttcatcgaatgtcatggg
cgagggacatgcaattactatgccaattcttacagcttttggctggccactgttgatatg
tcagacatgttcagtaaacctcagtcagagacactgaaagcaggagacttgaggactcga
attagccgatgtcaagtatgcatgaagaggacataa
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