Apodemus sylvaticus (European woodmouse): 127675332
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Entry
127675332 CDS
T10613
Symbol
Mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127675332 (Mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127675332 (Mid1)
Enzymes [BR:
asyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127675332 (Mid1)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127675332 (Mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-RING_2
zf-C3HC4_2
zf-RING_5
U-box
Motif
Other DBs
NCBI-GeneID:
127675332
NCBI-ProteinID:
XP_052027391
LinkDB
All DBs
Position
X:complement(22110364..22297598)
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AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDTNTMSSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDVALAQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgtcctatttgtctggagctttttgaggatcct
ctcctgcttccctgcgcacatagcctctgcttcaactgtgcccatcgcatcctggtctct
cactgtgccaccaacgagcctgtggagtccatcaacgccttccagtgccccacctgccgg
catgtcatcacgctcagccagcgaggtctagacgggctcaagcgcaacgtcaccctacaa
aacatcattgacaggtttcagaaagcatctgtgagcgggcccaattctcccagtgagacc
cgcagggagcgggcctttgacaccaacaccatgtcctctgccgagaaggttctttgccag
ttctgtgaccaggatcctgcccaggatgctgtgaagacctgtgttacttgtgaagtgtcc
tactgtgatgagtgcctgaaagccactcatccgaataagaagccctttacaggccatcgt
ctgattgagccaatcccggactcgcacatccgggggctgatgtgcctggagcacgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgcgatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacctggagagtaatctcaccaatcttattaagagaaacacagaactggagactctt
ttggctaaactcatccaaacttgtcaacatgttgaagtcaatgcatcccgtcaagaagcc
aaactgacagaagaatgtgatcttcttattgaaattattcagcaaagaagacaaattatt
ggaacaaagattaaagaaggcaaggtgatgaggctccgcaaactagctcagcagattgca
aactgtaaacaatgtattgaaaggtctgcatcactcatctcccaagcagaacactcgctg
aaggagaatgaccatgcccgttttctacagacagcaaagaatatcactgagagggtctcc
atggcaactgcatcctcccaggtcctaattcctgaaatcaacctcaatgacacatttgac
acttttgccttagatttttcccgggagaagaaactgctagaatgtctggattacctaaca
gctcccaaccctcctacaattagagaagagctctgcacagcttcctatgacaccatcact
gttcactggacttcagatgatgagttcagtgtggtctcctatgaactccagtacactata
ttcactggacaagccaatgttgttagtctatgtaactctgcagatagctggatgattgtg
cccaacatcaagcagaaccactacactgtgcatggcctacaaagtggcaccaagtatatc
ttcatggtcaaggccatcaaccaggcaggcagccgcagcagtgagcctgggaagttgaag
acaaacagtcagccatttaaactggatcccaaatctgctcatcgaaaactgaaggtgtcc
catgacaacctgacggttgaacgtgatgagtcatcatccaaaaagagtcacacacctgaa
cgcttcactagccaaggcagctatggagtggctggaaatgtgttcattgacagtggccgt
cattactgggaagtggtcataagtggaagcacatggtacgccattggccttgcatataaa
tcggctccaaaacatgaatggattgggaagaattctgcttcctgggccctctgccgctgc
aacaataactgggtggtgagacataacagcaaggaaatccccattgagccagccccccac
ctccggcgcgtaggcatcctgctggactatgataatggctcaatcgctttttatgatgct
ttgaactccatccacctctacacctttgatgtggcgcttgcgcagcctgtgtgccccacc
tttactgtgtggaacaagtgtttgacaattataactggtcttcccatcccagaccatttg
gactgtacagaacagctaccctga
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