Apodemus sylvaticus (European woodmouse): 127675485
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Entry
127675485 CDS
T10613
Symbol
Usp9x
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asyl01002
]
127675485 (Usp9x)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127675485 (Usp9x)
Enzymes [BR:
asyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127675485 (Usp9x)
Peptidases and inhibitors [BR:
asyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127675485 (Usp9x)
Ubiquitin system [BR:
asyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127675485 (Usp9x)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Motif
Other DBs
NCBI-GeneID:
127675485
NCBI-ProteinID:
XP_052027548
LinkDB
All DBs
Position
X:complement(7631442..7741668)
Genome browser
AA seq
2420 aa
AA seq
DB search
MTATTRGSPVGGNDNQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQI
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLAQDWFPLLELLAMALNP
HCKFHIYNGTRPCESVSSSVQLPEDELFARSPDPRSPKGWLVDLLNKFGTLNGYQILHDR
FINGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVAGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGSTEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQSQRSPHVFYRH
DLINQLQHNHALVTLVAENLASYMESMRLYGRDNEDYDPQTVRLGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ESNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
SNDDIACRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAVRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSFIVRFPNQGRQVD
DLEVWSHTNDTIGSVRRCILNRIKANVAHTKIELFVGGELIDPGDDRKLIGQLNLKDKSL
ITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDSTTIEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPAGAPLADDSSDFQFHFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPGVEGVNPLTSVNQVTHDQAVVLQS
ALQSIPNPSSECMLRNVSVRLAQQISDEASRYMPDICVIRAIQKIIWTSGCGGLQLVFSP
NEEVTKVYEKTNAGNEPDLEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCGSPATINAGFELLVALAVGCVR
NLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQ
LYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGYPQQFEDKPPLSKTE
DRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLV
DSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSL
EQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFND
YFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQNEQSESEKAGSTKYRLVGVLVHSGQ
ASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMM
KRMSYRRQKRWWNAYILFYERMDTMGHDDEVIRYISEIAITTRPHQIVMPSAIERSVRKQ
NVQFMHNRMQYSLEYFQFMKKLLTCNSVYLNPPPGQDHLSPEAEEITMISIQLAARFLFT
TGFHTKKIVRGSASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFSEYLLECPSAEVRG
AFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVLNLLRREVSEHGRH
LQQYFNLFVMYANLGVAEKTQLLKLSVPATFMLVSLDEGPGPPIKYQYAELGKLYSVVSQ
LIRCCNVSSRMQSSINGNPSLPNPFGDPNLSQPIMPIQQNVVDILFVRTSYVKKIIEDCS
NSDETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHR
IHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSSCPVAYQILQGNGDLKRK
WTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELC
PEEEPDDQDAPDEHESPPPEDAPLYPHSPGSQYQQNNHVHGQPYTGPAAHHMNNPQRTGQ
RAQENYEGGEEVSPPQTKDQ
NT seq
7263 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccagttggagggaatgacaaccagggccaagcccct
gatggacagtctcagccccccctccaacagaatcagacttcatcacctgattcgtccaat
gaaaattcccctgcaactcctcctgatgagcaaggtcaaggtgatgctcctccacagatt
gaagatgaggaacctgcttttccacatactgacttggcaaagttagatgatatgatcaac
aggcctcgatgggtcgttccagttttgccgaaaggggaattagaagtgcttttagaagct
gctattgatcttagtaagaaaggccttgatgttaaaagtgaagcatgtcagcgatttttc
cgagatggattaacaatatcattcacaaaaatccttacagatgaagcagtgagtggctgg
aagtttgaaatacatagatgtattattaacaatactcatcgcctggtggagctatgtgtg
gctaagttagcccaagactggtttccacttctagaacttcttgccatggccttaaatcct
cattgcaaattccatatctacaatggtactcgtccctgcgagtcagtgtcctcaagtgtt
cagttgcctgaagatgaactctttgctcgttctccagaccctcgatcaccaaaaggttgg
ctagtagatcttctcaacaaatttggcactttaaatggataccagatactgcacgatcgt
tttattaatgggtcagcattaaatgttcagataattgcagctcttattaaaccattcgga
cagtgctatgagtttcttactcttcacacggtgaaaaaatactttcttccaataatagaa
atggttccacagtttttagaaaacttaactgatgaagagctgaagaaagaagcaaagaat
gaagccaaaaatgatgctctttcaatgattattaaatcattgaagaatttagcttcacgg
gttgctggacaagaagaaactgtaaagaacttagaaatatttaggttaaaaatgatactt
agattgttgcaaatttcttctttcaatggaaagatgaatgcactgaatgaggttaataaa
gtgatttccagtgtgtcatactatacccatcgacatggcagtactgaggaagaagagtgg
ctcacagcagagaggatggctgaatggatacagcagaacaatattttatccatagtttta
cgagatagtcttcatcaaccacagtatgtagagaaactagaaaagattcttcgctttgtc
ataaaagaaaaagctctgaccttgcaagatcttgataatatctgggcagcacaggcaggg
aaacatgaagccattgtaaagaatgtacatgatctactggccaaattggcatgggatttt
tctcctgaacaacttgatcatctttttgattgctttaaggccagttggacaaatgcaagt
aaaaagcaacgtgaaaagctccttgagctgattcgtcgtcttgcagaagatgataaagat
ggtgtgatggcacataaagtgttgaaccttctgtggaatctagctcacagtgatgatgtg
cctgtagatatcatggacttggctctcagtgctcacatcaaaatactagattatagttgc
tcccaggaccgggatacccaaaagatccagtggatagatcgcttcatagaagaacttcgc
acaaatgacaaatgggtcattcctgcactgaaacaaattagagaaatttgtagtttgttt
ggtgaagcacctcaaaacttgagtcaaagtcagcgaagtccccatgtattttatcgccat
gacttaatcaatcaacttcagcacaatcatgccctagttactttggtagcagaaaacctt
gcatcttacatggaaagcatgagactgtatggcagagacaatgaagactatgacccacaa
actgtgagactgggaagtagatatagtcatgttcaagaagtccaagaacggcttaacttt
cttagatttttattgaaggatggccagctgtggttgtgtgctcctcaggcaaaacaaata
tggaagtgcttagcagaaaatgcagtttatctttgtgatcgtgaagcctgttttaagtgg
tattccaaattaatgggagacgaaccagacttagatcctgatatcaataaggacttcttt
gaaagtaatgtgcttcagcttgatccttccctattaactgaaaatgggatgaaatgtttt
gagagattcttcaaagctgtgaattgtcgagaaggaaaacttgtagcaaaaagaagagcc
tatatgatggatgatttggaattgataggattagactatctttggagggttgtaattcag
agtaatgatgatattgcctgccgagctattgatcttcttaaagagatatacacaaacctt
ggtccaaggctgcaggtcaatcaggtggtgatccatgaagacttcattcagtcttgcttt
gatcgtttgaaagcctcttatgacacgctgtgtgttttggatggtgacaaagacagtatt
aattgtgcaagacaggaagctgttcgaatggtccgagtattaactgttctaagagaatat
ataaatgaatgtgacagtgattatcatgaagaaagaacaatattgcctatgtcaagagct
ttccgtggtaaacacctctcttttatagttcgatttccaaaccagggcagacaagtagat
gacttggaggtgtggtctcatacaaatgataccattggttcagttcgaagatgtatactc
aatcgcattaaagccaatgtagctcatacaaaaattgaactctttgtgggtggcgagctt
attgatcctggagatgacagaaagttgattggacaattaaacctaaaagataaatcacta
attacagccaaacttacccagataagctccaatatgccttcaagtcctgatagctcctcc
gattcctcaactggatctcctggaaaccatggtaatcattacagtgacggccccaatcca
gaagtggaaagctgtttgcctggagtgataatgtcacttcatcccagatacatctctttc
ctttggcaagttgcagacttagggagcagcctaaatatgccacctcttagagatggagca
agagtgcttatgaaacttatgccgccagatagtacaacaatagaaaaattaagagctatt
tgtttggaccatgccaaacttggagaaagcagccttagtccatctcttgactcacttttc
tttggtccttcagcctcacaagtgctatacctaacagaggtagtctatgccttgttaatg
cctgctggtgcacccctggctgatgattcctctgattttcagtttcacttcttgaaaagt
ggtggtctgccccttgtcctgagtatgctaaccagaaataacttcctaccaaatgcagat
atggaaactcgaaggggtgcctacctcaatgctcttaaaatagccaaactgttactaact
gccattggctatggccatgttcgtgctgtggcagaagcttgtcagccaggtgtggaaggc
gtgaatcctctgacatcggtcaaccaagtaactcatgatcaagcagtggtgctacaaagt
gcccttcagagcattcctaacccatcatctgaatgcatgcttagaaatgtgtctgttcgt
cttgctcagcagatttctgatgaggcttcaagatacatgcctgatatttgtgtaattaga
gctatacaaaaaattatttggacatcaggatgtgggggattacagttggtattcagtcca
aacgaagaagtcacaaaagtttatgagaagaccaatgcaggcaatgagccagaccttgaa
gatgaacaggtttgctgtgaagcattggaggtgatgacactgtgttttgccttgattcca
acagccttagatgctctaagtaaagaaaaagcttggcagacatttattattgacttactg
ttacactgtcacagcaaggaattaatcgacgatttcatctttcctgcatccaatgtttac
ctgcagtatatgagaaatggagagctccctgctgaacaggccattcctgtctgtggttca
ccagccacaattaatgctggttttgagttacttgtggcattagctgttggctgtgtgagg
aacctcaaacagatagtagattctttaactgaaatgtactacattggtacagcaataact
acttgtgaagcacttactgagtgggaatacctgccacctgttggaccccgcccaccaaaa
ggatttgtggggctgaaaaatgctggtgctacttgttacatgaattctgtgattcagcaa
ctctatatgatcccctctatcaggaacggtattcttgcaattgaaggcacaggtagtgat
gtagatgatgatatgtctggggatgagaagcaggacaatgagagcaatgttgatcccagg
gatgatgtgtttggataccctcaacaatttgaagacaaaccaccactgagtaagacagaa
gataggaaagagtacaatattggtgttctaagacatcttcaggttatctttggccattta
gctgcttctcgactgcagtactatgtgcccagaggattttggaaacagttcaggctttgg
ggtgagcctgtcaatcttcgtgaacaacatgatgctttagagttctttaattcgttggtg
gatagtttagatgaagctttaaaagccttagggcatccagctatgctaagtaaagtcttg
ggaggttcctttgctgatcagaaaatttgccaaggctgcccacataggtacgaatgtgaa
gaatcttttacgactctgaatgtagacattagaaaccaccaaaatcttcttgattctttg
gaacagtatgtcaaaggagacttgctagaaggggcaaatgcttatcattgtgaaaagtgc
aacaaaaaggttgatactgtaaagcgcttgctaattaaaaaattgcctcctgttcttgct
atccaactaaaacgattcgattatgactgggaaagagaatgtgcaatcaagttcaatgac
tactttgaatttcctcgagagttagacatggaaccttacacagttgcaggtgttgctaaa
ctggagggggataatgtcaacccagaaagtcagctgatacaacagaatgagcagtctgaa
agtgagaaagcaggaagcacaaaatacagacttgtgggtgtgcttgtacatagtggtcaa
gcaagtgggggacattactattcttacatcattcagaggaatggaggggatggtgaaaaa
aatcgttggtataaatttgatgatggagatgtaacagagtgtaaaatggatgacgatgaa
gaaatgaaaaaccagtgttttggtggcgagtacatgggagaagtgtttgatcacatgatg
aagcgcatgtcgtacaggcgccagaaaagatggtggaatgcatatatacttttttatgaa
cgaatggacacaatgggtcatgatgatgaggtgataagatacatatcagagattgctatc
accacaaggccccatcagattgttatgccatcggccattgaaagaagtgtacggaagcag
aatgttcagttcatgcacaaccggatgcagtacagtttggaatattttcagtttatgaaa
aaactacttacatgtaatagtgtttacttaaaccctcctccaggccaagatcacctgtct
cctgaagcagaagaaatcactatgattagtattcagcttgctgctaggttcctttttact
acaggatttcacacaaagaaaatagtccgaggatctgccagtgattggtatgatgcattg
tgtattctcctgcgtcacagcaagaatgtgcggttttggtttgctcacaatgttcttttt
aatgtttcaaatcgattttctgaataccttttggaatgtcctagtgcagaagtgagaggt
gcatttgcaaaactcatagttttcattgcacatttttctttacaagacggaccttgtcct
tcaccttttgcatctcctggaccttctagtcaggcttatgacaacttaagtttgagtgac
cacttactaagagcagtactcaatctcttgaggagggaggtttcagagcatggacgtcat
ttacagcagtatttcaacttgtttgtaatgtatgccaatttaggagtggcagagaaaaca
cagctgctcaaactgagtgtacctgctacctttatgcttgtgtccttagatgaaggtcct
ggtcctccaattaaatatcagtatgctgaattaggcaaattatattcagtagtgtcacaa
ctcatccgctgttgcaatgtctcttcaagaatgcagtcttcgatcaatggtaatccttct
cttccaaatccttttggtgatcctaacttatcacaacctataatgccaattcaacaaaat
gtggtagacattttatttgtgagaacaagttatgtgaagaaaattattgaagactgcagt
aactctgacgagaccgtcaaattgcttcgcttttgctgctgggagaatcctcagttctca
tctactgtcctcagtgaacttctttggcaggttgcatattcctatacttacgaactccgg
ccctatttggatctgcttttacaaatcttactgatcgaagactcctggcagactcacaga
attcataatgcccttaaaggaattccagatgaccgagatgggctgtttgacacaattcag
cgttctaagaatcactatcaaaaaagagcataccagtgtataaaatgtatggtagccctc
tttagcagttgtcctgttgcttaccaaatcctgcagggcaatggagatcttaaaaggaaa
tggacctgggcagtggagtggcttggagatgaactcgaaagaagaccatacactggcaat
cctcagtatacttataacaattggtctcctccggtacaaagcaatgaaacatcaaatggc
tatttcttggagagatcacacagtgctaggatgacacttgcaaaagcttgtgaactctgt
cctgaggaggaaccagatgaccaagatgccccagatgagcatgaatcacctccaccagaa
gatgctccattgtaccctcattcccctggatctcaatatcagcagaataaccatgtgcat
ggacagccatatacaggcccagcagcacatcacatgaacaaccctcagagaactggccaa
cgagcacaagaaaattatgaaggaggtgaagaagtgtccccacctcagaccaaggatcag
tga
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integrated database retrieval system
