Apodemus sylvaticus (European woodmouse): 127675548
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Entry
127675548 CDS
T10613
Symbol
Ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03022
Basal transcription factors
asyl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127675548 (Ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
127675548 (Ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asyl03021
]
127675548 (Ercc2)
03036 Chromosome and associated proteins [BR:
asyl03036
]
127675548 (Ercc2)
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127675548 (Ercc2)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
127675548 (Ercc2)
Transcription machinery [BR:
asyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127675548 (Ercc2)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127675548 (Ercc2)
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127675548 (Ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
TcaA_5th
Motif
Other DBs
NCBI-GeneID:
127675548
NCBI-ProteinID:
XP_052027584
LinkDB
All DBs
Position
1:complement(201920350..201930784)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDIHGRQVPLPAGIYNLDDL
KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDAQRLRDEYRRLVEGLREASVARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTITNPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAVLLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLQSEETLQRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctacttcccgtacgactacatctacccggag
cagttctcctacatgctggagctcaagcgcacgctggacgccaagggtcatggagtcctg
gagatgccttcaggcactgggaagacagtgtctctactggccctgattgtcgcctatcag
cgggcttatccactggaggtgaccaaacttatctactgctctcggaccgtaccagagatt
gagaaggtcatagaagagctccgtaagctgctcagcttctacgagcagcaggagggggag
aagctgccgttcctaggcctggccctgagctcgaggaagaacctgtgcatccatcccgag
gtgaccccactacgcttcgggaaggatgtcgatgggaagtgtcacagcctgacggcgtcg
tatgtgcgggcacagtaccagcaggatgccagcctgcctcactgccgcttctatgaggaa
tttgacattcatggacgccaggttcccctccctgcgggcatctacaacctggatgacctg
aaggccctcgggcagcgccagggctggtgcccctacttcctggctcgatactcgatcctg
catgccaatgtggtggtctacagctaccactacctcctggaccccaagatcgcagacctg
gtgtccaaagagctggcccgaaaggctgttgtggtcttcgatgaagcccacaacatcgac
aatgtctgcatcgactccatgagtgtcaacctcacccgcaggactctggaccgttgccag
agcaacttagacactctgcagaagaccgtgctcaggatcaaggagaccgacgcgcagcgg
ctgcgggatgagtaccggcgcctggtggagggcctgcgggaggccagtgtagcgcgggag
acagacgcccacctggccaaccctgtgctgcctgatgaggtgctgcaggaggcggtgccg
ggctccatccgcacagccgagcatttcctgggcttcctgcggcggctgctggagtacgtc
aagtggcggctgcgcgtgcagcacgtagtgcaggagagcccgcctgcctttctgagcggc
ctggcccagcgggtgtgcatccagcgcaagcccctcaggttctgtgctgagcgcctgcgc
tccctgctgcacacgctggagatcgccgacctggccgacttctccccgctcacactcctg
gccaacttcgccactctggtcagcacgtacgccaagggcttcaccattatcattgagccc
tttgacgacaggacccccactatcaccaaccctgttttgcacttcagctgtatggatgcc
tctttggccatcaagcctgtgtttgaacgcttccagtcagtcatcatcacttctgggaca
ctgtccccactggacatctaccccaagatcctggacttccaccccgtcacaatggcaacc
ttcaccatgacgctggcccgagtctgcctctgccccatgatcattggccgtggtaatgat
caggtagcaatcagctccaaatttgagaccagagaagatattgctgtaatccgcaactac
ggcaacctcctgctggagatgtctgctgtggtccctgacggcatcgtggccttcttcacc
agctaccagtacatggaaagcaccgtggcctcctggtacgagcagggcatcctggagaac
atccagaggaacaaactgctcttcattgagacccaggacggggctgagaccagtgtggcc
ctggagaaataccaggaggcctgtgagaatggccgtggggccgtcctgctgtcggtggct
cggggcaaagtgtcagaaggaattgactttgtgcaccactacgggcgggctgtgatcatg
ttcggagttccctatgtctacacccagagccgaattctcaaggcccggctggagtacctg
cgggaccagttccagatccgagagaacgacttcctcacctttgacgccatgcgccacgca
gcccagtgcgtgggccgcgccatcaggggcaaaacagactacggactcatggtctttgct
gacaagcggtttgcgcgtgcggacaagcgaggcaagctgcctcggtggatccaggagcac
ctgaccgactccaacctcaacctgacggtggacgagggggtccaggtcgccaagtacttc
ctgcggcaaatggcgcagcccttccaccgggaggatcagctgggcctgtccctgctcagc
ctggagcagctgcagtcagaggagacgctgcagcggattgagcagatcgctcagcagctc
tga
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