Apodemus sylvaticus (European woodmouse): 127675563
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Entry
127675563 CDS
T10613
Symbol
Col4a6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04151
PI3K-Akt signaling pathway
asyl04510
Focal adhesion
asyl04512
ECM-receptor interaction
asyl04820
Cytoskeleton in muscle cells
asyl04926
Relaxin signaling pathway
asyl04933
AGE-RAGE signaling pathway in diabetic complications
asyl04974
Protein digestion and absorption
asyl05146
Amoebiasis
asyl05165
Human papillomavirus infection
asyl05200
Pathways in cancer
asyl05222
Small cell lung cancer
Brite
Exosome [BR:
asyl04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
127675563 (Col4a6)
Glycosaminoglycan binding proteins [BR:
asyl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127675563 (Col4a6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127675563
NCBI-ProteinID:
XP_052027588
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Position
X:complement(102697998..103032864)
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AA seq
1691 aa
AA seq
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MHPGLWLFLVSLCLTKELAEAGQKMSYGKPCEGQDCSGGCTCSPEKGARGHPGPIGTQGP
AGPEGFAGPTGLSGLKGERGSPGPLGPYGSKGDKGPIGVPGFVGINGIPGHPGLPGPRGP
PGLDGCNGTRGAVGFPGPDGYPGILGPPGLPGHKGAKGEPVPFQGSITGMRGDPGLPGLD
GIPGPSGSPGSPGDAGPIGPPGLQGPPGPPGLPGPEGNMGLGFQGEKGAKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPPGFPGMSGPPGVPEFGSIGEKGEKGIVGLPGPRG
PMGSEGIQGHQGRQGKKGTSGFPGINGFPGIKGEKGDIGVRGPDSFTDAVGTVISGYPGD
PGVPGLPGLRGDEGIQGQGGPPGPPGLPSLTGLPGALGPRGSPGLKGDQGNSGRATFGEA
GLPGRVGLPGLPGLPGPSGPPGRTFETGPLPSLEPGLPGLQGEQGPKGHQGLKGIKGDSG
FCACEGGASNIGPRGEPGLPGIQGPIGLRGFKGIRGDPGSRGASGPTGAPGLFGTRGQTG
LKGKKGEPTVSRGSKMAGDKGDPGPQGTPGLAGAPGKDGIPGLPGLPGIQGDGGYGFPGE
RGLPGLPGEKGQDGQTGPPGIGLPGLPGPRGLPGDKGVDGLPGQQGLPGAQGVTLPCIIP
DSFGPSGFPGAPGFPGSKGTRGLPGIPGKPGTHGSKGEPGSPGLIHLPGLPGFPGARGDK
GLPGFPGLPGKDGYPGKAGSQGLPGSKGAAGDIFGAENGASGEQGLQGLPGDKGFPGDSG
LPGPQGLNGKSGMLGPKGERGNPGTSGPPGQPGPSGSTDLIGIKGTYGIPGAPGLPGISG
HPGKKGQRGDIGHPGSNGKRGLAGIKGLPGPQGSTGFLGSPGLSGVTGLPGIPGQKGEKG
SSGPAGFPGLPGLPGLPGADGLKGFSGSFGKVGQPGQAGIPGEKGDRGDPGPVGISSPRP
PMLNLWFKGEKGSQGSAGSDGFPGPRGDKGEPGIPGLPGPPGSPGQSNTIKGLNGNPGSP
GSMGRRGLPGLKGSLGIAGFPGMPGKSGSQGLIGTSGLLGATGVPGLKGDQGQTLGISGS
PGPKGQPGELGFKGVKGKDGLAGDRGYPGNKGDVGKVGIAGDPGFPGSPGLQGISGMIGD
PGLPGSSGLLGSIGHPGPSGLIGPKGFPGHPGLHGLNGLPGTKGTHGTPGASITGVPGPA
GLPGPKGERGVPGTVIGDPGNQGSRGQKGDQGSPGLQGPAGTPGAPGISLPSVIAGQPGD
PGRSGLDGERGRPGLPGPPGPPGPSSDQGDPGDSGFPGIPGLQGFKGNQGLPGFSGLSGD
LGLKGMRGEPGLMGTPGKIGPPGDPGFPGMKGKAGPRGFAGPRGAPGHTPIAEAMQVPPG
PLGLPGIDGIPGLIGDPGSQGFVGLQGSKGLPGIPGKDGPSGHPGPSGILGDPGLPGLQG
PPGFEGAPGNQGPIGQPGRPGHSVRVGYTLVKHSQSEQVPLCPIGTSRLWVGYSLLFVEG
QEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQ
IPQYISRCSVCEAPSQAIAVHSQDITVPQCPLGWHSLWIGYSFLMHTAAGAEGGGQSLVS
PGSCLEDFRATPFIECSGVRGTCHYFANKYSFWLTTVEERGQFREEPVSETLKTGQLHTR
VSRCQVCMKNL
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctggattgtggctgttcctggtttccttatgcttgaccaaagaactggcagaa
gcggggcagaagatgtcctatggaaagccatgtgagggccaagattgcagtggaggctgt
acatgctctcctgagaaaggagcaagaggtcaccctggaccaattgggactcaaggtcca
gctggtccagaaggttttgctggtccaactggtttatcagggttgaaaggagaaagaggc
tccccgggacccctgggaccatatggatcaaaaggagataagggccccattggagttcct
ggctttgttggcatcaatgggattccgggccaccctggactaccaggtccaagaggtcca
cctggcctagatggctgtaatggaactcgaggagctgttggatttccaggccctgatggc
taccctgggattttaggaccaccagggctgcctggtcacaaaggtgcaaaaggagaacct
gttccttttcaaggcagcatcacaggaatgaggggagatcctgggctgcctggactggat
ggaatccctggtccatcaggatcccccggatctcctggagatgcaggacccataggacca
ccgggcttacaaggtcccccaggcccccctggacttcccggtcctgagggaaatatgggg
ttaggtttccaaggagaaaaaggagccaagggggatgttggcctccctggccctgcagga
ccacctccatctactggggaactagaattcatgggatttcccaaagggaagaaaggttcc
aagggtgaaccagggcctccaggtttcccaggaatgagtggccctccaggtgtcccggaa
tttggatctattggagaaaaaggagaaaaggggatcgttggtttgccaggacctaggggt
cccatgggttcagaaggaatacaaggccatcaagggagacagggaaagaaggggacttca
ggttttcctgggattaacgggttcccaggaattaagggtgaaaagggagacattggtgtg
cgaggcccagacagtttcactgatgcagttggcactgtgatctcaggttatcctggagac
cctggtgtgccaggccttccaggccttagaggagatgaaggcatccaaggccaaggtggt
cctcctggcccccctggcctcccctcgttaacaggtcttccaggtgccctagggcctcgg
ggatctccaggcctgaaaggggaccaaggaaactcaggacgcgccacctttggagaagct
ggcctacctggcagagttggtttgccaggtttaccaggccttccaggcccatcaggccca
cctggtcgcacatttgagactggacccctgcctagcttagagcctgggctccctggtctc
caaggagaacaaggtccaaaaggacatcaaggtctcaaaggaataaaaggagactctggt
ttttgtgcttgtgaaggtggtgcctccaacattggaccacgtggggaaccaggcctgcct
gggatacaagggcccattggtctacggggttttaaagggattagaggagatccaggctca
aggggtgcatctggtcctactggggcaccagggctatttggaactagaggtcagaccggc
ctcaaaggaaagaaaggagaaccaactgtcagtagaggatcaaaaatggcaggggacaaa
ggtgaccctggtcctcaggggaccccaggtttggcgggagctccaggcaaggatggaata
ccaggtttaccaggcctcccaggcattcagggagatggtgggtatggcttcccaggtgaa
agagggttaccaggacttcctggtgaaaagggccaagatggtcaaactggaccaccagga
attgggctgccaggacttcctgggccccgtggacttccgggagataaaggagtggatggg
ttaccagggcaacaaggcctccctggagctcaaggagtcaccttgccttgcattatcccc
gactcatttggtccatcaggatttcctggagctcctggattcccaggttctaagggaact
cggggcctccctggaattccaggcaagcctggcactcatggaagcaaaggagagcctgga
agtccagggttaatacatctcccaggattgccaggatttcctggagctcgtggggacaag
ggattgcccgggtttcctggtcttcctggaaaagatggctaccctgggaaagctggcagt
caagggttaccaggttccaagggagctgctggtgacatctttggtgcagaaaatggtgct
tcaggggagcaaggtctacaggggttgccaggggacaaaggatttcctggagactctggc
ctcccaggaccccaaggtttgaatgggaaatctggtatgctaggcccaaaaggtgagcgg
ggcaacccaggaacatcaggacccccaggacagcctggaccctcagggtctactgatcta
attggcatcaagggcacatatggaatcccaggagcaccaggccttccaggcatttcaggg
catcctggaaagaaaggtcaaagaggagacataggtcaccctgggtcaaatggaaaaaga
ggtctagctgggataaaaggccttcctggtcctcaagggtcaactggcttcctggggagc
ccaggtttgtcaggagtcactgggttgccaggcatcccaggccaaaagggcgaaaagggg
tcctctggaccggcagggtttcctgggttacctggacttcctggtcttcctggagctgat
ggattaaagggattttctgggtcgtttggaaaggtgggacaacctggacaggctggtatc
cctggagaaaaaggagacagaggagatccagggccagttggcatatctagtccaagacct
ccaatgctaaacctttggttcaaaggagaaaaaggctctcaaggttctgctggatcggat
ggatttcctgggcccagaggtgacaaaggagagcccggcatcccagggttaccaggccca
ccaggatctcctggacagtccaataccatcaaaggactcaatgggaatccaggttcccct
ggatctatgggaagaaggggattacctggcctgaaggggtctctggggattgcaggtttc
ccaggaatgccaggaaaaagtggttcacagggactcatcggcacttctggcctcctggga
gcaactggtgtcccaggtttaaaaggagatcaaggccaaacacttggcatttctggaagc
ccaggacccaagggacaacctggcgagttaggttttaaaggtgtcaaaggaaaagatgga
ctagctggtgatagaggttacccaggaaacaaaggcgatgttggaaaagttggtattgct
ggagatcctggcttccctggctccccaggacttcaaggaatttcaggtatgattggagac
ccaggcctcccaggttcctctggccttctgggatcaattggccaccctggaccctctggc
ttaataggacctaaaggattccctggacatcctggtttacatggactgaatggacttcca
ggcaccaagggcacccatggcactccaggagccagtatcactggtgttcctgggccagct
ggcctgcctggtcccaaaggggaaaggggagtgccaggaactgtcatcggagatccaggg
aatcaaggatcaaggggacaaaaaggtgaccaaggttccccaggtcttcaaggtcctgct
ggtacccctggagccccaggcatctccttgccctcagtcatagcaggacaacctggtgac
cctggacggtcaggcctagatggagaacgaggccgcccaggccttccaggtcctccaggt
ccccctggaccatcctcagatcaaggcgatcctggagactctggcttccctggaattcca
ggccttcaagggttcaagggaaaccaaggacttccaggtttctctggcctctctggagat
ctagggctcaaaggcatgagaggggaacctggcctcatggggactcctggcaagattggg
ccaccgggagacccaggatttcctgggatgaaggggaaggctgggccaagaggctttgct
ggccccaggggtgcaccaggacacacaccaattgctgaagctatgcaggttcctccagga
cctttgggtctgccaggcattgatggcattccaggcctcataggagatcctgggtctcaa
ggctttgtgggtctgcaaggttccaaaggcctacctggcatccctggcaaggatggcccc
agtgggcatccgggcccatctggaatccttggtgatcctggtctccctggactacaggga
cctccaggatttgaaggagctccaggaaatcagggccccattgggcagcctgggaggcct
gggcacagtgtgagagtgggctacacactagtaaaacacagtcagtcagaacaggtgcca
ctatgccccatcgggacgagcaggctctgggtgggttacagcttgctgttcgtggagggg
caggagaaagcccataaccaagatctgggatttgctggttcctgcctgccccgattcagc
accatgcccttcatctactgcaacatcaacgaagtgtgccactatgccagacgcaatgat
aaatcctactggctctccactactgcccccattcccatgatgcctgtgggccagacgcag
attccccagtatatcagccgctgctctgtatgtgaggcaccctcacaagccattgccgtg
cacagtcaggacatcactgtcccacagtgccctctgggctggcacagcctctggattgga
tactccttcctcatgcacactgctgctggggctgagggtggaggccaatccctagtctcc
cctggctcctgtcttgaggacttccgggccactcctttcatcgagtgcagcggtgtccgt
ggtacctgccactactttgccaacaagtacagtttctggctgacaacggtggaggagaga
gggcagtttcgggaagagcctgtgtctgagacgctgaaaactgggcagcttcacaccagg
gtgagccgctgccaggtgtgtatgaaaaacctgtag
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