Apodemus sylvaticus (European woodmouse): 127676064
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Entry
127676064 CDS
T10613
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asyl01002
]
127676064
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127676064
Enzymes [BR:
asyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127676064
Peptidases and inhibitors [BR:
asyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127676064
Ubiquitin system [BR:
asyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127676064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
127676064
NCBI-ProteinID:
XP_052027949
LinkDB
All DBs
Position
Y
Genome browser
AA seq
2556 aa
AA seq
DB search
MTITTRGSPVGENESQGQTPDGQPQPSFQQNQISSSDSSNENSPATPPDEQGQGDAPPQH
EEEDPSFPHADLAKLEDMINRPRWVVPVLPKGELEVLLEASMDLTKKGLDAKSEACQRFF
RDVLTVSFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPFLELLAMALNP
HCKFHVYNGARPCESVSSSLQFPEDELFACSPDLHSPKGWLVDLINTFGTLNGFQILHDR
FISGSALNVQTIAALIKPFGQCYEFLTQHTLKKYFIPVIEVVPQLLQKLTNEELKKEAKT
EVKNDAISMIIKFLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINK
VLSSVSYYTHRHGNSEEEWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILRFVI
KEKALTLQDLNNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASK
KQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALGAHIKILDYSCS
QDRDTQKIQWIDCFIEEFRTNNKWVIPALKQIKEICSLFGEAPQNLSQTHRSPHVFYRHD
LISQLQHNHALVTLVAENLATYMNSIRLYARDHEDYDPQTIRLGSRYSHVQEVQERLNFL
RFLLKDGQLWLCASQAKQIWNCLAENAVYFSDREACFMWYSKLMGDEPDLDPDINKEFFE
SNVLQLDPSLLTENGIKCFERFFKTVNCREGKLMIKRKVYMMDDLDLIGLDYLWKVVIQS
NDDISSRAIDLLKEIYTSLGPRLQANQVVIHEDFIQSCFDRLNASYDTLNVLDGDKDNNF
SCARQEAIRMVRILTVLREYISECDSDYHVERMILPMSRAFRGKHLSFTVRFSNQGKEVD
DLDILSHTNATIGSVRRCILSRMNANVAQTKLELFIGGELIDSEDDRKLVEQLNLKDKSL
ITAKFIQINSNVPSSPDSSSDSSAGSPGNHSNNNYRNIPNPEMEKYLPGVIMSLQPKYIS
FLWQVADLGSVLTMPTLRDGARILMKLMPPDSTTIEKLRAVCSDHINLGERRLGQSLHSL
FFGSSASQVLYLTEVVYTLLMPAGGPLADISSDFQYHFLKSGGLPLVLSMLIQNNFLPNT
DVETRRDAYFSALKIAKLLLTTIGYGHVQAIAEACQPVADGTDPKTPINQVTHDQAVVLQ
NALQSIPNPSSECMLRNVSLRLAQQISGLASRYIPDICVIRAIQKIIWASGCGSLELVFS
PNEDITETYKMTTSTRGNPEVKDEQVCCEALEVMTLCFALIPTAMDSLSKEKAWQSFVID
LLLYCPSKTIRQLAQEQFFLICTRCCMGHRPLLFFITVLFTILGSAATEKAKHSDVYFPL
LRRLLTYAYNSNIHVPNVDVLLNDEIDWLKRVRDYIKNTGETSVEDPILEGHLGVTKELL
SFQTPEKKYHIGCKTGGANLVKELIDDFIFPASKAYLQYMRSGELPTKQAIPVCGSPATV
NAGFELLVALAFGCVRNLKQIVNCLTELFYIGIPVTTCEALAEWEYLPPVGPRPPKGFVG
LKNAGATCYMNSVIQQLYMIPSIRNSILAIESIWNDTDDDIFKDEKQDSENNVDPRDDVF
GYPHQVEDKPILSKVEDRKEYNIGVLKHLQITFGHLAASQLQYYVPRGFWQQFRLWGEPV
NLREQHDALEFFNSLVDSLDEAFKALGHPTVLSKVLGGSFADQKICQGCPHRYECEESFT
TLNIDIRNHQNLLDSLEQYIKGDLLEGANAYHCEKCDKKVDTVKRLLIKKLPSVLAIQLK
RFDYDWERECAIKFNDYFEFPRELDMEPYTVAGATKLEGDSVNPQTQLIKQNEQSESVIP
GSTKYRLVGVLVHSGQANGGHYYSYIIQRNGKDNKRSRWFKFDDGDVTECKMDDDEEMKN
QCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDITDENDEMRAYISELTITRPH
QIMSPAIERSVWKQNVQFLHNQMQFSLEYFQFIKKLLTCNAVYLNPAPGQDHLLPEAEDI
TMISIQLAARFLFTTGFHTKKIVRGPANDWYDALCILLRHSKNVRFWFAHNVLFNVSNRF
SEYLLECPSAEVRGTFAKLIVFIAHFSLQDGSSPSSFTSAFATPGPYSQIYDNLSLSDHL
LKAVLSLLRREVSEHGRHLQQYFNLFIMYASLGLAEKTQLLKLNVPATFMLVSLDEGPGP
PIKYQYAELSKLHSIVSQLIRCCSVSSRMQSSINGNPPLPNPFGDPNLSQPIMPIQQHVA
DILFMRTTYVKKVIEDCSNSEETVKLLRFCCWENPQFSCSVLSELLWQVAYSYAYELQPY
LDLLLQIILLEDSWQAHRIHNALKGIPNDRDGLFDTIQRSKNHHQKRAYQCIKWMVTLFN
SCPVAYQILQGNGDLKKKWTCAVEWLGDELERKPYSGNPHYTYSNWSPPVQSNETASGYF
LERSQSAKMTLAKACDLCPEEDPDDRDAPDEHESPAQQDRTFYLYSHRSQYQQNYVPEQP
YSGPAAHHLNNPQKNDEPQETQESSEEITSSLIKDQ
NT seq
7671 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcacaactcgtggctctccagtaggagagaatgagagccagggacagactcca
gatggacaacctcagccttctttccaacagaaccagatctcatcatctgattcttccaat
gagaattctccagcaactcctccagatgaacaaggccaaggtgatgctccaccacagcac
gaagaggaggatccttcatttcctcatgctgacctggcaaagttagaagacatgatcaac
aggccccgatgggtggttcctgttttgccaaagggggagttagaagtacttttagaagct
tctatggatcttactaaaaaaggccttgatgctaaaagtgaagcatgccagcggtttttt
cgagatgttttaactgtgtcttttaccaaaatcctcatggatgaggcagtgagtggatgg
aagtttgaaattcataggtgtattattaataatacccatcgcctagtggagctttgtgtg
gccaaattgtctcaggactggtttccatttctagaacttctagcaatggctttaaatcct
cattgcaaatttcatgtctataatggtgcacgtccatgtgaatccgtgtcctcaagtctt
cagtttcctgaagatgaactctttgcctgttctccagacctacattcgccaaagggttgg
ttagtggatctcattaacacatttggcacactaaatggtttccagattttgcatgatcgt
ttcattagtggatcagcattaaatgtccaaacaattgcggctcttattaagccatttgga
cagtgctatgagtttcttactcaacatacattaaaaaagtacttcattcctgttatagaa
gtggttccacaattattacaaaaattaactaatgaagaactgaaaaaagaagcaaagact
gaagtgaaaaatgatgccatttcaatgattattaaatttctaaaaaatttagcttcaaga
attccgggacaagaggaaactgttaaaaatttagaaatttttaggttaaaaatgatactc
agattgctacagatttcttcttttaatggaaagatgaatgcactgaatgaaattaacaag
gtgctatcaagtgtgtcatattatacccatcgacatggcaattctgaagaagagtggcta
actgctgagcgaatggcagagtggatacaacagaacaatatcttatccattgtcttgcaa
gatagcctacatcaacctcagtatgtggaaaagctagagaagattcttcgttttgtaatt
aaagaaaaggctcttactttacaggatcttaataacatctgggcagcacaggctggaaaa
catgaagctattgtgaaaaatgtacatgatttactagcaaaattggcttgggatttttct
cctgaacaacttgatcatctttttgattgctttaaggcaagctggacgaatgcaagtaaa
aaacaacgtgaaaaactccttgaattgatacgtcgccttgcagaagatgataaagatggt
gtaatggcacacaaagtgttgaatcttctttggaatctagctcacagtgatgatgtgcct
gtagatatcatggatctggctctcggtgcccacataaaaatactcgattatagttgttcc
caggatcgagatacccaaaaaatccaatggatagactgctttatagaagaatttcgaaca
aataataaatgggttatccctgcattaaaacaaattaaagagatttgtagtttgtttggt
gaagcacctcagaatttaagtcaaactcatcgaagtcctcatgtattttatcgtcatgac
ttaatcagccaacttcagcataatcatgctttagttactttggtagcagaaaaccttgca
acttacatgaacagcataagattgtatgctagagatcatgaagattatgacccacaaacg
ataagactaggaagtagatacagtcatgttcaagaagtccaagaacggcttaatttcctc
agattcttattgaaggatggtcaactctggctctgtgcttcccaggcaaaacaaatatgg
aactgtttagcagagaatgcagtttactttagtgatcgagaagcctgctttatgtggtat
tctaaattaatgggcgatgaacctgacttggatcctgatattaataaggagttttttgaa
agtaatgtgcttcagcttgatccttctctattaactgaaaatggaataaaatgttttgaa
agatttttcaaaactgttaattgtcgagaagggaaactaatgataaaaagaaaagtttat
atgatggatgatttggacttaataggattagactatctttggaaggttgtcattcagagt
aacgacgatatttcaagcagagcaatagatctccttaaagagatatacacaagccttggt
cccagattacaagctaatcaggtagtaattcatgaagactttattcaatcttgctttgat
cgcttgaatgcctcatatgatacactgaatgttttggatggtgataaagacaataatttt
agctgtgcaagacaagaagccatccggatggttcgcatattaacagttttaagggaatac
ataagtgaatgtgacagtgattatcatgtggaaaggatgattctacctatgtcaagagca
tttcgtggtaaacacttgtcgtttacagttcgattttcaaaccaaggcaaagaagttgat
gatttggatatactatctcatacaaatgctaccattggttctgtgcgacgctgcattctc
agtcgtatgaatgccaatgtagcccagacaaaacttgaactgtttataggtggagagttg
atagattctgaagatgacagaaagctagttgaacagttaaatttgaaagataaatcacta
attactgctaaatttatacaaataaattccaacgtgccttcaagtcctgatagctcatct
gattcatcagctggatctcctggaaaccacagtaataataactacagaaatattcccaat
ccagaaatggaaaagtatttacctggggtgataatgtcactgcagcccaaatacatatct
ttcctttggcaagttgcagacttaggtagtgtgttgactatgccaactcttagagatgga
gcaagaatacttatgaaacttatgccaccagatagcacaaccatagagaaattaagagct
gtatgttcagaccatataaatcttggagaaagacgacttggtcaatctcttcactcactt
ttctttggttcttctgcctcccaagtactatatttaacagaggtagtttacaccttgtta
atgcctgctggtggacctctggctgatatttcctctgactttcagtatcacttcttgaaa
agtggtggcttacccctggtacttagtatgctgattcagaataacttcttaccaaataca
gatgttgaaactcgtagagatgcttacttcagtgcccttaaaatagccaaactgttgtta
actaccattggctatggccatgtccaggccatagcagaagcttgtcagcctgtggcagat
ggtacagatcctaaaacaccgattaaccaggttactcatgatcaagctgtggtgctacaa
aatgcccttcagagtattcctaatccttcttctgagtgcatgcttagaaatgtatcactc
cgtcttgctcaacaaatatcagggctggcctcaagatacatacctgatatttgtgttatt
agagctatacaaaaaattatctgggcatcaggatgtggatcattagagctagtatttagt
ccaaatgaagatatcacagaaacttacaagatgaccaccagtacaaggggcaatccagaa
gtgaaagatgaacaggtttgctgtgaagccctggaagtgatgacattatgttttgcttta
attccaactgctatggattcactcagtaaagaaaaggcctggcagtcatttgtcattgac
ttactattgtactgtcctagcaaaactatacggcagttggcacaggagcagttcttttta
atatgtaccagatgttgcatgggacatagacctctgttgttcttcattactgtactcttc
acaattttggggagtgcggcaacagagaaggctaaacattcagatgtctacttcccactt
ttaaggcgtcttctgacttatgcttacaacagcaacattcatgtacccaatgttgatgtt
cttctcaatgacgaaattgattggcttaaaagggttagggattacattaaaaatacagga
gaaacaagtgtagaagacccaatcttagaaggccatctgggagtaacaaaagagttacta
tcttttcagactcctgagaaaaaatatcatattggttgtaaaacaggaggtgctaatctt
gttaaagaattaattgatgatttcatctttcctgcatccaaggcttacctgcagtatatg
agaagtggggaactgccaaccaagcaagctattccagtttgtggttcaccagctacagtt
aatgctggttttgaactacttgtagctttggcttttggttgtgtaaggaatcttaaacag
atagtaaactgtttgactgaactgttttacataggcataccagtaactacttgtgaagcc
cttgctgaatgggaatatttaccacctgttggaccccgcccaccaaaaggatttgtggga
ctgaaaaatgctggtgctacttgttatatgaactctgtgatccaacagctctacatgatt
ccttcaatcaggaacagtattcttgcaattgaaagcatatggaatgatacggatgatgat
atattcaaagatgaaaagcaggacagtgagaataatgttgatcccagagatgatgtattt
ggatatcctcatcaagttgaagataaaccaatattaagtaaagtagaagatcgaaaagag
tacaacattggtgttttaaaacatcttcagataacctttggacatttagctgcttctcaa
ctacaatactatgtgccaagaggattttggcaacaattcagactttggggtgaacctgtt
aatctacgtgaacaacatgatgcattagagttttttaattctttggtggatagtttagat
gaagcttttaaagcattaggacatccaactgtgcttagtaaagtccttggaggatccttt
gctgatcagaagatttgtcaaggctgcccacataggtatgaatgtgaagaatcttttaca
acattaaatatagacattagaaatcaccaaaatcttcttgattctttagaacagtatatt
aaaggagatttattagagggtgcaaatgcatatcactgtgaaaaatgtgataaaaaggtt
gatacagtaaagcgcttactgattaaaaaactaccctctgttcttgctatccaactgaaa
cgatttgactatgattgggaaagagaatgtgcaatcaaattcaatgattactttgaattt
ccaagagaattggatatggagccttatacagtagcaggtgccacaaagctggaaggtgac
agtgtaaatccacagactcaattgattaagcagaatgagcagtctgaaagtgtgatacca
ggaagcacaaaatatagacttgttggtgtgcttgttcacagtggtcaagcaaatggtgga
cattattattcttatatcattcaaagaaatggtaaagacaataagagaagtcgctggttc
aaatttgatgatggagatgtaacggaatgtaaaatggatgatgatgaagaaatgaaaaat
caatgctttggtggagaatatatgggagaagtttttgatcatatgatgaagcgtatgtca
tacaggcgtcagaaaagatggtggaatgcttatattcttttttatgaacggatggatata
actgatgaaaatgatgagatgagagcatatatatcagagctaacaatcaccagaccccat
cagattatgtcaccagccattgaaagaagtgtgtggaaacagaatgtgcaattcctgcat
aaccaaatgcagtttagcttagaatattttcagtttattaaaaaactgcttacatgtaat
gctgtgtacttaaaccctgctccaggacaagatcacttgctgccagaagcagaagatatc
acaatgatcagcattcagcttgctgctagattcctctttactactggatttcatactaag
aaaatagtccgtggacctgccaatgactggtatgatgcactgtgtattctcctccgtcac
agcaagaatgtacgtttttggtttgctcataatgtcctttttaatgtatcaaatcgcttc
tctgagtaccttctggaatgtccaagtgcagaagtcagaggtacatttgcaaagcttata
gtatttattgcacatttttctttgcaagatggatcttctccttcatcttttacatcagct
tttgcaactccaggaccttatagtcagatatatgacaatttaagcttgagcgatcattta
ctaaaagcagtattaagtctcttgaggagggaagtttctgaacatgggcgacatttacaa
caatatttcaatttatttataatgtatgccagtttaggtttggcagaaaagacccagctt
ctaaaactgaatgtacctgcaacctttatgcttgtgtctttggatgaaggaccaggaccc
ccaattaaatatcaatatgctgaattaagcaagttacattcaatagtgtctcaactaatc
cgatgttgcagtgtctcatcaagaatgcagtcttcaatcaatggtaacccccctcttcca
aatccatttggtgacccaaatttatcacagcctataatgccaattcagcagcatgtggct
gacattttatttatgagaaccacttatgtgaagaaagttattgaagactgcagtaactca
gaggaaacagtcaaattacttcgcttctgctgctgggagaatccccagttttcatgttct
gttctcagtgaactgctatggcaggttgcatattcatatgcatatgaacttcaaccatat
ttggatctacttttgcaaattattctgcttgaggactcttggcaagctcacagaattcat
aatgcacttaaaggaattccaaatgatcgagatggcctgtttgatacaatccagcgctcc
aaaaatcaccatcaaaaaagagcctatcaatgtataaaatggatggtaactctctttaac
agttgtcctgttgcctaccagatcttacagggtaatggagaccttaaaaaaaagtggacc
tgtgctgtggaatggcttggagatgaacttgaaagaaaaccatattctggcaatcctcac
tacacttacagcaactggtctcctccagtacaaagcaatgaaacagcaagtggttatttt
ttagagagatctcagagtgcaaaaatgacacttgcaaaagcttgtgacctgtgtccagaa
gaggaccctgatgaccgagatgccccagatgagcatgagtcacctgcacaacaagataga
acattttatctttattctcacagatctcagtatcaacagaattatgtacctgaacagcca
tattcaggtccagcagcacatcacttgaataaccctcagaaaaatgatgaaccacaagaa
actcaggaaagcagtgaagaaataacttcatctctaataaaggatcagtaa
DBGET
integrated database retrieval system
