KEGG   Apodemus sylvaticus (European woodmouse): 127676085
Entry
127676085         CDS       T10613                                 
Name
(RefSeq) lysine-specific demethylase 5D isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:asyl01009]
    127676085
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:asyl03036]
    127676085
Enzymes [BR:asyl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     127676085
Protein phosphatases and associated proteins [BR:asyl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127676085
Chromosome and associated proteins [BR:asyl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127676085
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD PHD_ash2p_like
Other DBs
NCBI-GeneID: 127676085
NCBI-ProteinID: XP_052027965
LinkDB
Position
Y:631824..695686
AA seq 1548 aa
MKPASDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERKILDLYSLNKIVV
EEGGYEAICKDRRWARVAQRLNYPSGKNIGSLLRSHYERIIYPYEMFQSGANLVQCNTDP
FDSEEKDKEYKPHSIPLRQSVQPSKFSCCSRRAKRLQPEPEPTEEDIEKNPELKKLQIYG
AGPKMIGLGLMAKEKTLKKKDSIQPDKEVTCPATVVVKGEASEFGKVTSAFSDKNLNHSF
EPCTRMTMQLRNNHSSTQLMASYVCRICSRADEDERFLLCDGCNDNYHIFCLLPPLSEVP
KGIWKCPKCILAECKRPPEAFGFEQATQEYTLQSFGEMADSFKADYFNMPVHMVPTEVVE
KEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWNLSPEEKEYATSGWNLNVMPVL
DQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAA
EHLEDVMKRLTPELFESQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYH
SGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNL
AVAVHKEMFIMVQEERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY
DCPDGLVCLSHINDLCKCSRSRQYLRYRYTLDELPAMLQKLKTRAESFDNWANKVQAALE
VEDGRKRSLEELRALESEAHDRRFPNSDLLQRLKKCLTEAETCISQVLGLISNSEDRLET
PQITLTELQILLKQMGTLPCTMHQIDELKDVLQEVETYQIETREALTSLPYSLEILQSLM
EKGQQLRVEVPEAHQLEELLEQAKWLDQVKQALAPSGQRHSLVIMKKLLVMGTKVASSPS
VNKARAELQELLTIAERWEEKAHLCLEASQKHSPATLEVIIREAENIPVYLPNIQSLKEA
LTKARAWIADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKA
SKTFLKKNSCYTLLEVLCPCADAGSVSTKRSRWIEKEMGLYKYDTELLGLSAQDLRDPGS
LIMAFKEGEEKEKEGILKLRHINSAKPSPMSSPMNASATSICICGQVRAGVEALQCDLCH
DWFHGQCVTVPHLLRSLRASHTSSQLLAWWEWDTKFLCPLCMRSRRPRLETILTLLVGLQ
RLSVRLPEGEALQCLTERAIGWQGRARQALASEDVTALLKQLAKSRQQLQDELRHEQPPT
LPSGLESDCLTEDSGKDILKEEEELVLNEDRLKSSEKIVPNENSCERDEELLPSLLSQLT
GPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQNPNLERIHTLLELEKPEN
PGNWSEEQTPERRRRRRRQKVVLSRKGEEFTQKELEIKRVRSSRIKPKGEKFQEPIHGDN
VLLTHHTEHTNILKEHMNSVQGKDTSPSSSFPSLTPLRHLSYFHQQKL
NT seq 4647 nt   +upstreamnt  +downstreamnt
atgaagccagcatctgacgactttctaccgccgcctgagtgcccggtgtttgagcccagt
tgggcggaattccgagatcctctcggctatatagctaaaatcagacccattgcggagaag
tcaggtatttgcaagattcgcccacctgcggattggcagccaccttttgctgtagaagtt
gataacttcagatttactcctcgaattcagaggctaaatgaattggaagcccagactaga
gtaaagctaaactatttggatcagattgcaaaattctgggaaattcaaggttcttcctta
aagatacctaatgtggagagaaagatcttggacctttacagccttaataagattgtggtg
gaggaaggtgggtatgaagcaatctgcaaggaccgccgttgggcccgtgttgctcaacgc
cttaattacccatctggtaaaaacattggttccctgctacgatcccactatgaacggatc
atttacccttatgaaatgtttcagtctggagctaatcttgtgcaatgtaacacagatcca
tttgacagtgaagaaaaagacaaggaatacaaacctcatagcatccctcttagacagtct
gttcagccatcaaaattcagttgctgcagtagacgagcaaaaaggctacagcctgagccg
gaacccacagaagaagacattgagaaaaacccagagctaaagaaactacagatatatggg
gcaggtcccaagatgataggcttgggtctcatggctaaggagaagactctgaaaaagaaa
gatagcatacaaccagataaagaagtgacatgtcctgcaactgttgtagtgaagggggaa
gccagtgagtttggaaaagtgacatcagcattttctgacaagaatttaaatcacagtttt
gaaccttgtacgaggatgactatgcagctacggaacaatcacagcagtacccagcttatg
gcttcatatgtttgccgaatatgctctcgtgcggatgaagatgagaggtttctgctctgt
gatggctgtaatgataattaccacatcttttgcctactgccaccactttctgaagttccc
aagggaatatggaagtgcccaaagtgtatcttagcggagtgtaaacgtccccctgaagct
tttggctttgagcaagctacacaggagtataccttacagagttttggtgagatggctgat
tccttcaaggctgactacttcaacatgcctgtacatatggttcctacagaagttgtggaa
aaggaattctggaggttggtgagcagcatcgaggaggatgtgacagttgagtatggagca
gacattcactccaaagaatttggcagtgggtttcctgtcaacaatagcaaatggaactta
tcccctgaagaaaaggaatatgctaccagtggttggaatctcaatgtgatgccggtgctg
gatcagtctgttctttgccacatcaatgcagacatctcaggcatgaaagtgccctggtta
tatgtgggcatggtgttttcagcattttgttggcatattgaggatcactggagttattcc
attaactacctgcactggggtgaaccaaagacctggtatggagtaccttctttagcagca
gaacacttggaggatgttatgaagagacttacaccggagttgtttgagagccagcctgac
ctcctgcaccaacttgtcacactgatgaatcccaacactctcatgtcacatggagtgccg
gttgttcgtacaaaccagtgtgcaggagaatttgtcattactttccctcgtgcttaccac
agtggctttaaccaaggctataactttgctgaggcagtgaacttttgcactgccgattgg
ctacctgttggacgccagtgtattgaacattaccgccggctccggcgctattgtgtcttc
tcccatgaggagctcatctgcaagatggctgcattcccagagaagttggatctaaatcta
gcagtggcagttcacaaggagatgttcattatggtacaggaggagcgacgcctacgaaag
accttgttggagaagggcatcacggaagctgagagagaggcctttgagctactcccagat
gatgagcgtcagtgcatcaagtgtaagaccacgtgtttcctatcagccttggcctgttat
gactgtccagatggtcttgtctgcctttcccatatcaatgatctgtgcaagtgctcaaga
agccgacagtacttacgatacaggtacacattggatgaattgcctgctatgctacaaaag
ctgaagactcgggctgagtcatttgacaattgggccaacaaagtacaagcagccctagag
gtcgaggatggacggaaacggagtttagaagagctaagagcactggaatctgaagctcat
gatagacgatttcctaatagtgacctacttcagcgattgaagaaatgcctaactgaagca
gagacttgcatttcccaagttctaggactgatcagtaactcagaggacaggttagaaaca
ccacaaatcaccctgactgaactacagattcttctcaaacagatgggcactctgccctgt
accatgcatcagattgatgaacttaaggatgttcttcaagaggtggaaacataccaaatt
gagacccgtgaggctcttacttcactgccttatagtttagaaatacttcagtccctgatg
gaaaagggtcagcagcttcgtgtggaagtgcctgaagctcatcaacttgaagagttgttg
gagcaggcaaaatggttagatcaagtaaagcaggccttggctccctctggccagcggcat
tctctggtcatcatgaagaagcttttagttatgggaaccaaagtagcctccagcccttct
gtgaacaaagctcgagcagagttacaagaactgctgactattgccgaacgttgggaggaa
aaggcccatttgtgcttagaagctagccaaaagcattctccagccactttggaagttata
atacgagaggcagaaaacatccctgtctatctgcctaacatccagtctctgaaggaagct
ctgactaaggcacgggcttggattgctgatgtaaatgagattcaaaatggtgatcactac
ccttgtttggatgatttggagggccttgtagctgtgggtcgggatttacctgtggagctg
gaggaactgagacagctggagaatcaggtactgacagcacattcctggaaagagaaagct
tctaagacttttctcaagaagaattcttgttacacacttttggaggttctctgcccatgt
gcagatgctggttcagtcagtaccaagcgcagtcggtggattgaaaaggagatggggtta
tacaaatatgacacagaattgctggggctgtctgcacaggacctcagggacccagggtct
ctgatcatggcctttaaggaaggggaagagaaagaaaaggaaggtatcttgaagttacgt
cacatcaactcagccaagcccagtccaatgtcctcaccgatgaatgcctctgcaacctcc
atctgtatatgtgggcaggtccgtgcaggagtggaagctctgcagtgtgatctctgtcat
gactggttccatggacaatgtgtgactgtaccccatctactcaggtcactaagggccagt
catacctcatctcaactgctagcttggtgggaatgggacaccaaattcctgtgcccactg
tgcatgcgatcaaggcgtccacgcctggagaccatcttgacattgctagtaggactacag
agactgtctgtaaggctgcctgagggtgaggccctacagtgcctcacagagagagccatt
ggttggcaaggtcgtgccagacaggctctagcttctgaggacgtgactgctttgttgaaa
caactggcaaaatcccgccaacaactacaggatgaattgagacatgagcagccccctacc
ttgccttcaggccttgagtctgactgtctcacagaggatagtggcaaggatattcttaag
gaagaggaggagttggtactaaatgaagacaggttgaaaagttctgagaagattgttcca
aacgaaaattcatgtgaaagagatgaggaactgctgccttcgcttttatcccaattaact
ggtccagtactggaactgcctgaagctacccgggcccccctagaggaacttatgatggaa
ggagatctacttgaagttaccctagatgagaaccacagcatttggcagctgctgcaggct
gggcagaatcctaatctagagcgaattcatacacttctagagcttgagaagcctgagaat
ccagggaattggtcagaggaacagacaccagagaggcggcggcggcggcggaggcaaaaa
gtggttctgagcagaaagggtgaggagtttactcaaaaagaactagaaataaaaagagtc
cggagttcaagaattaagcctaagggagaaaaatttcaagaaccaatacatggggacaat
gtgctcttgacacaccatacagaacatacaaacatcttaaaagagcacatgaacagtgta
caaggaaaggatacaagcccttcatcttcttttccttccctaacacctttgcgacatcta
tcttattttcatcagcaaaaattataa

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