Apodemus sylvaticus (European woodmouse): 127676312
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Entry
127676312 CDS
T10613
Symbol
Dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127676312 (Dhx34)
Enzymes [BR:
asyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127676312 (Dhx34)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
127676312 (Dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
AAA_16
ResIII
Motif
Other DBs
NCBI-GeneID:
127676312
NCBI-ProteinID:
XP_052028170
LinkDB
All DBs
Position
1:207421520..207445725
Genome browser
AA seq
1146 aa
AA seq
DB search
MPPPRTREGRDHRDREHHRAPREEEASEKWDWNCPETRCLLEDVFFRDEDYIRRGSEECQ
KFWAFFERLQRFQHLKTSQKEEKDPGRPKHGIAALADLPRTYDPRYRINLSILSPDTRGR
HGPGRGLPPERVSEFRRALLHYLDFQQKQAFGRLAKLQRERAALPIAQYKNRILQTLKEH
QVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGY
QIRFESTRSAGTKVTFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRL
LPQRPDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEAEQAASKSEKLD
PRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEISTVLDAAQAYASLTQRWVVLPLHSALS
VADQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEF
WISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVG
DPRTFPFIEPPPPASVETAVLYLRDQGALDSLEALTPIGCLLAQLPVDVVIGKMLILGSM
FSLAEPVLTIAAALSVQSPFTRSAQNNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSE
RSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLEDHGLLSGAQAVAPEDSYSRLQQRRER
RALQQLKRQHEEGGGRRRKVLRLQEDGCSSDEDLEGSASQRADSIDIQDVKFKLRHSLEQ
LRAAASSAQDLSREQLALLKLVLGRGLYPQLAVPDAFNSGRKDSDQIFHTQAKQGTVLHP
TCVFANSPEVLHTQGQEASCGEGSQDGKNHMSCKHQLLAFVSLLETNKPYLVNCVRIPAL
QSLLLFSRSIDTNGDCSRLVADGWLELRLTDSESAVRLLATSLRLRARWESALDRQLARQ
AERRKLEQEEAEDTGSPAVSAQEVAALSRELLQFMAAKVPYCLRRLTGLEAQNLYVGPQT
ITAAPSLPGLFGNSTLSPHPTKGGYAVSDHLTYNCLTSDTDLYSDCLRSFWTCPHCGLHM
PFTPLERMAHENTCPEALSDGPESEEAAPAAAQKTSALQRPYHCQVCGQDFLFTPTEVLR
HRRQHV
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccaggacgagggagggcagggatcaccgagaccgagaacaccaccgggct
cccagggaggaagaggcctcggagaaatgggactggaattgtccagagactcgttgcctc
ttggaagatgtattcttccgcgatgaggattatatccgtcgtggatcagaggagtgtcag
aagttctgggctttctttgaacgcctgcagagattccagcacctcaagacctcccagaag
gaggagaaggaccctggccgtcccaaacatggcatcgctgctttagccgacctacctcgc
acttacgacccacgctaccgtatcaacctctctattctcagcccagacacgcggggtcgc
catgggcccggcagggggctgccccctgagagagtgtcggagttccgccgtgcgctgctg
cattacttagacttccagcagaagcaagcttttgggaggctcgccaaactgcagcgcgag
cgagcggcgcttcccatcgcccagtacaagaaccgcattctgcagactctcaaggagcac
caggtggtggtggtggctggggacacgggctgtggcaagtccactcaggtgccccagtac
ttactggctgccggcttcagtcacgtggcgtgcacgcagccccgaagaatcgcctgcatc
tcactggccaagcgcgttggcttcgagagcctcagtcagtatggctcccaggtcggctac
cagatccgctttgaaagcactcggtcggcgggcaccaaggtcacgttcctgacggtgggg
ctgctcctccgccagatccagcgtgagcccagcctgccccagtaccaggtcctgattgtg
gacgaggtgcacgagcggcacctgcacaatgacttcctgctgggcgtcctgcagcgcctg
ctgccccagcggcccgacctcaaggtcatcctcatgtcggcaaccatcaacatctctctc
ttctccagctacttcagccacgctcccgtggtgcaggtgcctgggaggctcttccccatc
acggtagtgtaccagccgcaggaggccgagcaggcagcatccaagtcagagaagctggac
ccacggcctttcctgagggtgctggaggccatcgacaataagtatccccccgaggagcgc
ggggacctccttgtcttcctcagtggcatggcagagatcagcacggtgctggacgctgcc
caggcttacgccagcctcacccagcgctgggtggtgctgccgctgcacagcgccctctct
gtggctgaccaggacaaggtgttcgacgtggctccagctggagtacggaagtgcatcctg
tccaccaacattgctgagacctcagtcaccatcgacggcatccgtttcgtggtggattct
gggaaggtgaaggagatgagctacgacccacaggccaaactgcagcggctgcaggaattc
tggatcagccaggccagcgccgagcagcgcaagggccgcgcgggccgcaccggccctggc
gtctgctaccgcctctatgccgagtctgactatgatgcctttgctccatacccagtcccg
gaaatccgcagggtggccctggatgccctggtgcttcagatgaagagtatgagcgtgggg
gacccacgcaccttccccttcatcgagccccctccacctgccagcgtggaaactgccgtc
ctctacctccgagaccagggggccctggacagcttggaggccctcactcccatcgggtgc
ctgctggcccagctgcctgtagacgttgtgattgggaagatgctgatcctgggctccatg
ttcagcctggccgagcctgtgctcaccatcgccgccgcccttagcgtccagtcaccattc
acccgcagtgcccagaacaacctggactgcgccaccgcccggaggcccctggaaagcgac
cagggtgaccccttcacactcttcaatgtcttcaatgcctgggtgcaggtgaagtctgag
cggagcggaaactctcggaagtggtgccgccgccgtggtgtggaggaacaccggctgtat
gagatggccaacctgcggcgccagttcaaggagctgttggaggatcatgggctgctgagt
ggggcccaggccgtggccccagaggacagctacagccggctgcagcagcgccgggagcgc
agggccctgcagcagctgaagcggcagcacgaggagggtgggggacgcaggcgcaaggtg
ctgaggctgcaggaggatggctgctccagcgacgaggacctcgagggctctgcctcccag
cgcgctgacagcatcgacatccaggatgtgaaattcaagcttcgccacagcctggagcag
ctccgggcagccgccagctcagcccaggacctgagccgagagcagctggccctcctcaag
ctggtgctggggcgcggcctgtacccgcagctggccgtgcccgacgccttcaacagtggc
cgcaaggactcggaccagattttccacacgcaggccaagcagggcaccgtgctgcacccg
acctgtgtctttgccaacagccctgaggtattgcacacccagggccaggaggcctcctgc
ggggaagggagccaagatggcaagaaccacatgagctgcaagcaccagctgctggccttc
gtgtccctgctggagaccaacaagccgtacctggtgaactgcgtccgcatccccgccctc
cagtccctcctgctgttcagccgctccattgacaccaacggtgactgctcccgtctggtg
gccgacggttggctggagctgcggctcacggacagcgagagtgctgtccggctcctggcc
acgtccctgcggctccgcgcccgctgggaaagcgccctggaccggcagctcgcccgccag
gcggagcgccggaagctcgagcaggaggaggccgaggacacggggtctccagcagtgagc
gcccaggaggtggcagctctgagcagggagctgctgcagttcatggcggccaaggttccc
tactgcctccgaaggctcactggtctggaagcccagaacctctacgtgggaccccagacc
atcacggccgcccctagtctgcctgggctctttggaaattctaccctgtccccgcacccc
accaaggggggatacgctgtctctgatcatctcacctacaactgcctcacgagtgacact
gacctgtacagtgactgtctgcgttccttctggacctgccctcactgtggcctgcacatg
ccgttcacacccctggagcgcatggctcacgagaacacctgccctgaggcactgagcgat
ggtccagagtctgaggaggctgctcctgcagcagcacagaagacatcagccctgcagaga
ccctaccactgccaggtgtgcgggcaggacttcctcttcacgcccactgaggtgctaaga
caccgaaggcagcacgtgtga
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