Apodemus sylvaticus (European woodmouse): 127677560
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Entry
127677560 CDS
T10613
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03015
mRNA surveillance pathway
asyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127677560
09123 Folding, sorting and degradation
03018 RNA degradation
127677560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127677560
03041 Spliceosome [BR:
asyl03041
]
127677560
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127677560
mRNA cycle factors
Stress granule specific factors
127677560
Spliceosome [BR:
asyl03041
]
Complex C
Other components
Complex C specific factors
127677560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_Nup35
RRM_MARF1
RBD_RDR6
RRM_fung
POP1_C
DHHA1
Motif
Other DBs
NCBI-GeneID:
127677560
NCBI-ProteinID:
XP_052028580
LinkDB
All DBs
Position
2:124474822..124476804
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AA seq
660 aa
AA seq
DB search
MNAAASSYPMTSLYVGDLHPDVTEVMLYEKFSTVGPVQFIRVCRDMITYSSLGYAYVNFQ
NSADAERALDTMNFEEIKGKPMRIMWSERDSSLRKSGVGNVFIKNLDKSIDNQALYDTFS
AFGNILSCKVVCDENSSKGHAFVHFDTQEAADQAIERLNGKILNDRKVFVGKFKSRQERE
AELGTKAKEFTNVYIKNLGEEVDDGALKELFGQFGKTLSVKVMRDSSGKSKGFGFVSYEK
HENANKAVEEMNGKEIGGKAIFVGRAQKKIQRQAELKRKFEQLKRERIRQYQGVNLYIKN
LDDTIDDDRLRKEFSRFGSITSAKVMLERGRSKGFGFVCFSSPEEASKAVTQMNGRIVGS
KPLYVALAQGKEERKAHLTSQYMQRLTGMRTLPANAILNPFCPAAGGYYVPEVPQAQGRP
PYYMPNQLARMRPNKRGKRGRRPQGFQGMPRAPPQSGPRPALRHLAPTGKAPASGGLPPT
AHRVGSKSLNSLAMGFGGAGAAQQGLADSYQSGGVPTAVPTLAPPATVAATAPRAVAPHK
DASSVRSPHPVIQPLQAPQPAVHVQRQEPLTASMLAAVPPEEQKQMLGDRLFPLIQTMRS
KLAGKITGMLLELDNSELLRMLECPETLRAKVDEAVEVLKTHRAKTEAAQKVEAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcagccagcagctaccccatgacctccttatacgtgggcgatctgcacccg
gacgtcaccgaagtcatgctgtatgaaaagttcagcactgtggggcctgtgcagttcatc
cgagtctgccgcgacatgatcacctacagctctctgggttatgcctatgtcaacttccag
aactcagctgacgctgagagggccttggacaccatgaactttgaagagattaagggaaaa
ccaatgcgcatcatgtggtctgagagggattcctctttgagaaagtctggcgtgggaaat
gtctttatcaagaacctggataagtctatagacaaccaggcgctgtacgacactttctct
gcctttgggaacatcctgtcctgtaaggtggtttgtgatgagaacagctctaagggccat
gcctttgtccacttcgatacccaagaggcggcggaccaggccattgagaggctgaacggc
aagattctcaatgaccgcaaagtgttcgtgggcaaattcaagtctcgccaagagcgggaa
gccgagcttggcacaaaggccaaggaattcaccaacgtttacatcaaaaacttaggagaa
gaggtggatgatggggcgctgaaagagctcttcggccagtttggtaagaccctaagtgtc
aaggtgatgagagactcgagtggcaagtccaaaggctttggctttgtaagttatgagaaa
cacgagaacgccaacaaggctgtggaagaaatgaatggaaaagaaataggtgggaaagcc
atattcgtaggccgcgcgcagaaaaaaatacaacgtcaggctgaactaaaacggaaattc
gagcagctgaagcgggagaggattagacagtaccaaggagtgaatctctacattaagaac
ttggatgacaccattgatgatgacagactaaggaaagagttttctcggtttggatccatc
accagtgcgaaggtgatgctagaaagaggaagaagcaaagggtttggctttgtctgtttc
tcctctcctgaagaggcaagcaaagctgtcacccagatgaacggacgcattgtgggctcc
aagccgctgtatgtcgccctggcccaggggaaggaagagcggaaggctcacctgactagc
cagtatatgcagcgcttgactgggatgagaacactccctgccaacgccatcttaaatcca
ttttgtcctgcagctggtggctattatgtgcccgaagttccacaggcgcagggaagacct
ccatattacatgcctaaccagttagcacggatgaggcctaataaacgggggaagcgaggc
aggaggcctcaaggcttccaaggaatgccaagggctccgccgcagtctgggcctcgtcca
gctcttcgacatctggctccaactggtaaagctccggcctctggtggccttcctcctacc
gctcacagagtcgggtctaagagcttgaacagcttggctatgggctttggtggggctggc
gccgcccagcaagggctggctgacagctaccagtctggaggcgtccctacagccgtgcca
acccttgcacctcccgctacagttgctgccactgctcccagggctgtggctccacacaag
gatgcctccagtgtccgcagccctcaccctgtcattcagccgctgcaggccccccagcct
gcagtccatgtccagcgtcaggagcccctgactgcctccatgctggccgcagtgcccccc
gaggaacagaagcagatgctgggggaccgtttgtttcccctgatccaaacaatgcgttca
aagctggcaggaaaaattaccgggatgctgctggaactcgacaactcggagctgctgcgc
atgctcgagtgccccgagaccctccgtgccaaggtggatgaagctgtggaggtcctgaag
actcatcgtgccaagacagaagctgcccagaaggtggaggctgttgctgctgctacctct
tag
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