Apodemus sylvaticus (European woodmouse): 127677575
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Entry
127677575 CDS
T10613
Symbol
Cntn6
Name
(RefSeq) contactin-6
KO
K06761
contactin 3/4/5/6
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asyl04515
]
127677575 (Cntn6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asyl00537
]
127677575 (Cntn6)
Cell adhesion molecules [BR:
asyl04515
]
Immunoglobulin superfamily
Contactins
127677575 (Cntn6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asyl00537
]
Others
127677575 (Cntn6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Sp38
V-set_CD47
Ig_4
C2-set_3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
127677575
NCBI-ProteinID:
XP_052028591
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All DBs
Position
2:135992470..136209299
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AA seq
956 aa
AA seq
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MTYHYRLDGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKTRSTV
SVREGQGVVLLCGPPPHFGELSYAWTFNDNPLYVQEDKRRFVSQDTGNLYIAKVEPSDVG
NYTCFVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFAL
GNPVPDISWRRLDGSPMPGKVKYSKSQAILEIPKFQQEDEGVYECIAGNLRGRNLAKGQL
IFYAPPEWEQKIQNTYLSIYDSLYWECKARGNPNPSYMWLKNGERLHTEERTQIENGTLF
ITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECK
PNAFPKASISWKRGTENLKQSKRVLFLDDGSLKICNVTRSDAGSYTCVATNQFGHGKSSG
SLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFE
RIGGKSVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISST
TSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQGVATVPEILNGQTYNATVIGLSPWVEYE
FRVVAGNSIGIGEPSKPSELLRTKASVPSVAPVNINGGGGSRSELVITWESIPEELQNGE
GFGYIIMFRPVGSTTWMKERVALVESSKFIYRNESIMPLSPFEVKVGVYNNEGEGSLSTV
SIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMI
GKIRVSGNVTTKNITGLRANTIYFASVRAFNTAGTGPSSPPVNVTTKKSPPSQPPANIAW
KLSNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHVLETNNTSAELLVPFEEDYLI
EIRTISDGGDGSSSEEIRIPKMSSLSSTGVQILKPSTQFLSMVGVFYCFAIYLLSR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcactataggttggatggaggcagtctggccatcagcagccccagaacagat
caagatattggtatataccagtgtctggccaccaatccggtcggcaccattctgagtaga
aaagccaaactacagtttgcatatattgaagactttgaaaccaaaaccagaagcacagta
tctgtccgagaaggtcaaggcgtggtactcctctgtggtccaccaccacattttggagaa
ttatcatatgcctggaccttcaacgataacccgttgtatgttcaagaggacaagcgaaga
tttgtatctcaagacacagggaacttgtacattgccaaagtagaaccatctgatgtgggc
aattatacttgctttgtcacaaacaaagaggcccatagaagtgtccaaggtccacctaca
cctttagtgcagcgcactgatggtgtcatgggtgaatatgagccaaagattgaagtgcgt
tttcctgaaacaatacaagctgcaaaggattcatctgtaaaactggaatgctttgccctt
ggaaatccagtccctgatattagttggagaaggttggatggaagcccgatgccagggaaa
gtcaagtacagcaaatcccaagctatccttgaaatccctaagttccaacaagaggatgaa
ggcgtctatgagtgcatcgcaggtaaccttcgagggagaaatcttgcaaagggtcaactc
attttctatgctcctccagaatgggaacagaaaatccaaaatacatacctttctatctat
gacagcttgtattgggaatgcaaagctcgtggaaatccaaatccttcctatatgtggcta
aagaatggtgaacgtctccacacagaagagagaactcagattgaaaatgggactcttttc
atcaccatgctgaatgtgtcagactctgggatctaccagtgtgctgcagaaaacaaatat
cagacaatttatgcaaatgcagaattaagagttttagcctcagctccagatttctcaaaa
aatcccattaaaaagatttcagttgttcaagttggcggtgacatttctattgaatgcaaa
ccaaatgcttttcccaaagcatctatttcctggaaaagaggaacagagaacctgaagcaa
agtaaaagagttttattcctggacgatggaagccttaagatatgcaatgttaccagatca
gatgctgggtcttacacctgtgtagccacaaatcaatttggccatgggaaaagcagtggc
agtctcattgtgaaagagagaacagtcattacagtaccaccatctaaaatggatgttaca
gttggagagagtatcgtcttaccctgccaagtgtctcatgacccgacaatggaagttcta
tttgtttggtattttaatggagatatcattgatttaaagaaaggagtggctcattttgaa
cgaattgggggaaaatctgttggggatttgatgataaggaatattcaattaggccattca
ggaaaatatctgtgcacagtacaaacaacactagaacgcttgtctgctgttgctgatatt
attgtgagaggtccccctggtcccccagaagatgtaaaagtggagcacatctcgagtacc
acctcccagctcagctggagacccggtcctgataataacagccccattcaaatttttact
attcaaactcggacaccattttctgttggctggcaaggggttgctacagtccctgaaatt
ctcaatggacagacatacaatgcaacagtcattggtttgagtccttgggtagaatatgaa
tttcgcgttgttgctgggaacagcattgggattggagagccaagcaaaccctcagagttg
ctgagaaccaaagcatcagtccccagtgtggcaccagtaaatatcaatggaggcggtgga
agcagatcggaacttgtcattacgtgggagtccattccagaagaactacagaatggagaa
gggtttggatatatcatcatgttccggccagtgggctcaacaacctggatgaaagaaagg
gtggctcttgtagaatcatcaaagttcatctatagaaatgaaagcatcatgcccctgtct
ccctttgaagtcaaagtgggagtgtacaataatgaaggagaaggatctttgagtaccgtg
tccattgtctactctggggaagatgaacctcaactggccccaagaggaacttctgtccag
agtttttctgcttctgaaatggaggtttcctggaatgccattgcttggaatagaaacact
gggagagtgctgggctatgaggtcttatactggacagacaactccaaagaatctatgatt
ggtaaaattagagtcagtggaaatgtgacaaccaagaacataactgggttaagagctaat
acgatttactttgcctctgtgagagcctttaacactgcagggaccggaccctcaagtccg
ccagttaatgtcaccaccaaaaagtcccctcctagccaaccaccagcaaacattgcatgg
aagctgtcaaattctaaattatgcttgaactgggagcatgtaaaaactatggaaaatgag
tctgaagtgctgggctataagatcctctatcggcagaaccgacagagtaaaactcatgtt
ttagaaacaaataatacatcagctgaacttctggttccgtttgaagaagactatttgatc
gaaatcagaaccatcagtgatggtggagatggaagcagtagcgaagaaatcagaattcca
aaaatgtcaagtttgagttccacgggagttcagatcttgaagcccagtacccagttcctg
tcaatggttggagttttttactgttttgctatttacctactttcacgatga
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