Apodemus sylvaticus (European woodmouse): 127677778
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Entry
127677778 CDS
T10613
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
127677778 (Rorb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asyl03000
]
127677778 (Rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
asyl03310
]
127677778 (Rorb)
Transcription factors [BR:
asyl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127677778 (Rorb)
Nuclear receptors [BR:
asyl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127677778 (Rorb)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
DUF7217
Motif
Other DBs
NCBI-GeneID:
127677778
NCBI-ProteinID:
XP_052028747
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Position
1:43574837..43619698
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AA seq
385 aa
AA seq
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MSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALARVYSSSISNGLSNLN
TETGGTYANGHVIDLPKSEGYYNIDSGQPSPDQSGLDMTGIKQIKQEPIYDLTSVPNLFT
YSSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKS
REALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPL
NNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAW
LIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSH
PDIVNTLFPPLYKELFNPDCAAVCK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagatgctgtaaagttcgggaggatgtccaagaagcagcgggacagcctgtat
gctgaagtgcagaagcatcagcagaggctgcaggagcagcggcagcagcagagtggggag
gcggaggcccttgccagggtgtacagcagcagcattagcaatggcctcagcaacctgaac
accgagaccggcggcacctacgccaacgggcacgtcattgacctacccaagtccgaaggt
tattacaacatagattccggtcagccgtctcccgatcagtcaggactggatatgactgga
atcaaacagataaagcaagaacctatctatgacctcacatccgtacccaacttgtttacc
tatagctctttcaacaacgggcagttagctcctgggataacaatgtctgagatcgatcga
attgcacagaacatcattaagtcccatttggagacatgtcagtacacaatggaagagcta
catcagctggcatggcagacccacacctatgaagaaataaaggcgtatcaaagcaagtcc
agggaggctctgtggcaacaatgtgccatccagatcacccacgccatccagtacgtggtg
gagttcgcaaagcggataacaggcttcatggagctgtgtcagaacgatcagatcttactt
ctgaagtcaggttgcttggaagtggttttagtgagaatgtgccgtgccttcaacccatta
aacaacactgttctgtttgaaggaaaatatggaggaatgcaaatgttcaaagccttaggt
tctgatgacctagtgaatgaagcatttgacttcgcgaagaatctgtgttccttgcagctg
actgaggaggagattgctctgttctcctctgctgtgctgatatccccagaccgagcctgg
ctgatagaaccaagaaaagtccagaagcttcaggaaaaaatttattttgcacttcaacat
gtgattcagaagaatcacctggatgatgagaccctggcaaagttaatagccaagatacca
actatcacggcagtctgcaacttgcatggggagaagctgcaggtatttaagcagtctcat
ccagacatagtgaatacactgtttcctccattgtacaaggaactctttaatcctgactgt
gctgcggtctgcaaatga
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