Apodemus sylvaticus (European woodmouse): 127678209
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Entry
127678209 CDS
T10613
Symbol
Smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03082
ATP-dependent chromatin remodeling
asyl04714
Thermogenesis
asyl05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127678209 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
127678209 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
127678209 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asyl03021
]
127678209 (Smarcd3)
03036 Chromosome and associated proteins [BR:
asyl03036
]
127678209 (Smarcd3)
Transcription machinery [BR:
asyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127678209 (Smarcd3)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127678209 (Smarcd3)
PBAF complex
127678209 (Smarcd3)
GBAF(ncBAF) complex
127678209 (Smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
127678209
NCBI-ProteinID:
XP_052028965
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All DBs
Position
2:5054355..5085285
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AA seq
533 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQGQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQV
KRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSH
DKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDI
DVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYV
QDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKVMRAWSMGLPPLQP
YKPCRSLTWHQPFCLCPIPVHRPTSPCSGLLAPRRSRGRVAGGCSPGHSPGPL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccgaatgccccaccagggg
gcgcccatgggccccccgggctccccgtacatgggcagccccgcggtacgacccggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagccag
gcacagggccagggccagcccgtgcccaccgccccagcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggattcgggagctggtccccgagtcccag
gcctacatggacctcctagcattcgagaggaaactggatcaaaccatcatgcgaaagcgg
gtggacatccaggaggccctgaagaggcccatgaagcaaaagagaaagctgcgcctttat
atctccaatactttcaaccctgcgaagcccgatgccgaagactccgatggcagcattgcc
tcctgggagctgcgggtagagggaaagctcctggatgatcccagtaagcagaagaggaag
ttttcttccttcttcaagagtttggtcattgagttggacaaagacctttatggcccagac
aaccatcttgtggagtggcaccggacgcccacaacccaggagacagatgggttccaagta
aagagaccaggggacctgagcgtgcgctgcacgctgctcctgatgctggactaccagcct
ccccagttcaaactggacccgcgcttggcccggctgctggggctgcacacgcagagccgc
tcagccattgtccaggcgctgtggcagtacgtgaagaccaacaggctgcaggactcccat
gacaaggagtacatcaacggagacaagtactttcagcagatttttgactgtccccgcctg
aagttttctgagattccccagcgcctcacagccctgctgctgccccctgacccaattgtg
atcaaccatgtcatcagtgtggacccatcagaccagaagaagacagcgtgctatgacatt
gacgtggaggtagaggaaccgctgaaggggcagatgagcagcttcctcctgtccacggcc
aaccagcaggagatcagtgccctggacagtaagatccatgagacaattgagtccataaac
cagctcaagatccagagggacttcatgctaagtttctccagagaccccaaaggctacgtc
caagacctactccgctcccagagccgtgatctcaaggtgatgacagatgtggccggtaac
cctgaagaagaacgcagggctgagttctaccaccagccctggtcccaggaagccgtcagc
cgctacttctactgtaaggtaatgcgggcctggagcatgggccttcctcccctccagccc
tacaagccttgccgctcgctcacctggcaccagcctttctgcctgtgcccaatacctgtc
caccggcccacgtccccatgcagtggtctcctggctcccagacgctcccggggacgggtg
gcaggagggtgtagccctggtcactcaccaggaccactgtaa
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