Apodemus sylvaticus (European woodmouse): 127678298
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Entry
127678298 CDS
T10613
Name
(RefSeq) phosphatidylcholine translocator ABCB4 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl02010
ABC transporters
asyl04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127678298
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
127678298
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asyl02000
]
127678298
Enzymes [BR:
asyl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127678298
Transporters [BR:
asyl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127678298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
RsgA_GTPase
AAA_5
Zeta_toxin
AAA_29
AAA_7
G-alpha
SbcC_Walker_B
AAA_14
nSTAND1
DUF815
nSTAND3
DUF2207_C
NTPase_1
Motif
Other DBs
NCBI-GeneID:
127678298
NCBI-ProteinID:
XP_052029102
LinkDB
All DBs
Position
2:complement(19053375..19112294)
Genome browser
AA seq
1278 aa
AA seq
DB search
MDLEAARNGTARRLDGDFELGSISNQGREKKKKVNLIGPLTLFRYSDWQDKLFMLLGTVM
AIAHGSGLPLMMIVFGEMTDRFVDNTGNFSLPVNFSLSMLNPGRILEEEMTRYAYYYSGL
GGGVLVAAYIQVSFWTLAAGRQIKKIRQKFFHAVLRQEMGWFDTQGTTELNTRLTDDISK
ISEGIGDKVGMFFQAIATFFAGFIVGFIRGWKLTLVIMAISPILGLSTAVWAKILSTFSD
KELAAYAKAGAVAEEALGAIRTVIAFGGQDKELERYQKHLENAKKIGIKKAISANISMGI
AFLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSILIGAFSVGQAAPCIDAFANARGA
AYVIFDIIDNNPKIDSFSERGHKPDSIKGNLEFSDVHFSYPSRANIKILKGLNLKVKSGQ
TVALVGNSGCGKSTTVQLLQRLYDPTEGTISIDGQDIRDFNVRYLREIIGVVSQEPVLFS
TTIAENIRYGRGNVTMEEIKKAVKEANAYDFIMKLPQKFDTLVGERGAQLSGGQKQRIAI
ARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTVRNADVIAGF
EDGVIVEQGSHSELMKKEGIYFRLVNMQTSGSQILSEEFEVALNDEKAAGGVAPNGWKAR
VFRNSTKKSLKSSRAHQNRLDVEANELDTNVPPVSFLKVLKLNKTEWPYFVVGTICAIAN
GALQPAFSIILSEMIAIFGPGDDAVKQQKCNMFSLVFLGLGVLSFFTFFLQGFTFGKAGE
ILTTRLRSMAFKAMLRQDMSWFDDHKNSTGALSTRLATDAAQVQGATGTRLALIAQNTAN
LGTGIIISFIYGWQLTLLLLSVVPFIAVAGIVEMKMLAGNAKRDKKEMEAAGKIATEAIE
NIRTVVSLTQERKFESMYVEKLHGPYRNSVRKAHIYGITFSISQAFMYFSYAGCFRFGAY
LIVNGHMRFRDVILVFSAIVFGAVALGHASSFAPDYAKAKLSAAYLFSLFERQPLIDSYS
GEGLWPDKFEGSVTFNEVVFNYPTRANVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQL
LERFYDPMAGSVLLDGQEAKRLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRTVSH
EEIVRAAKEANIHPFIETLPQKYDTRVGDMGTQLSGGQKQRIAIARALIRQPRVLLLDEA
TSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIENGRVKEQGTHQQLLA
QKGIYFSMVHIQAGTQNL
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaggcagcgagaaacggaacagcgcggcgcctggacggcgactttgaacta
ggcagcatcagcaaccaaggcagagaaaagaagaagaaagtgaatttaattggcccgttg
acactgttccggtactctgactggcaggataaactgtttatgctcctgggcacggtcatg
gccatagctcacgggtcaggtcttcctctcatgatgatagtctttggagaaatgacagat
aggtttgtagataatactggaaacttttccttgccagtgaatttttcattgtcaatgcta
aatccaggaagaattctggaagaagaaatgactagatatgcatactactactcaggccta
ggtggtggagttcttgtggctgcctatatccaagtctcattctggactttggcagccggc
cgacaaataaagaaaatcaggcaaaaattttttcatgctgtcctcagacaagaaatgggc
tggtttgacacccagggcaccacggaactcaacacacggctgacagatgacatctccaaa
atcagtgaaggaattggtgacaaggttggaatgttctttcaagcaatagccacgtttttt
gcaggattcatagtgggcttcatcagaggatggaagttgactctcgtgatcatggccatc
agccccatcctggggctctctacagcggtctgggcaaagatactctccacatttagtgac
aaagaactagctgcctatgcaaaagcaggggcggtggccgaagaggctctgggagccatc
aggaccgtgatcgctttcgggggccaggacaaagagctggaaaggtatcagaaacattta
gaaaatgccaaaaagattggaattaaaaaggctatctcggccaacatctccatgggcatt
gccttcttgttaatatatgcatcctatgcactggccttctggtatggatccactctggtt
atatcgaaagaatatacaattggaaatgcaatgacagtcttcttctctatcctcattgga
gctttcagtgtgggccaggctgccccctgtattgatgcttttgccaatgcaagaggagcg
gcctatgtcatctttgacattattgataataaccctaaaattgacagtttttcagagaga
ggacacaagccagacagcatcaaaggaaatctggagttcagcgatgttcacttttcctat
ccatctcgggctaatatcaagatcttgaagggcctcaacctgaaggtgaagagtggacag
acggtggccctggttggcaacagcggctgtgggaaaagcacaactgtccagctgctgcag
aggctctacgaccccacagagggtacgattagcattgacgggcaggacatccgggacttc
aacgtcaggtatctgagggaaatcattggtgtggtgagtcaggagccggtactgttctct
accacgattgctgaaaatatccgctatggccgtgggaacgtaacgatggaggagataaag
aaagctgtcaaagaggccaacgcctatgacttcatcatgaaactgccgcagaaatttgac
accctggttggtgagagaggggcacagctgagtgggggacagaaacagagaatcgccatt
gcccgggccctggtccgcaaccccaagatccttctgctggacgaggccacctcagccctg
gacacggaaagcgaggctgaggtgcaggccgctctggataaggccagagaaggccgaacc
accattgtgatagctcaccgactgtctacagtccggaatgcagatgtcatcgctgggttt
gaggatggagtcatcgtggaacaaggaagtcacagtgaactgatgaagaaggaggggatc
tacttcagacttgttaatatgcagacatcaggaagccagatcctttcagaagaatttgaa
gttgcgctaaatgacgaaaaggctgctggaggcgtggccccaaatggctggaaagcacgt
gtatttaggaattctacgaagaaaagtcttaaaagttcacgagcgcatcagaataggttg
gatgtagaagccaatgaacttgatacaaacgtgccaccagtgtcttttctgaaggtctta
aaactgaataaaacagagtggccctactttgtggtgggaacaatctgtgccattgccaac
ggggccctccagccggctttctccatcatcctgtcagagatgatagcaatctttggccca
ggggatgacgcagtgaagcagcaaaagtgtaacatgttctcgctggtcttcttgggcctg
ggagtcctctccttctttactttcttccttcagggcttcacattcgggaaagctggagag
atcctcaccacaaggctcaggtccatggcctttaaagcaatgctgaggcaggacatgagc
tggtttgatgatcataaaaacagtactggtgcactttctacaaggctcgccacagatgct
gcgcaagtccaaggagccacgggaaccaggttggctttaattgcacagaacacagccaac
cttggaactggtattattatatcatttatttacggttggcaactgacacttctgctgtta
tcggttgttccattcattgctgtcgcaggaattgttgaaatgaaaatgttggctggcaat
gccaagagagataaaaaggaaatggaggctgctggaaagattgcaacagaggcaatagaa
aatattcggactgttgtatccttgacccaagaaagaaaatttgagtcaatgtatgttgaa
aaattgcacggaccttacaggaattcagtgcggaaggcacacatctacggcatcactttc
agcatctcacaagctttcatgtatttttcttatgctggctgttttcgattcggtgcttac
ctaatcgtgaatgggcatatgcgcttcagagatgtcattctggtgttttcagcaatcgtg
tttggcgcggtggctctaggacacgccagttcatttgctccagactatgcaaaagctaag
ctgtctgcagcgtacctgttcagcctgtttgagagacaacctctgattgacagctacagt
ggagaagggctgtggcctgataagtttgaaggaagcgtgacatttaatgaagtcgtgttc
aactatcccacccgggccaacgtgccagtgctccaggggctgagcctcgaggtgaagaag
ggccagacgctggccctggtgggcagcagcggctgcgggaagagcacagtggtccagctg
ctcgagcgcttctacgaccccatggccggatcagtgctcctagatggtcaagaagcaaag
cgactgaacgtccagtggctgcgagctcagctgggcatcgtgtcccaggagcccatcctg
ttcgactgcagcatcgccgagaacatcgcctatggagacaacagccggaccgtgtctcac
gaggagattgtgagggcggccaaggaggccaacatccaccccttcatcgagacgctgccc
caaaaatacgacacaagagtaggagacatggggacgcagctctctggaggccagaagcag
aggattgccatcgcccgagccctcatcagacagccccgggtcctgctgctggatgaagcc
acctcagctctggatactgagagcgaaaaggttgtccaggaagcgctggacaaagccagg
gaagggcgcacctgcattgtgatcgcgcaccgcctgtccaccatccagaacgcagacttg
atcgtggtgattgagaacggccgggtgaaggagcagggcacgcaccagcagctgctggca
cagaaaggcatctacttctccatggtccacattcaggccggcacacagaacttatga
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