KEGG   Apodemus sylvaticus (European woodmouse): 127678299
Entry
127678299         CDS       T10613                                 
Name
(RefSeq) ATP-dependent translocase ABCB1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl02010  ABC transporters
asyl04976  Bile secretion
asyl05206  MicroRNAs in cancer
asyl05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    127678299
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    127678299
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    127678299
  09162 Cancer: specific types
   05226 Gastric cancer
    127678299
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:asyl02000]
    127678299
   04147 Exosome [BR:asyl04147]
    127678299
   04090 CD molecules [BR:asyl04090]
    127678299
Enzymes [BR:asyl01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     127678299
Transporters [BR:asyl02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    127678299
Exosome [BR:asyl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127678299
CD molecules [BR:asyl04090]
 Proteins
  127678299
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_16 RsgA_GTPase AAA_22 Rad17 Zeta_toxin AAA_5 AAA AAA_28 G-alpha AAA_29 AAA_14 APS_kinase AAA_7 PRK AAA_15 DUF815 NTPase_1 DUF2207_C DUF3487
Other DBs
NCBI-GeneID: 127678299
NCBI-ProteinID: XP_052029106
LinkDB
Position
2:complement(19241707..19387898)
AA seq 1276 aa
MELEEDLNGRADKNFSKMGKKSKKEKKEKKPAVSVLTMFRYAGWLDRLYMLVGTLAAIIH
GVALPLTMLVFGDMTDTFANVGNFPQNDTNASYFNYTDVYANLEEEMTTYAYYYTGIGAG
VLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINE
GIGDKIGMLFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKEL
QAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNHNLEEAKKLGIKKAITANVSMGAAFL
LIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYE
VFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVA
LVGNSGCGKSTTVQLMQRLYDPIEGVVTIDGQDIRTINVRYLREIIGVVSQEPVLFATTI
AENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARA
LVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGG
VIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACESKDEIGNLDMSSKDSGSSLIR
RRSTRKSIRGPHDQDRKLSTTEALDEDVPPASFWRILKLNSTEWPYFVVGVFCAIINGGL
QPAFSIIFSKVVGVFTKVESPEAQRRDSNLFSLLFLVIGIISFITFFLQGFTFGKAGEIL
TKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAIIAQNIANLG
TGIIISLIYGWQLTLLLLAIVPIIAIAGVIEMKMLSGQALKDKKKLEGSGKIATEAIENF
RTVVSLTREQKFEAMYVQSLQVPYRNALKKAHIFGITFAFTQAMMYFSYAACFRFGAYLV
ARELMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSASHIIRIIEKMPEIDSYSTE
GLKPNVLEGNVKFSGVQFNYPTRPNIPVLQGLNLEVTKGQTLALVGSSGCGKSTVIQLLE
RFYNPMAGTVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRTVSQEE
IERAAKEANIHPFIETLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRRPHILLLDEATS
ALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEQGTHQQLLAQK
GIYFSMVHIQAGAKRS
NT seq 3831 nt   +upstreamnt  +downstreamnt
atggaacttgaagaggaccttaacggcagagcagacaagaacttctcaaagatgggcaaa
aagagtaaaaaggagaagaaagaaaagaaaccagcagtcagtgtgcttacaatgtttcgc
tatgcaggctggctggacaggttatacatgctggtaggaactctggctgccattatccat
ggagtggcactcccacttacgatgctggtctttggagatatgacagatacctttgcaaat
gtaggaaacttcccacaaaacgatactaatgcaagttatttcaattacacagacgtctat
gccaacctggaggaagaaatgaccacgtatgcctactattacaccgggattggtgctggg
gtgctcatagttgcctacatccaggtttctttctggtgcctggcagctggaagacaaata
cacaagatcaggcagaagtttttccatgctataatgaatcaggagataggctggtttgac
gtgcatgacgtcggggagctcaacacccggctcacagatgatgtctccaaaattaatgaa
ggaattggcgacaaaattggaatgctctttcaggcaatggcaacattttttggtggtttt
ataataggatttactcgtggctggaagctaacccttgtgattttggccatcagccctgtt
cttggactgtcagctggcatttgggcaaagatattatcttcatttactgataaggaactc
caggcttatgcaaaagctggagcagttgctgaagaagtcttagcagccatcagaactgtg
attgcatttggaggacaaaagaaggaacttgaaaggtacaatcacaatttggaagaagct
aaaaagctggggataaagaaagctatcacggccaatgtctccatgggcgcagctttcttg
ctcatctatgcgtcatatgcgctggcattctggtatgggacctccttggtcatctcaaag
gagtactccattggacaagtgctcacggtcttcttctctgtgttaatcggagcattcagt
gttggacaggcatctccaaacatcgaagccttcgccaatgcaagaggagcagcttatgaa
gtcttcaaaataattgataacaagcccagtatagacagcttctcaaagagtgggcacaaa
ccagacaacatacaaggaaatctggaattcaaaaatattcacttcagttacccatctcga
aaagaagttcagatcttgaagggcctcaacctgaaggtgaagagcggacagaccgtggct
ctggttggcaatagcggctgtgggaaaagcacaactgtccagctgatgcagaggctctac
gaccccatcgagggcgtggtcactatcgacggacaggacatcaggaccatcaatgtgagg
tatctgcgggaaatcattggtgtggtgagtcaggaacctgtgctgtttgccaccacgatc
gccgagaacattcgctatggccgagaagacgtcaccatggatgagattgaaaaggctgtc
aaggaagccaatgcctatgacttcatcatgaaactgccccacaaatttgacaccctggtt
ggtgagagaggggcacagctgagtgggggacagaaacagagaatcgccattgcccgggcc
ctggtccgcaaccccaagatccttctgctggacgaggccacctcagccctggatacagaa
agcgaggctgtggtgcaggctgctctggataaggctagagaaggccggaccaccattgtg
atagctcaccgcttgtctacagttcgtaatgctgacgtcattgctgggtttgatggtggt
gtcattgtggagcaaggaaatcatgatgagctcatgagagagaagggcatttacttcaaa
cttgtcatgacacagacagcaggaaatgaaattgaattaggaaatgaagcttgtgaatct
aaggatgaaattggtaatctagacatgtcttcaaaagattccggatccagtctaataaga
agaagatcaactcgcaaaagcatccgtggaccacatgaccaagacaggaagcttagtacc
acagaggccctggatgaagatgtacctccagcttccttttggcggatcctgaagctgaat
tcaactgaatggccttattttgtggttggtgtattttgtgccataataaatggaggcttg
caaccagcattctccataatattttcaaaagtcgtaggggttttcacaaaagttgaatcc
ccagaagcccagcggcgggacagcaacttgttttccttattgtttctggtcattggtatc
atttcttttattacattttttcttcagggcttcacatttggcaaagctggagagatcctc
accaagcgactccgatacatggttttcaagtccatgctgagacaggatgtgagctggttt
gatgaccctaaaaacaccacaggagcactgaccaccaggctcgccaacgatgctgctcaa
gtgaaaggggctacagggtctaggcttgctattattgcccagaacatagcgaatcttgga
acagggatcatcatatccctaatctacggctggcaattgacacttttactcctagcaatt
gtacccatcattgctatagcaggagtgattgaaatgaaaatgttgtctggacaagcactg
aaagataagaagaaactagaaggttctgggaagattgcaacagaagcaattgaaaacttc
cgcactgtcgtctctttgactcgggagcagaagtttgaagctatgtatgttcaaagcttg
caggtaccatacagaaatgctttgaagaaggcacacatcttcgggatcacattcgccttc
acccaggccatgatgtatttttcctatgctgcttgtttccggtttggcgcctacttggtg
gccagagaactcatgacttttgaaaatgttctgttagtattctcagctattgtctttgga
gccatggcagtggggcaggtcagttcattcgctcctgactacgcgaaagccaaggtgtcg
gcatcccacatcatcaggatcattgagaaaatgcccgagattgacagctacagcacggaa
ggcctgaagcctaatgtgttggaaggaaatgtgaaattcagtggagtccagttcaactat
cccacccgacccaacatcccagtgctccaggggctgaacctcgaggtgacgaagggccag
acgctggccctggtgggcagcagcggctgcgggaagagcacagtgatccagctgctcgag
cgcttctacaaccccatggccggaacagtgtttctagatggcaaagaaataaagcaactg
aacgtccagtggctgcgagctcagctgggcatcgtgtcccaggagcccatcctgttcgac
tgcagcatcgccgagaacatcgcctacggagacaacagccggaccgtgtctcaggaggag
atcgagagggcggccaaggaggccaacatccaccccttcatcgagacgctgccggataaa
tacaacaccagagtaggagacaaaggaactcagctgtcgggtgggcagaagcagcgcatc
gccatcgcacgcgccctcgtcagacggcctcacattttgcttctggacgaagcaacatca
gctctggatacagaaagtgaaaaggttgtccaggaagcgctggacaaagccagggaaggg
cgcacctgcattgtgatcgcgcaccgcctgtccaccatccagaacgcagacttgatcgtg
gtgattcagaacggcaaggtgaaggagcaaggcacgcaccagcagctgctggcacagaaa
ggcatctacttctccatggtccacattcaggctggagcaaagcgctcatga

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