Apodemus sylvaticus (European woodmouse): 127678333
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Entry
127678333 CDS
T10613
Symbol
Vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127678333 (Vps50)
Membrane trafficking [BR:
asyl04131
]
Protein recycling
Others
EARP complex
127678333 (Vps50)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
127678333
NCBI-ProteinID:
XP_052029161
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All DBs
Position
2:27293782..27407707
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AA seq
964 aa
AA seq
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MQKIKSLMTRQGLKSPPESLTDLGAFESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEETAAASEG
SNVMSTAEATFDRGYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIVS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNHHRIRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFLEQSRSPSVSPSKQPSTTSSKSVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQDYDSDSDVPEELKRDYVDEQTGDVPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLKTTLNRIQESLIDLEGSADPTVTLTAAEERKEKVPSPHLNQLVILTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDALLKEFEQFNKRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctcatgacccggcagggtctgaagagccctccggagagcctc
actgatctcggtgcctttgagagccttcgggtccctggaaaggaggaattcagggaactt
cgagaacagccaagcgaccctcaagctgaacaagagttaattaatagtattgagcaagtc
tatttttctgcggacccatttgatattgttaaatatgagttggagaagcttcctcctgtt
ctcaatctgcaagaattagaggagtacagagacaaattaaagcaacagcaagctgcagtc
tctaaaaaagtggcagatttgattcttgaaaaacagcctgcttatgtaaaggagcttgaa
agagttacatcactgcagaccggtcttcagttggctgctgttatctgcacaaatgggagg
agacacttgaatattgcaaaagaaggttttactcaggctagcttaggccttcttgcaaat
caaaggaagcgacagttgctgattggacttctgaagtcgctgagaaccataaaaacattg
caaagaactgatgtacgcttaagtgaaatgctggaggaagaggactatccaggagctatt
cagctgtgtctggaatgtcagaaggctgccagcactttcaaacactacagctgtataagt
gagctaaattcaaagctgcaggatactttggagcaaattgaggaacagctggatgtagct
ctttccaaaatctgcaagaattttgacattaatcattacaccaaggttcagcaagcttac
cggcttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcactcaagcc
attcacaacactgtatttcaagttgtgcttggctatgtggagctgtgtgcaggaaacaca
gatacaaaattccagaagcttcagtataaagatctctgtacgcacgttacaccagacagc
tatattccatgcctggcggacctgtgcaaagcactgtgggaagtcatgctcagctactac
cgaaccatggagtggcatgagaaacacgacagtgaggagacagctgcagcatctgaagga
agcaatgtgatgagcactgcagaagccacttttgaccgtggctatgtgaagaagaagtta
gaacatggcctgtcgcggatatggcaggatgttcaactcaaagtaaaaacctacttgctt
ggaactgatttatctatatttaaatatgatgatttcatctttgtcctggatattgtcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaggagtcc
attagaaaacaaagtgtcaattacttcaagaaccaccataggatacgacttgatgaactg
agaatgttcttagagaacgagacgtgggaactttgccctgttaagtcaaatttcagcatc
ttgcagcttcatgagtttaaattcctggaacagtctcgctccccatcagtctcacctagt
aagcagccatcaacaacgtcttccaaatccgtgactttgtttgagcagtactgcagtggt
gggaatccatttgaaattcaagctgaccacaaagacgaagagactgaagatgtcttagcc
tctaatgggtacgagtccgatgagcaagagaagagtgcctaccaggactacgacagcgac
agcgacgtccctgaggagctgaagcgcgactatgtggatgagcagactggcgatgtgccc
gtgaagagtgtttcacgagagacccttaagagcaggaagaaatcggattacagtctaaat
aaagtgaatgcacccatcttaacaaacacaacgttgaatgtaataaggcttgttggaaag
tacatgcagatgatgaacatccttaagccaattgccttcgatgtcatccatttcatgtct
cagctctttgattattacttgtacgccatatataccttttttggtcggaatgattcattg
gaatcaacaggacttggccttagtagtagcagactaaaaacaactctaaacagaattcaa
gaaagccttattgacctggagggctcagctgatccaactgtcactctcacagcagccgag
gaaagaaaggagaaggtacccagcccacacctcaatcagctagtgattttgacatctggg
gatacattgtatgggttggcagagagagtggtagccacagaatccttagtgttcttggct
gagcagtttgaatttcttcagccccatttggatgccgtgatgcctgcagtgaaaaagccc
ttcctgcagcagttttactcccagacagtctcaactgccagtgaacttcgcaaacccatt
tactggattgtggctggtaaagctattgattatgagcagatgcttctcctaatgaccaat
gtcaagtgggatgtcaaagagatcatgtcacagcacaacatctatgtagatgcattactg
aaggaatttgagcagtttaacaagcggttaaatgaagtttctaagagagttcggataccc
ttgcctgtatcaaatatactttgggaacattgtatacggttagctaacagaactattgtg
gaaggctatgccaatgtcaagaagtgcagtaatgagggacgtgccttgatgcaattggat
tttcaacagtttttaatgaaactcgaaaaactaactgacattagacctattcctgataaa
gagtttgtggagacgtacatcaaagcctactacctgactgagaatgacatggagcgctgg
atcaaagagcacagggaatattcaacgaagcagttgaccaacctggtgaatgtttgcctg
ggatctcacatcaataagaaagcaagacagaagctcctagcagctatagatgacatagac
aggcctaaaagatag
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