Apodemus sylvaticus (European woodmouse): 127678647
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Entry
127678647 CDS
T10613
Symbol
Nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04621
NOD-like receptor signaling pathway
asyl05132
Salmonella infection
asyl05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127678647 (Nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127678647 (Nod1)
05133 Pertussis
127678647 (Nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
asyl04054
]
127678647 (Nod1)
Pattern recognition receptors [BR:
asyl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127678647 (Nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
RsgA_GTPase
AAA_22
Sigma54_CBD
ABC_tran
PIF1
AAA_25
Motif
Other DBs
NCBI-GeneID:
127678647
NCBI-ProteinID:
XP_052029732
LinkDB
All DBs
Position
2:complement(79957566..80006408)
Genome browser
AA seq
953 aa
AA seq
DB search
MEERGHLEMEGIASGCHSHIKLLKINREHLVTNIRNTQCLVDNLLENGYFSAEDAEIVCA
CPTKPDKVRKILDLVQSKGEEVSEFFLYVLRQLEDAYVDLRLWLSEIGFSPSQLIQTKTI
VNTDPVSRYTQQLRHQLGRDSKFMLCYAQKEDLLLEEIYMDTLMELVGFNNENLGSLGGL
DCLLDHSTGVLNEHGETVFVFGDAGVGKSMLLQRLQSLWASGRLASTAKFFFHFRCRMFS
CFKESDALSLQDLLFKHFCYPEQDPEEVFSFLLRFPHTALFTFDGLDELHSDFDLSRVPD
SCCPWEPAHPLVLLANLLSGRLLKGAGKLLTARTGVEVPRQFLRKKVLLRGFSPGHLRAY
ARRMFPERTAQEHLLQQLDANPNLCSLCGVPLFCWIIFRCFQHFHTAFEGSSQLPDCAVT
LTDVFLLVTEVHLNRTQPSSLVQRNTRSPAETLRAGWRTLHALGEVAHRGTDRSLFVFDQ
EEVQASKLQEGDLQLGFLRALPDVGPEQGQQSYEFFHLTLQSFFTAFFLVADEKVSTREL
LRFFREWTSPGEATSLSCYPAFFSFRCLRGSSRLGPDPFRNKDHFQFTNLFLCGLLAKAR
QKLLQQLVPKAILRRKRKALWAHLFASLRSYLKSLPRVRSGGFNQVHAMPTFLWMLRCIY
ETQSQKVGRLAARGISADYLKLAFCNACSADCSALSFVLHHFQRQLALDLDNNNLNDYGV
QELQPCFSRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQIL
DECRGLTHLKLGKNRITGEGGKCVALAVKNSTSIIDVGMWGNQIGDEGAKAFAEALRDHP
SLTTLSLAFNGISPEGGKSLAQALMQNTRLTIIWLTKNELNDEAAECFAEMLRVNQTLKH
LWLIQNHITAKGTAQLARALQKNTTITEICLNGNLIKPEETKVFENEKRLICF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgcggccatcttgagatggaaggcatcgcctcgggttgtcactcccacatt
aaactgttgaagatcaacagggagcatctggtcaccaacattcggaacactcagtgtctg
gtggacaacctgctggagaatggctacttctcagccgaagatgcagagattgtgtgtgcc
tgtcccaccaagcctgacaaggtccgaaagattcttgacctggtgcagagcaaaggtgag
gaggtgtctgagttcttcctctacgtgctacggcagctggaggatgcttacgtggacctc
aggctgtggctatcagagatcggcttctccccttcccaactcattcagaccaaaactatc
gtcaatactgacccagtaagcaggtatacccagcagctgcgacaccaactgggccgcgac
tccaagttcatgctgtgctacgcccagaaggaggacctgctgctggaggagatctatatg
gacaccctcatggaactggtaggcttcaacaatgaaaacctgggcagcctgggaggcctg
gattgcctgctggaccacagcacgggcgtcctcaacgaacatggcgagactgtcttcgtg
ttcggggacgcgggagtaggcaagtccatgctgctgcagaggttgcagagcctctgggcg
tctggcaggttggcctcgacagctaaattcttcttccacttccgctgccgcatgttcagc
tgcttcaaggagagcgacgcgctgagtctgcaggacctgctcttcaagcatttctgctac
ccggagcaggaccccgaggaggtgttctccttcttgctgcgctttccccacacagcgctc
ttcactttcgatggcctggatgagctgcactcagacttcgacctgagccgcgtgccggac
agctgctgcccctgggagccggcgcatcctctcgtcctgctagctaacctcctaagcggg
aggctgctcaagggtgccggcaaactgctcactgctcgcacaggcgtggaggtcccccgc
cagttcctgcgcaagaaggtgctgctccggggcttctccccgggccacctgcgcgcctat
gcccgccggatgttccccgagcgcacggcgcaggagcacctgctgcagcagctggatgcc
aaccccaacctctgcagcctgtgcggggtgccgctcttctgctggatcatcttccgttgt
ttccagcacttccatacggccttcgagggctcctcacagttgccggactgtgctgtgacc
ctgactgatgtctttctgctggtcactgaggtgcatctgaacaggacgcagcccagcagc
ctggtgcagcgcaacacgcgcagcccggcggaaaccctccgtgcaggctggcgcacgctg
cacgcgctgggcgaggtggctcaccgaggcaccgacaggagcctctttgtgtttgaccag
gaggaggtgcaggcgtcgaagctgcaggaaggagatctgcagttgggcttcctgcgggct
ttgcccgacgtgggccctgagcagggccagcagtcttacgaatttttccaccttacgctc
cagagcttcttcaccgccttcttcctggtagcggatgaaaaagtgagcacccgggagctg
ctgaggttctttcgagaatggacgtctcccggggaggcaaccagcttgtcttgctatcct
gccttcttctccttccggtgcctgcgtggcagtagccgcttgggccccgatcctttcagg
aacaaagatcacttccagttcaccaacctcttcctgtgcgggctgctggccaaagcccga
cagaaactccttcagcagctggtgcccaaggctatcctaaggaggaagcgcaaggccctg
tgggctcacctgtttgccagcttgcgctcttacttgaagagcctaccccgggtccggtct
ggaggctttaaccaggtgcacgccatgccaacattcctgtggatgctgcgctgcatctat
gagacccagagccagaaggtggggcgcctagccgccaggggcatcagtgcggactacctc
aagctggccttctgcaacgcttgctctgccgactgcagcgccctatcctttgtcctgcat
catttccaaaggcagctggctctagacctggacaacaacaacctcaatgactatggagtg
caggagctgcagccttgcttcagccgcctcacggttatcagactcagtgtcaaccagatc
accgacacgggggtgaaggtgctatgtgaggaactgaccaagtacaagatcgtgacgttc
ctgggtttatacaacaaccagatcactgatatcggagccaggtatgtggcccaaatcctg
gatgaatgcagaggcctcacgcaccttaagctggggaaaaacagaataacaggtgagggc
gggaagtgtgtggccctggctgtgaagaacagcacctccatcattgatgttgggatgtgg
ggcaatcagattggagacgaaggggcaaaggccttcgcagaggcattgagggaccacccc
agcctgaccactctcagtcttgcgttcaatggcatctccccggagggagggaagagcctt
gcacaggccctgatgcagaacaccaggctgacaataatctggctgactaaaaatgaactt
aatgatgaggccgcagagtgcttcgctgagatgctgagggtcaaccagacactgaagcac
ttatggctgatccagaatcatatcacagccaaggggacagcccagctggccagggcactg
cagaagaacaccaccataacagagatttgcctcaatggaaacttaattaagccggaggaa
actaaagtctttgaaaatgagaagcggctcatctgtttctga
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