Apodemus sylvaticus (European woodmouse): 127678958
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Entry
127678958 CDS
T10613
Symbol
Xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
127678958 (Xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127678958 (Xpc)
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
127678958 (Xpc)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
127678958
NCBI-ProteinID:
XP_052030292
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Position
2:complement(122378588..122404812)
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AA seq
932 aa
AA seq
DB search
MARKRTADTRRRQRGQEAEDNKVARHEESDADDFEDEKQKPPRKCFLPKVSQGKRKRGCS
DPGDSTNGAAKKKVAKATAKSKNLKAPKEEALGDGDGRRDSPTDCKKAKKRPKREAEDHS
TDEEDSEEDWEEVEELTEPVLDLGENSATSPSDLPVNAVEIEIETPEQAKARKRSEKIKM
EFETYLRRMMKRFNKEVQENMHKVHLLCLLASSFYRNNICRQPDLLAIGLSIIPVRFTKV
PLQDRDVYYLSNLVKWFIGTFTVNADLSASEQDSLQTTLERRIAIYSARDNEELVHIFLL
ILRALQLLTRLVLSLQPIPLKSAVTKGRRSSKETSLEGPGGSSEPSSNIPESHRKPKTSK
RIKQEEALSGGSGKATARGKRGSGGSRQQRKPSCSEGEEAGQEIQGRPHPHARKRRTAAK
VSYKEESESDGAGSGSDFELSSGEDQHSSDEDCEPGPRKQKRTSAPQRTKAGSKRASETQ
RGSRCEAPSVPAASSSSSGCKRGKKVSSGGEETEDRKAAGVDQWLEVFCEPQAKWVCVDC
VHGVVGQPVACYKYATKPMTYVVGIDSDGWVRDVTQRYDPAWMTATRKCRVDTEWWAETL
RPYRSPLMEREKKEDQEFQAKHLDQPLPTSISTYKNHPLYALKRHLLKFQAIYPETAAVL
GYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGFSNRARKARLSEPQLHDY
NDLALYGHWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQMNLPNLHRVARKLG
IDCVQAITGFDFHGGYCHPVTDGYVVCEEFKDVLLAAWENEQALIEKKEKEKKEKRALGN
WKLLVRGLLIREKLKLRYGAKSETAAPHANAGGGLSSDEEEGTSSQAEAARVLAASWPQN
REATEEQKPEYRKMTRRRRAAEASHLFPFEKL
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaagcgcaccgcagacacaaggcggcggcagcgcggtcaggaagccgaggac
aacaaagtagcccggcacgaggagagcgatgcggatgactttgaagatgagaaacagaaa
cccccaaggaagtgctttctcccgaaagtttctcaaggaaagaggaagagaggctgcagt
gatccaggggactccacaaatggtgcagcaaaaaagaaagtggccaaagccactgctaaa
tccaagaatctcaaggctccaaaggaggaagccctcggcgatggggacggtcgcagggac
tcacctactgactgcaagaaggcaaagaaacgtccaaaaagagaggcggaggaccacagc
actgacgaagaagacagcgaggaggactgggaggaggtggaagagcttactgagcctgtc
ctggacttgggagaaaactctgccacctcaccgtctgacctgcctgtgaacgcagtggag
atagaaattgaaacaccagagcaggcgaaggcacggaaaagaagtgagaagataaagatg
gagtttgagacatacctgcggaggatgatgaagcgtttcaataaagaagtgcaggagaac
atgcacaaggttcacttgctctgcctgctggccagtagcttctatcgaaacaacatctgc
cgacagccagatctgctggccattggcctctccatcatcccagttcgctttaccaaggtg
ccacttcaagacagggatgtctactacctttcaaacctggtaaagtggttcatcggaacc
ttcactgtcaatgccgacctttcagccagtgagcaggacagcctgcagacgaccttggaa
aggaggattgctatttactctgcaagggataatgaagagttggtccacatatttctcctg
attcttcgggctctgcagctgctcacccggctggtcctgtctctgcagcccattccactg
aagtcagctgtgacaaaggggaggagatcttccaaagaaacatctttagagggtcctgga
ggctcttcagaaccttctagtaacattccagaaagccaccgcaaacccaagaccagcaag
agaatcaaacaagaagaagccttgtctgggggcagtggcaaggccactgccagagggaag
agaggcagtgggggcagcaggcagcagaggaagccctcctgcagcgagggagaggaggcc
gggcaggaaatccagggccgtccacatccacatgcccggaagcggcgtacggctgccaag
gtgtcttacaaagaggagagtgagagtgatggggcaggcagtggctctgactttgaactg
tccagcggggaggaccagcattcctctgatgaagattgtgagcctggccctcgcaagcag
aagaggacctcagctcctcagaggacaaaggctgggtctaagcgtgcttccgagacccag
cgtggaagccggtgtgaggcaccaagtgttccagcggcatcttcaagctcctcaggctgt
aagagaggcaagaaggtctccagtggtggtgaagagacggaagataggaaagctgctggt
gtagaccagtggctggaggtgttctgtgagccacaggcgaagtgggtgtgtgtggactgc
gtgcatggtgtggtgggccagcctgtggcctgttacaaatatgccaccaaacccatgacc
tatgttgtaggcattgacagtgatggctgggtccgagatgtcactcagaggtatgaccca
gcctggatgacagcaacccgcaagtgccgggttgacactgagtggtgggctgagaccttg
agaccctatcggagcccacttatggagagggagaagaaggaagaccaggagtttcaggca
aagcacctggaccaacctttgcccacctccatcagcacatataagaaccaccctctgtat
gccctgaagcgccacctcttgaaattccaggctatctaccctgagacagctgcggtcctt
gggtattgtcgtggagaagctgtctattccagggactgtgtgcataccttacactccagg
gacacgtggctgaagcaagcaagagtggtgcggcttggagaagtgccctacaagatggtg
aaaggcttctccaatcgtgcccggaaagcccggctttcagagccccagctgcatgactac
aatgacttggccctctatggtcactggcagacagaggagtatcagcctcctgtagctgta
gatgggaaggtgcctcggaatgagtttgggaacgtgtatctcttcctgcccagcatgatg
cctgtcggctgtgtccagatgaacctgcccaacctgcaccgtgtggcccgcaagctgggc
atcgactgtgtgcaggccatcactggcttcgatttccacggaggctattgccatccagta
actgatggctacgttgtctgtgaggaattcaaagatgtgctgctggctgcttgggagaat
gaacaggccctcattgaaaagaaggagaaggagaaaaaggaaaagcgggcactggggaac
tggaagctgctggtcagaggactgctcatcagagagaagctgaaactccgctacggggcc
aagagcgagacagcagctccccatgcaaatgcaggaggcggactctcttctgatgaagag
gaagggaccagttcacaagcagaagcagccagagtcctggctgcctcctggccacagaac
cgagaggcaacagaagaacagaagccggagtacaggaagatgactcggaggaggcgggcg
gcagaggcttcccacctcttcccgtttgagaagctgtga
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