Apodemus sylvaticus (European woodmouse): 127679079
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Entry
127679079 CDS
T10613
Symbol
Mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127679079 (Mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asyl03036
]
127679079 (Mbd4)
03400 DNA repair and recombination proteins [BR:
asyl03400
]
127679079 (Mbd4)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
127679079 (Mbd4)
DNA repair and recombination proteins [BR:
asyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127679079 (Mbd4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
127679079
NCBI-ProteinID:
XP_052030573
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All DBs
Position
2:complement(147465873..147478259)
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AA seq
561 aa
AA seq
DB search
MESPNLGDNEVPSVTAGEILVPDPPWDRCKEDVAVGLEGVREDGKDLVVSRESSSLLQNT
ASPQSGGTAATDCQKPVPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLL
KNGETFLKPEDFDFTVLAKRSISPGYKHQSLAALTSPQPNETDISKQNLRTRSKRNTDVL
PLPSGNSESPDSSRLSDSNSAHLLLEEREDTQDADSGERRKPKRKVTVLKGIASQKTKQR
CRKSLLDSTRRNRKRGSVVQKVGAESELVPQEIQLNRTLCPADSCARQLVSRAGEGKGLA
QGKSPSPESDLCFIGVTPGTTNKLPSTEAAGEARPEQTSEAIRAKGDKEGEAHLHIDGLQ
DGSEMPSCSQAEKPFTSETFQEDSIPRTQVEKRKTSLYFSSKYNKEALSPPRRKAFKKWT
PPRSPFNLVQEILFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEAARAADWRDV
SELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYRIFCVNEWKQVHPE
DHKLNKYHDWLWENHEKLSLS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggagagcccaaaccttggggacaacgaagtcccctctgtcaccgctggagagatccta
gttccagacccgccttgggatcgctgcaaggaggatgttgctgttggactggagggagtg
agagaagatggaaaggacctggtggtcagcagggagagcagctcccttctccagaacact
gcttctcctcagtctggtggtactgcagcgacagactgccaaaagcctgtcccgtgtgga
tgggaaagagttgtgaagcaaaggttatctgggaaaactgcaggaaaatttgatgtatat
tttatcagcccacaaggattgaagttcagatcaaaacgttcacttgctaattatcttctc
aaaaatggagagacttttcttaagcctgaagattttgattttactgtgcttgctaaaagg
agcatcagtccaggttataaacaccaaagtttggcagctctgacttccccgcagccaaat
gaaactgacatttcaaagcagaacctgaggacacgaagcaagaggaacacagatgtgttg
cctctgcccagtggtaattcagagtcgccagatagcagcagactttctgactctaactct
gctcacttgctattggaagaacgtgaggacactcaggatgctgactccggggagaggaga
aagcccaaaagaaaggtgactgttttgaaaggaattgcaagtcagaaaaccaaacaaagg
tgcaggaagagtctcttagattctactcgaagaaacagaaaaagaggatctgtggttcag
aaagtgggtgctgagagcgagctagttccacaggaaattcaactcaacagaaccctctgc
cctgcagacagctgtgcaaggcagctggtcagccgggctggggaaggaaagggcctggca
caaggaaaatcgccaagcccggagtcggatctttgtttcataggagtaactcctggcacc
acaaacaaattaccttcaactgaagcagcaggtgaagcaaggcctgagcagacatcagag
gcgatcagagcgaagggagacaaagagggggaggcacatttgcatattgacggtttacag
gatggctctgaaatgcccagctgctcacaagccgagaaaccctttacttctgagacattt
caagaagacagcatcccacgaacccaagtagaaaaaaggaaaacaagcctgtatttttcc
agcaagtacaacaaagaagctcttagccccccaagacgcaaagccttcaagaaatggact
cctcctcggtcaccttttaatcttgttcaagaaatacttttccatgatccatggaaactc
ctcatcgcaactatatttctcaatcgaacctcaggcaagatggccatccctgtgctgtgg
gagtttctagagaagtacccttcggctgaggcggcccgagctgctgactggagggacgtg
tcggagctacttaagcctctcggtctctatgatctccgtgcaaaaaccattatcaagttc
tcagatgaatatctgacaaagcagtggaggtatccgattgagcttcatgggatcggtaaa
tatggcaacgactcgtaccggatcttttgtgtcaatgaatggaagcaggtgcaccctgaa
gaccacaagttaaataaataccatgactggctttgggaaaatcatgaaaaattaagtcta
tcttaa
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