Apodemus sylvaticus (European woodmouse): 127679244
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Entry
127679244 CDS
T10613
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127679244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asyl02000
]
127679244
Transporters [BR:
asyl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127679244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
ABC2_membrane
AAA_30
RsgA_GTPase
AAA_6
SRP54
AAA_15
Arf
DUF2110
Motif
Other DBs
NCBI-GeneID:
127679244
NCBI-ProteinID:
XP_052030907
LinkDB
All DBs
Position
1:complement(85329312..85492490)
Genome browser
AA seq
1678 aa
AA seq
DB search
MDPLIVNQLTVLLWKNFTLKKRHIISTVTEVLAALLFVIMLLIFRAITDMNVVGPYNFTP
QPIATMPSFVKDAQEWELIYIPSDIDVVTEIIEDVKRNLNTTIKVRGFSSEVEFEEYILF
DYMSQKVLAAIVFDCGFKNKTDPLPLQVKYHLRFVGAQRTIWWPDKIGWKTRLLFPNHPS
IQPRNPNFLDGGSPGYIKEGFLAVQHALDKSIMMHHESSAGKKLFDEIDTLIQRFPYPSH
SQDKLLWISSPFIPLMFILMFSSIVLSIMRSIVFEKEKRLKEYQLMMGLRNWIIWIGYFF
TFFPLYVIIIFLICILLFIVEEPILRYSDCSFIFVFLTCYAIASICFAFMVSTFFSKTRL
AASAGNLLFFASFFPYNFISEYYGMLDLNTKITACLSANIALAMGINSLIKLEIQEIGVK
WHNLWTPANLEDNLNFGYMVGMLLFDAFLYSLVTWYVEAVFPGQCAVPQPWYFFLMRSYW
FGKPKIRKTTEDTKCFPIVHNCYEAEPTNLEAKIQIKHLHKEFKNKPAINNLSLNIYEGQ
VTVLLGHNGAGKTTTLSVLTGVYSSASRVKAYINGYNISDNMIEIRKDLGFCPQYDLLFD
DLTLSEHLFFYCMVKGIPQNINCVELNHMLSAFNLQENYHTLSGSVSGGVRRKLSIVLAL
MGGSKVVILDEPSSGLDPVSRRATWDILQNYKHNRTILLTTHYMDEADILGDRIAIMVRG
TLHCCGSSVFLKQIYGAGYHIVMEKEQYCEVDNIIAMIQQHIPGAMLENDIGNELSFILP
KKYVSRFETLFTELEMRQKALGIASFGASITTMEEVFLKVNKLAAPQKNIQNVQPYYLSY
RKMRQDEQQNVNMPRNYNKPNFPYLSEIATVKFNTGVTLYRQQFYSMFIKRALFISRNWK
LMLLQIIVVLIVTTYLLLALHLDDNDIPERELNLSHYGRTIVPYSISGNSDLTLNLTKNL
NIFLKSKNQSLRKIKGDMNDYILENKDCRIFCIIALSFKVERNKTVLTVFFNNEAYHSPA
ISLSILDNILFMLLSGPGASITAFNKPQPLPHYGSNTVPVNGLQIVQCLAFGISVVVGSF
SVQTVTERINQAKHIQFLTGVWVHTYWLSALLCDLIFFFITCCVLLGIFRFCQLEAFVVH
YNFLDTILIFMLYGWCVVPLIYLGSFLFKSSTAAYIKITLFNYFSTMFSIIIYTIVQFYG
NDFPNFVHILIRTILMILPSYNLAMSISKYFDDYEVKRLCAREFRSIYMDCSDTYTQNNV
YGFGELGIGKFLITLATMGLVFLLLLITLESVSCNLKSFVFRKIIFYFYNKFIRGRHTVV
SKQRTKEDEDEDMRREKRKVFTVLLRLQSAPLVLNEVTKIYFKYPVVKAVKNISLVVKKS
ECFGLLGLNGAGKTTTFKMLTGEETITSGIAFIDGNSITKNQRKIRSRIGYCPQSESVLN
HMTGRESLVMYARLWGVPEHDINEYVEAFLHSVHLEPIADQFIHTYSAGSKRRLSTAIAL
MGKSSVVLLDEPSTGMDPVAQHLLWNTVTLICKTGKAIIITSHRMEECEALCSRLAIMVK
GKLTCLGTPQHVRKRFGHVYTLTVKINIAKDEDKVEEFKNFIKVTFPGNIKYQEFHGTIG
YYIPSKEICWGKVFEILEKAKVLFKLEDYSVKQVTLEQIFLTFANTDEMRTYQEIKLQ
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggatccgttgatagtcaatcaattaacagttctcctctggaaaaattttacattaaag
aagaggcatatcattagtacagtaacagaagtcttggcagcattgttgtttgtaataatg
ttgttgatattccgtgcaattactgatatgaatgttgttggaccgtataatttcactcct
caacccattgctaccatgccttctttcgtcaaagatgcccaagagtgggaattgatttac
ataccttctgatattgatgtggtaacagaaatcattgaggatgtaaagaggaatctcaac
accactataaaagtccgaggtttttcttcagaagttgagtttgaggagtacattctgttt
gattatatgtctcagaaagtactggctgccattgtttttgactgcggcttcaaaaataaa
actgatcctctgccacttcaggtaaaatatcacttgcgttttgttggtgcacagaggacc
atctggtggccagacaagataggctggaaaacgagacttctttttcctaatcatccatct
atacagcctaggaatccaaattttcttgatggaggaagtcctgggtatatcaaggaagga
ttcctggcagtgcagcatgccttggacaagagcatcatgatgcatcatgaaagcagtgct
gggaaaaagctgtttgatgaaattgacactctgatacagaggtttccatacccaagtcat
tctcaggataaactactttggatctccagtcctttcatcccgttaatgttcatactcatg
ttctcttccattgtcctttccatcatgcgatccattgtgtttgaaaaggagaaaagatta
aaggagtaccagctcatgatggggcttagaaattggatcatctggattggttatttcttc
acgttcttccctttatatgtcatcattatctttctgatatgtatattactctttattgta
gaggagccaatcttacgctacagtgactgtagtttcatctttgtctttcttacatgttat
gccatcgcatccatatgctttgcctttatggttagcacgttcttcagtaaaactcgttta
gctgcttctgctggaaacctcctattttttgccagtttctttccctataacttcatctct
gaatactatggaatgttggaccttaataccaagataaccgcctgtctgagtgcaaatatt
gctttggccatggggattaatagtttaatcaagttggaaatacaagagattggtgttaaa
tggcacaacctttggacaccagccaatcttgaggataacctcaactttggctatatggtt
ggaatgcttctgtttgatgctttcttatacagccttgttacctggtatgtagaagctgtc
tttcctgggcagtgtgctgtgcctcaaccatggtactttttccttatgcgctcatattgg
tttggcaaaccaaaaattagaaagactacagaagacacaaagtgcttccccatagtacat
aactgttacgaggctgaacctaccaacctggaggcaaaaatccagatcaagcatctgcac
aaggaatttaaaaacaaacctgcaataaacaacttgtcactgaacatttatgaggggcag
gtcactgtccttctgggacacaatggggcaggaaagaccacaaccttgtctgttctcaca
ggtgtgtattcatctgcatccagggtaaaggcctatattaatggatataatatttcagat
aacatgattgaaattagaaaagacttgggcttctgccctcaatatgacctattgtttgat
gatttgacactctcagaacacctttttttctactgtatggtaaaaggaatacctcaaaac
ataaactgtgtggaacttaaccatatgctgtctgcttttaacctgcaagaaaactaccat
acattatcaggctcagtgagtggaggagtgaggcgcaaactctccatcgttttagcactt
atggggggctccaaggtagtgatacttgatgaaccatcatctggcctggacccagtgtca
agaagggccacctgggatatccttcagaattataaacacaatcggaccattttactaact
acccactacatggatgaagctgacatcctgggtgaccgcattgccatcatggtcaggggg
accttgcactgctgtggctcttcagtattcctgaaacaaatatatggtgctggatatcac
atagtcatggagaaggaacagtattgtgaggttgataatatcattgcaatgattcagcag
catattccaggtgctatgttggaaaatgatataggaaatgaattatcatttatcctaccc
aaaaagtatgtatcaagatttgaaactttgtttacagagttggaaatgagacaaaaagca
ctaggcattgccagctttggagcttcaatcactacaatggaagaggtgttccttaaggtc
aataagctggcagctcctcaaaagaatattcagaatgtccaaccctattacttgtcatac
agaaagatgagacaagatgagcagcagaatgtgaatatgcccagaaattataacaaacca
aattttccctatttgagtgaaattgctactgttaaatttaacactggggttacactttac
cgccagcaattttattccatgtttataaaaagagcactattcattagccgcaactggaag
ttgatgttgctacagataatagtagttttgattgtcactacatatctcttattagctctg
catttagatgataatgatatacctgaaagggaactgaatttgagtcattatggtagaacc
attgtaccttactcaatttcagggaattctgatttgactctgaatctcacaaaaaacctg
aatatttttctaaaatcaaagaatcaaagcttaagaaaaataaaaggtgatatgaatgat
tacatattagaaaataaagattgtcgtatcttctgcattattgcactttcttttaaagtt
gagagaaacaaaacagtgctcactgttttcttcaataatgaagcttaccactcacctgca
atatctctatcaatattagacaacattctttttatgttactttctggccctggtgcttcc
attactgccttcaataagcctcaacctctccctcattatggttcgaacacagtacctgta
aatggattgcaaatagtacagtgtttagcttttggcatttctgtggtggtcgggtccttt
agtgtccagactgtgactgaaagaatcaatcaagccaagcacatccagtttctgactggg
gtctgggtgcacacttactggctctctgcgttgttgtgtgacctcatcttctttttcatt
acctgctgtgtactactgggcatattcagattctgccagctggaggcatttgttgtgcat
tataacttcctggacacgattctgattttcatgctttatggctggtgtgttgttcctctc
atttatcttggaagctttctgttcaaaagtagcactgctgcctacatcaaaatcacactc
tttaactacttttcaactatgttcagtatcatcatttacaccattgtgcaattttatggt
aatgactttcctaactttgtccacatcctcataaggacaattttaatgatactgcctagt
tacaatcttgcaatgagtatcagcaagtattttgatgactatgaggtaaaaaggctgtgt
gctagggaattcagaagtatttacatggattgcagtgacacatacactcagaacaacgtg
tatggctttggagagcttgggattgggaagtttctgatcacactggctaccatgggcttg
gtttttctcctcttgcttataaccctggaatctgtttcctgtaatctgaagagctttgtc
tttcgaaaaattatcttttatttctacaataagttcataagaggcaggcatactgtagta
tctaagcaaagaaccaaagaggatgaggatgaagacatgaggagagaaaaaagaaaagtc
tttacagtgctgctcaggttacagagcgccccgttggtccttaatgaagttacaaagatt
tattttaagtatcctgttgtcaaggctgtgaaaaatatctcccttgtagtcaagaagtca
gagtgctttggattgcttggattaaatggagctggaaaaactactacattcaaaatgctg
accggagaagagactatcacctccggaattgcgtttattgatggcaatagtatcactaaa
aaccaaagaaagattaggtcaagaattggttactgtcctcagtctgaatctgtgctgaac
cacatgacaggccgggaatcgttggtcatgtacgctaggttgtggggggtcccagagcat
gacattaatgagtatgtggaagcctttctgcattcagtacacctggaacccattgctgac
cagttcatccacacgtacagtgctggaagcaaacgtaggctaagcactgctatcgcccta
atgggaaagtcttcagttgtcttactggatgaaccatctactggcatggacccagtagct
cagcatctgctctggaacacagttaccttgatctgtaagacgggtaaagctatcatcata
acttcccacagaatggaagaatgtgaggccctctgttctaggctggctatcatggtgaaa
gggaagcttacatgtctaggcaccccccagcacgtcagaaagcggtttggtcatgtatac
actctaacagtaaagatcaatattgctaaggatgaagataaagtagaagagttcaaaaat
ttcattaaagtaactttcccaggtaacatcaaataccaggaatttcatgggactattggc
tactatattccaagcaaggaaatctgctggggaaaggtatttgaaattttggagaaagct
aaagtgctgttcaagttagaagactattctgtcaaacaagtaaccctggaacaaatattt
ctgaccttcgctaatactgatgaaatgagaacttatcaggaaataaagctgcagtaa
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integrated database retrieval system
