Apodemus sylvaticus (European woodmouse): 127679259
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Entry
127679259 CDS
T10613
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127679259
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asyl02000
]
127679259
Transporters [BR:
asyl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127679259
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SRP54
AAA_23
AAA_22
RsgA_GTPase
AAA_15
MS_TIM-barrel
Motif
Other DBs
NCBI-GeneID:
127679259
NCBI-ProteinID:
XP_052030939
LinkDB
All DBs
Position
1:complement(85600261..85715642)
Genome browser
AA seq
1682 aa
AA seq
DB search
MDSLQMRQFSVLLWKNFLLKSRNVVGLVVEIVLIFLLFVWTLTVRRISKKTFIHAVFFNP
ILLTLPDFLNENFEYELAYVPSESNAARNITEMVKKDLNFNFKVQGFPSEESFERYIKYE
NKREIVLAAIVFDHKFKTSNERLPLQVKYTLRFGHLYDPENVLKPSKYREDTEWNTSSLF
PSVPSLGPRNLLESDGGDPGYITEGFLIMQHSVDKAIMMYHSGRKAEAMFANTEIYARRF
PYPAFIHDSFLWTFIEMFPWTILFTFTQMSLVIVGTIMLEKEKRLKEYQLMVGLSNAMLW
VSYFITFLLMYFIIICLLCGILFFKITHERVFQYSDPFFITFYFLCFAVSSVLLGFMIST
LFNKASLATSIAGFIHFLTFFPYLILLHVYDRTNLRGKLALCLITNTALAFGSDLICKLE
MKGHGAQWHNFATKVNPDDDLTLAHIIGMFLLSGFLYGLVAWYVDAVFPGKYGVPKPWNF
FLQKTYWFGEPALSREESQVSDSFPSDYMEPEPVGLVAGIRIQHLYKEFILKNSTVMAVK
DLSLNLYEGQITVLLGHNGAGKTTTLSILTGFYLPTRGKIYISGYDISSDMVQVRKSLGL
CPQDDLLFPMLTVSEHLHFYCVIKGIPSSKRPREIHRMLTSFGLLQKSNTMSKDLSGGMK
RMLSIIIALIGDTKVVILDEPTSGMDPVSRRATWDLLQLYKKDRTILLTTHHMDEADVLG
DRIAIMVMGILKCCGSSLFLKKLYGVGYHLVIVKTPDSDDEKISQLIKDYIPTAKMEANV
AAELSFILPKEHTHRFAELFTDLEERQEELGISGFGVSMTTMDEVFFKVSNLEDLKLNTE
ISQSSSTVNESQNEDNQNMNVPRNFERASYSRRHFGSSFNAGCSLYMQQFRAMFIKRVMF
SWRNWKLLLLQLLALLGLMYLLMKGISFSAPEQPARVMDLEQYGETTIPFSVSGDPHLTR
ILTKNLEIMFNSKKQKIHEVQGDMQDYLLENKDCIYSCIVAFSLDVTAKEKIFTFWFNNE
AYHSSPLSLSILDNIIFKYLSGPNATITVSNKPQPQRVTKGKSDERSTSGIQIVFNLLFG
MSIFTSGFCLMAVTERVSKAKHIQFVSGVYTMNFWLSALLWDLIIYFVACVLLLIVFLYS
NVDILLEKYHFLDTMFILMLFGWSVIPFIYLLSFWYNNSTNAYIKIFVFNHCLGFMSIIV
DAVVQIIPDIKTSTKNHILNAMLLLPIYNFGMSIYKYYNIQELRKLCSSLVSNTFLGCKT
KLSDIPIYSMDQKAIGRHVTAMAATGLIYFLLIILLETTSWNIKAFLHRCVLFGIYRIFY
RARMSEELSGDSEEEDVQNERETILNHSWRSLNSTVLIKELIKVYFKIPPTLAVRNISVT
IQKEECFGLLGLNGAGKTTTFKIMTGEEIATSGDVFIEGYSVTRNILKVRSKIGYCPQFD
ALLDYMTSQEILTMYARVWGIPEKNIRRYVDNLLEMLYLKPQAEKFIYTLSGGNKRRLST
AIAIMGNSSVVFLDEPSTGMDPLARRMLWNTVIKTRESGKVIILTSHSMEECEALCTRLA
IMVQGKLVCLGSPQHLKNKFGNVYTMTIKFKSDTDDDAIQDLKDFIAEVFPGSDLKQENQ
GVLNYYIPSKDNSWGKVFGILEKAKEDYNLEDYSINQISLEQVFLTFTNPDNTESGYGKA
VP
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggattcactgcagatgaggcaattttcagtcctcctgtggaaaaatttccttttaaag
agccggaatgtggttggcttagtggtggagattgtcttgatatttctgctgtttgtatgg
actttgaccgtgcgcagaatttcaaagaagacatttattcatgctgtgtttttcaatcct
attctcttgacattacctgacttccttaatgaaaactttgaatatgaattggcttatgtg
ccttctgagagtaatgcagcaagaaatattactgagatggtaaaaaaggatttaaatttc
aactttaaagttcaaggctttccgtcagaagaatcttttgagagatacattaaatatgag
aacaagcgtgagattgtgctggctgctattgtgtttgatcacaagttcaaaaccagcaat
gaacgcttgccacttcaggtaaaatatactttgcgctttggtcatctctatgatcctgaa
aatgtgttaaagccatctaagtaccgggaagatacagagtggaatacatcgtctctcttc
ccatctgtgccttctctagggccccggaacctcttggaaagcgacgggggagaccctgga
tacatcacagaaggatttcttatcatgcagcattctgtagacaaggccatcatgatgtat
cacagtggcagaaaagctgaagccatgtttgctaacaccgaaatttatgcgaggagattc
ccatacccggccttcattcacgacagtttcttgtggactttcattgaaatgttcccttgg
acaattttatttacatttactcaaatgtcacttgtcatagttgggaccattatgttggaa
aaggaaaagagattaaaggaataccagctcatggtgggactcagtaatgctatgctctgg
gtttcctatttcatcaccttcttattgatgtatttcatcatcatctgtttgctgtgtggg
attctgttcttcaagattacacatgagcgagtcttccaatacagtgacccattcttcatc
accttctatttcctgtgctttgctgtctcctcagtgctgcttggcttcatgattagcaca
ttatttaataaagcttctctggccacttctattgcagggttcatccatttcctcaccttc
tttccatatttgatcttacttcatgtgtatgatcggacaaacctcagagggaagctggct
ctctgtctcattaccaataccgcactcgcatttgggtctgacttgatatgcaagctggaa
atgaaggggcatggtgctcaatggcacaacttcgctacaaaagtaaaccctgatgatgac
ctaaccttggcccacataataggaatgtttttattaagtggttttctctatggccttgtg
gcctggtacgtagatgctgtctttccagggaagtatggtgtgcccaagccctggaacttt
ttcctgcagaaaacctactggtttggagagccagccttaagcagggaagaaagccaagtc
tctgattcatttccaagtgactatatggagcctgaacctgttggcttagtggctggcatc
cggattcagcatttgtacaaggaattcatcttaaaaaacagtaccgtgatggcagtaaaa
gacttgtctttgaacttgtatgaggggcagataactgttcttcttggacataacggtgca
ggaaaaaccaccaccttgtccattctcacaggtttctatcttcctaccagaggaaagatc
tatattagtggatatgacatctcatctgacatggttcaagttaggaaaagcttgggcttg
tgtccccaggacgacctgttgttcccgatgctgacagtgtcagaacaccttcatttctac
tgcgtgatcaaaggaataccttcgtctaagcgaccaagagaaattcacagaatgctcacc
tcttttggcctgctgcagaaaagtaataccatgtcaaaggatctgagtggaggaatgaaa
cgaatgctctcaatcattatagctctaataggggacactaaggtggtgatacttgatgag
ccaacatctggcatggatccagtctcaagaagggccacctgggacctgcttcagctttat
aaaaaggaccgcaccatcttactgaccacacaccatatggatgaggcggatgtgctgggg
gaccggattgccatcatggtcatggggatactgaagtgctgtggctcttcacttttcctg
aagaaactctatggtgtggggtatcacctagtcatagtgaagactcctgacagtgatgat
gaaaaaatctcccagctgattaaggattacataccaactgccaagatggaggccaatgtt
gcagctgagctgtcatttatcctgcccaaggagcacacacacaggtttgcagaacttttt
acagacctagaagaaagacaagaagagctgggaatctccggctttggtgtctccatgact
accatggacgaggttttcttcaaggtcagtaatctggaagatttgaagttgaacaccgag
atttctcagtcatcttccacagtgaacgaaagccaaaatgaagacaaccagaacatgaat
gtgcccagaaattttgagcgagcaagttactcaagaagacattttggttcttcattcaat
gccgggtgttctctttacatgcagcagttccgagccatgttcatcaaaagggtgatgttc
tcttggcgcaactggaaactgctgctgttgcagctgctggcacttctgggtctcatgtat
cttctgatgaaaggaataagcttctccgcacctgagcagcctgccagggtgatggacttg
gagcagtatggcgagaccactatccctttctcagtttctggagatcctcatttgacccga
attctcaccaaaaatcttgagatcatgttcaactctaaaaaacaaaaaattcatgaagtg
caaggtgatatgcaggactacttgctggaaaataaagactgcatttactcgtgtatcgtt
gccttttcccttgatgttactgcaaaagaaaagatatttaccttttggtttaacaatgag
gcataccattcatcaccattatctttatcgatattagacaacattatttttaaatatctc
tctggccctaatgccaccattactgtctccaacaagcctcagcctcaacgtgtcaccaaa
ggcaaatctgatgaaagaagcacctcaggaatccagatagtctttaatttgctttttggg
atgagtattttcaccagtggcttctgccttatggcagtgactgagagagttagtaaagca
aagcacatccaatttgtgagcggtgtctacaccatgaatttttggctctctgctttgctg
tgggatctcatcatctacttcgttgcctgcgtcctgctgctgatagtgttcctatactcc
aatgtggatatactgttggagaaataccacttcctggacacaatgttcatcctcatgttg
tttggatggtctgtcatccccttcatctacctgctaagcttctggtacaacaatagcacc
aatgcctacatcaagatcttcgtcttcaaccactgtttagggtttatgagtataattgtg
gatgctgtggtacaaatcataccagatattaaaaccagtactaagaaccacatacttaac
gccatgctgctgttacccatttataactttgggatgagtatctacaaatactataacatc
caggaattaaggaaattatgttcttctttggtatctaatacctttctgggttgcaaaact
aaacttagtgacattcctatatacagtatggatcaaaaagcaattggaaggcatgtgact
gccatggctgccacagggctgatatacttcctcctcattatccttctggagactacttca
tggaatataaaggccttcctacatcgatgtgttttatttggtatctacaggatattttat
agggctagaatgtctgaggagctctctggagactctgaagaggaagatgtacaaaatgaa
agagagactatcctgaaccattcttggcgctcactgaattctactgtgctcattaaagag
ctcataaaggtctattttaaaattccacccactctggctgtgagaaatatctctgtcacc
attcaaaaggaggagtgctttggtttgcttgggttaaatggagctgggaaaactactacc
tttaaaattatgactggagaagagatagctacctctggggatgtgttcattgaaggctac
agtgtcaccagaaatatcctaaaggtaaggtcaaaaattggctattgcccacagtttgat
gccttgctggattacatgacctctcaggagatattgacaatgtacgccagggtgtgggga
attccagagaagaatattaggcgctatgtggacaacttgttggaaatgttgtatctgaaa
ccacaggctgagaagtttatttacactttgagtggaggaaacaaacgtaggctgagcacc
gcgatcgccataatgggaaactcttcagttgtcttcctggatgagccatccactggcatg
gacccactagcccggcgcatgctctggaacacagtgataaagactcgggagagtggcaag
gtcatcatcctaacctctcacagcatggaggagtgtgaagctctctgtactaggctagcc
atcatggtgcaggggaagttggtgtgtctgggtagccctcagcatctcaagaacaaattt
ggcaatgtttacaccatgaccatcaagttcaaaagtgacactgatgacgatgcgatacag
gatttaaaagattttattgccgaggttttcccaggcagtgacttaaagcaagagaatcaa
ggagtccttaattactacattcccagcaaggacaacagctggggaaaggtgttcggcatt
ctggagaaagcaaaggaggactacaacttagaagactattccatcaatcagatcagcctg
gagcaagtcttcctgacctttaccaatccagataacacagagagtggttatgggaaagca
gtgccttga
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integrated database retrieval system
