Apodemus sylvaticus (European woodmouse): 127680202
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Entry
127680202 CDS
T10613
Symbol
Chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asyl03036
]
127680202 (Chd5)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127680202 (Chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
127680202
NCBI-ProteinID:
XP_052031727
LinkDB
All DBs
Position
3:167602961..167652879
Genome browser
AA seq
1940 aa
AA seq
DB search
MRGPLGTEEELPRLFAEEMENEEEMSEEEDGGLEGFEDFFPAEPVSLPKKKTKRLKESKS
KGKRKKKEGSNDELSNEEDLEGRSESEGSNYSPTKKKKKKLKEKKEKKAKRKKRDEDEED
NDDGGLKEPKSSGQLMAEWGLDDVDYLFSEDDYHTLTNYKAFSQFLRPLIAKKNPKIPMS
KMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQVPQPLPIRKA
KTKEGKGPGVRKKNKGAKDSKKKGRSKRVAGLKFRFGGISKRKKGSSSEEDEREDSDLDN
ASIHSSSVRSECSAALGKKNKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPR
AYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDEEEEEGGCEEEEDDHMEFCRVCK
DGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAP
FVVGLPGPEVEPGMPPPRPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQ
RKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFD
KKGDVHYLIKWKDLPYDQCTWEVDEIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLVKKG
KKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTIL
ADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGD
KESRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWAC
LVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEG
FLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI
LTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSS
GKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAI
DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV
MIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD
DVEGMMSQGQRPSTPIPDMQSTKGSLAAGAKKKHGSTPPGDNKDVEDSSVIHYDDAAISK
LLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDYWEKLL
RHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFE
ERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQ
DAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRI
GVMSLVRKKVQEFEHVNGKYSTPDLVPEGPEGKKPGDIISSDPNTPVPASPAQLPPAPLG
LPDKTEAQLGYTDEKESGMQKPKKSLEIQALPTALDRVEGEDKHQSSDSKDRAREERLEE
VEKTQGSPEQPLKEEVLVDKEPIPDKLALSLSHSGDFRPDDPKAEEKEPMETQQNGDREE
DEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYEIWHRRHDYWLLAGI
VTHGYARWQDIQNDPRYIILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRR
AAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELL
SDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQTSSRPRDFPLFQRS
FPAEPSHLPNPHGREKLQPL
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggaggagatggag
aacgaggaggagatgtcagaagaagaagacggtggccttgaaggctttgaggacttcttt
cctgcagagcccgtgagccttcccaagaagaagacgaagaggctgaaagagagcaagtcc
aaagggaaaaggaagaagaaagaggggagcaatgatgagctgtccaacgaggaggatctg
gaagggaggtcagagagtgagggcagcaactattcccccaccaagaagaagaagaagaaa
ctgaaggagaagaaggagaagaaggccaagcggaaaaagagagatgaggatgaagaagat
aacgatgacggaggcttgaaggagcctaagtcctcaggacagctcatggctgagtggggt
ctcgacgatgtggactacctgttttctgaggatgactaccacacactgaccaactacaaa
gccttcagccagttcctccggccgcttattgccaagaagaacccgaagatccccatgtcc
aaaatgatgactgtcctgggggccaagtggcgggaattcagcgccaacaacccgtttaag
ggaagctcggcagcagcagctgcggctgctgtggccgcggccgtggagacggtgaccatt
gctcctcctttggccatcagtccccagcaagtgccccagcctctgcccatacgcaaggcc
aagaccaaagagggcaaggggcccggagtgaggaagaagaacaaaggcgccaaagactcc
aagaaaaagggcaggagcaagagagtggcggggctcaagttccgcttcggagggatcagc
aagaggaagaagggctcctcgagcgaggaggatgaacgggaggactcagatttggacaat
gccagcatccacagctcttcagtgcggtccgagtgctctgcagctctgggcaagaagaac
aagaggaggcgcaagaagaagaggattgatgatggcgacggctatgagactgaccaccag
gactactgtgaggtgtgccagcagggaggcgagatcattctctgtgacacctgcccgagg
gcgtaccacctggtctgcctggacccggagctggagaaggctccagagggcaagtggagc
tgcccgcactgtgagaaggaggggatccagtgggagccgaaggatgatgatgaggaagag
gaggagggcggctgcgaggaggaggaagatgaccacatggagttctgccgcgtgtgcaag
gacggtggcgagctcctgtgctgtgatgcctgtccttcctcctaccacctgcactgcctt
aacccgccgctgccggagatcccgaacggtgaatggctctgcccgcgctgtacatgtccc
ccgctgaagggcaaagtccagcggatcctacactggaggtggacggaacccccggctccc
tttgtggtggggctgccgggtccagaggtggagccgggcatgcccccgcccaggcctctg
gagggcatacctgagagagagttctttgtcaagtgggctggtctctcctactggcactgc
tcctgggtgaaggagctacagttggagctgtaccacactgtgatgtatcgcaactaccaa
agaaagaatgacatggacgaacctccgccctttgattacggctccggcgacgaggacggt
aagagcgagaaacggaagaacaaggaccccctctacgccaagatggaggaacgtttctac
cgctatggcatcaagcccgagtggatgatggtgcaccgcatcctgaaccacagcttcgac
aagaagggggacgtgcattacctgatcaagtggaaggacctgccctacgaccagtgcacc
tgggaggttgatgagatcgacatcccctactacgacaacctgaagcaggcctactggggc
cacagggaactgatgctgggggaggataccaggctgcccaagaggctggtgaagaagggc
aagaagctgaaggacgataaacaagagaagccaccggacacgcccattgtggaccccaca
gtcaagttcgacaagcagccgtggtacatcgactccacaggaggcacactgcacccttac
cagctggagggccttaactggctgcgcttctcctgggcccagggcaccgacactatcctg
gctgacgagatgggtttggggaagacagtgcagaccattgtgtttctctattctctgtac
aaggagggccactccaaggggccttacctagtcagcgcgcccctgtccaccatcatcaat
tgggaacgggagtttgagatgtgggcacctgacttttacgtggtcacctacacgggggac
aaggagagccgctccgtgatccgcgagaacgagttttcctttgaggacaacgccattcgt
ggtgggaagaaagtattccgcatgaagaaggaagtgcagatcaagttccacgtgctgctc
acctcgtacgagctcatcaccatcgaccaggccatcctgggctccatcgagtgggcctgc
ctcgtggtggacgaggctcaccggctgaagaacaaccagtccaagttctttagggtcttg
aatagctacaagatcgactacaagctgctgctgacggggacccccctccagaacaacctg
gaggagctgttccatctcctcaacttcctgactccagagaggttcaacaatctggaaggc
ttcttggaggagtttgccgacatctccaaggaagatcagatcaaaaagctgcacgacctg
ctgggcccacacatgcttcggaggctcaaggccgacgtgttcaagaacatgccggctaag
acggagctgatcgtccgcgtggagctgagccagatgcagaagaagtactacaagttcatc
ctgacgcgaaactttgaggcgctcaactccaaggggggcggcaaccaggtgtctctgctc
aacatcatgatggacctgaagaagtgctgcaaccacccgtacctcttccccgtggctgcc
gtggaggcccctgttctgcccaatggctcctacgacggcagctccctggtcaagtcttcg
gggaagctcatgctgctgcagaagatgctgaagaagctccgagacgaagggcaccgcgtg
ctcatcttctcccagatgaccaagatgttggacctcttggaggacttcctggagtatgag
ggctacaagtatgagcggattgacgggggcatcactgggggtctccggcaagaggccatc
gacagattcaatgctcccggggcccaacagttctgcttcctgctctcaacacgagccggt
ggcctgggcatcaatttggccacagcagacacagtcatcatttatgactctgactggaac
ccccacaatgacatccaggccttcagccgtgcccaccgcatcgggcagaacaagaaggtc
atgatctaccgcttcgtgacgcgggcctccgtggaggagcgcatcacgcaggtggccaag
cgcaagatgatgctcacgcacctggtggtgcggccgggcctgggctccaagtcgggctcc
atgaccaagcaggagctggacgacatccttaagttcgggacagaggagcttttcaaggac
gacgtggaaggcatgatgtcccagggccagaggccgtccacacccatccctgacatgcag
tccaccaagggatctctggctgccggcgcaaagaaaaagcacggcagcaccccgccaggt
gacaacaaagacgtagaggacagcagtgtgatccattacgacgacgcagccatatccaag
ctactggatcggaaccaggacgccacggatgacaccgagctgcagaacatgaacgagtac
ctgagctccttcaaggtggcgcagtatgtggtccgcgaggaagatggcgtggaggaggtc
gagagggaggtcatcaaacaggaggagaacgtggaccccgactactgggagaagctgttg
cgccatcactacgagcagcagcaggaggacctggcccgcaacctgggcaagggcaagcgc
atccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggagtggcaggatgag
ctctcggacaaccagtcggagtattccatcggctctgaggacgaggacgaggacttcgag
gagaggccggaagggcagagtggacgacgacagtccaggaggcagctcaagagtgacagg
gacaagcccttgccgcctctcctggctcgggttgggggcaacattgaggttctgggcttc
aatgccaggcagaggaaagcctttttgaacgctatcatgcgctggggcatgccccctcag
gatgccttcaactctcactggctggtgcgcgaccttcgtgggaagagcgagaaggaattt
agggcctatgtctcactcttcatgcgccacctgtgtgagccgggcgcagacggcgcggag
accttcgcagacggcgtgccccgggagggcctgtccaggcagcacgtgctcacgcgtatc
ggcgtcatgtcgctggttaggaagaaggtgcaggaatttgaacatgtgaacggcaagtac
agcaccccggacctggtccccgaggggcctgagggcaagaagccgggtgacatcatctcc
tcagaccccaacacacccgtgcctgccagccctgcacagctcccaccggctcccctgggc
ctgccagacaaaacagaagcccagctgggctacacggatgagaaggagtcaggcatgcag
aagccgaagaagtccctggaaatccaggccctgccaactgccctggacagagtagagggt
gaggacaagcaccagagctcagacagcaaggacagagctcgggaggagaggctggaggag
gtggagaagacccagggctccccggagcagccgctgaaagaggaagtgctggtggacaag
gagccaatcccagacaagctggcgctgagcttgagtcacagcggcgatttccggccagat
gaccccaaggctgaggagaaggagcccatggagactcagcaaaacggcgacagagaggaa
gatgaggagggcaagaaagaagacaagaacgggaaattcaaattcatgttcaacattgca
gatggcggtttcacagagctgcacactctgtggcagaatgaggaacgggcggctgtgtcc
tcggggaagatctacgaaatctggcaccgccggcacgactactggctgctagcaggcatt
gtgacacatggctatgcccgctggcaggacattcagaatgacccgaggtacatcatccta
aatgaacccttcaagtctgaggttcataagggcaactacttggagatgaagaacaagttt
ttggcccgtagattcaagctgctggagcaggcactggtgatcgaggagcagctccggagg
gcagcgtatctcaacatgacccaggatcccaaccaccccgccatggcactcaatgcccgc
ctggcagaggtggagtgccttgctgagagccaccagcacctatccaaggagtccctcgcc
gggaacaagcctgccaacgctgtcctgcacaaggtcctgaaccaactagaggagctgctg
agtgacatgaaggcagatgtgacgcgattgccctccatgctgtcacgcatcccgccggtg
gctgcccgcctgcagatgtcggagcgcagcatcctgagtcgcctgaccaaccgcgctggc
gaccccaccattcagcagacatctagccgtcctcgtgacttccccctgtttcagcgctcc
tttccagccgagccaagccacctgcccaacccccacgggagagaaaagctacagcccttg
tag
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integrated database retrieval system
