Apodemus sylvaticus (European woodmouse): 127680500
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Entry
127680500 CDS
T10613
Symbol
Rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04140
Autophagy - animal
asyl04211
Longevity regulating pathway
asyl05010
Alzheimer disease
asyl05014
Amyotrophic lateral sclerosis
asyl05016
Huntington disease
asyl05017
Spinocerebellar ataxia
asyl05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127680500 (Rb1cc1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
127680500 (Rb1cc1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
127680500 (Rb1cc1)
05014 Amyotrophic lateral sclerosis
127680500 (Rb1cc1)
05016 Huntington disease
127680500 (Rb1cc1)
05017 Spinocerebellar ataxia
127680500 (Rb1cc1)
05022 Pathways of neurodegeneration - multiple diseases
127680500 (Rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asyl01009
]
127680500 (Rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127680500 (Rb1cc1)
03029 Mitochondrial biogenesis [BR:
asyl03029
]
127680500 (Rb1cc1)
Protein phosphatases and associated proteins [BR:
asyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127680500 (Rb1cc1)
Membrane trafficking [BR:
asyl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127680500 (Rb1cc1)
Mitochondrial biogenesis [BR:
asyl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127680500 (Rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
127680500
NCBI-ProteinID:
XP_052031949
LinkDB
All DBs
Position
3:complement(14857677..14912132)
Genome browser
AA seq
1588 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSDYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLNEHEGSEKAEMKRSSEL
VLSPDMPKTTNTSLLTSFHKSMEHVAPDLTDAERGKELRESCQSPVQQEEASVDAKDSDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFMLECHQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVMELLE
RVRIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFKGLDSWPSSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSTSQASPQSAASPRIESTTG
ITTTTSPKTPPPLIVQDTLCPAVCPLEELSPDSIDAHTFDFETISHPNTEQTVHQASIDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTS
TRGNEGLGDRAALHVQLEKCRVAAQDSHISIQTIKDDLCHFRTFVQKEQCDLSNYLKCTA
VEIRNIIEKVKYSLEVTLKEKHQQELQSLKIEYECKLDALAKDSEENVNKILKLKEDLVS
LEEALQNKDNEFTSIKLEKDAIVCMQQDKDQKLLEMENIMHTQNCEIKELKQSREMVLED
LKRLHEEKLVSLRAEFQCLEQSHLKELEDTLRIRHTQESEKVITDHKMSLEKLKKENQQK
IDQMLESHASTIQEKEQELQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRTQ
QKETLKSLLEQETENLRTEINKLNQKIHDNNESYQVGLSELRALMTIEKDQCISELISRH
EEESNILKAELDNVTSLHHQAFEVEKKLNEQIVELQTKLNSELSALEKQKDEKINQQEEK
YEALLQNLEKDKERLAMNHKQDKEELIQKLNFEKDKAVQTALDQFKLERELVEKELLEKV
KHLENQIAKSSAIESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSL
IAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKQ
LEEEVSKLRTSSFLPSAPVGAAPELYGACAPELPGEPERSLMETAEEGRVDSAMETSMMS
VQENMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSLSSVSSRHSEKIAIRDFQVGDL
VLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQ
AKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttctggttaacactggaaccacgctaacatttgacactgagcta
actgtgcaaactgtggccgatcttaagcacgccattcaaagcaaatacaagattgctatt
cagcaccaggtgctagtggtcaacggaggagaatgcatggctgccgatcgaagagtgtgt
acttacagcgctgggacggacacaaatccaatttttctttttaataaagaaatgatctta
tgtgaccgtgcacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagttgaagagtctcttatgatgcctgcagtgtttcacactgtggcttcaaggacacag
cttgcagtggaaatgtatgaagtggccaagaagctttgttctttctgtgaaggtcttgtc
catgatgaacatcttcagcaccaaggctgggctgcaattatggccaatctggaggactgt
tcaaattcataccaaaaacttcttttcaagtttgaaagtatttattctgattatcttcag
tccatagaagacatcaagctaaaacttactcatttaggaactgcggtttcagtaatggcc
aagataccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattcattaaatgaacatgaaggctcagagaaagctgaaatgaaaagatcttctgaactg
gtgctctctcctgatatgcctaaaacaactaacacatccttgttaacctcatttcacaag
tcaatggagcatgtagctccagatctcaccgatgctgaacgtggcaaggaacttagggaa
tcttgtcaaagtcctgtccagcaagaagaagcttcagtggatgctaaagacagtgatctg
cctttttttaatgtttctttgttagactggataaatgttcaagatagacctaatgatgtg
gaatctctggtcaggaagtgctttgattctatgagcaggcttgacccaaagattattcaa
ccgtttatgttagaatgccatcagactattgccaaacttgataatcagaatatgaaagcc
attaaagggcttgaagatcggctgtatgccttggaccagatgattgctagctgtagccgg
ctggtaaatgaacagaaagagcttgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtgttacctgatctgtgcctgagtcatgcaaatcagctaatg
attatgttgcaaaaccacagaaaactgttggatattaaacagaagtgtaccactgccaaa
caagagctagcaaacaatcttcatgtcagactaaagtggtgttgttttgtgatgcttcat
gctgaccaggatggagagaagctgcaagccttgctgcgcctggtgatggagctgctggag
agagtccggattgtcgaggctctcagcaccgtccctcagatgtactgcctggctgttgtt
gaggttgtgaggaggaaaatgttcattaaacactacagagagtgggctggtgctttagtc
aaagatggaaaacagctatacgaagctgaaaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcctttttaagaaatcgtctgtttaagggactggactcctggccttcctca
ttttgtactcagaagcctcgaaaatttgactgtgaacttccagatatatcattaaaagat
ttacagtttcttcaatcattttgtccttcagaagtgcagccattcctcagggttccctta
ctttgtgactttgaacctctacaccagcatgtacttgccctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctgctgaatgaacaaaaggta
tccacaagtcaggcatccccacagtcagctgcttctccaagaatagaaagtacaacaggc
attacaactactacctcaccaaaaactcctcctccactaattgttcaggataccttatgt
ccggcagtgtgtcccttagaagaattatctccagatagcatcgatgctcatacatttgat
tttgaaaccatctcccatccaaacacagaacaaactgttcaccaagcttctatagacttg
gattcattagcagaaagtcccgagtctgactttatgtctgctgtgaatgagtttgtgata
gaagaaaatttatcgtctcctaaccctataagtgatccacaaagtccagaaatgatggtg
gagtcactttattcttcagtcatcaatgcaatagatagtaggcgcatgcaagacacaagc
acacgcgggaacgagggccttggggatcgggctgcattacatgtccagctggagaaatgc
agagttgctgctcaagactctcacattagtatacaaaccatcaaggatgatctatgccac
tttagaacattcgtacaaaaagaacagtgtgacttatcaaattatttaaaatgtacagct
gtagaaataagaaatattattgaaaaagtaaaatattccctagaagtaacactaaaggaa
aagcatcagcaagaactccaatctttaaaaattgagtatgaatgcaaacttgatgctcta
gcaaaagacagtgaagaaaatgtaaataaaattttaaaattgaaagaagatttagtttcc
cttgaggaggctttacaaaataaagataatgaatttacttcaattaaacttgaaaaggat
gctattgtctgcatgcagcaagataaggatcagaagttgttagagatggaaaatataatg
catactcagaattgtgaaattaaagaactgaagcagtcacgagagatggtgttagaagac
ctgaaaaggctgcatgaggaaaaactagtgtcattgagagcagaatttcagtgcttagag
caaagtcacctaaaggaattagaggacacactgcgtatcaggcacacacaggagtctgag
aaagttataacagaccacaaaatgtctttggagaaattaaaaaaggaaaatcagcaaaaa
attgaccagatgctagaatctcatgcctcaactattcaggaaaaagagcaagagttgcag
gaattgaaactcaaggtctctgacttgtcagacatgaggtgtaagttagaggttgaactt
gcactaaaggaagcagaaacggatgagataaagatcttgttggaagagagcagaacacag
cagaaggaaacgttgaagtctctacttgaacaagagactgaaaatttaagaacagaaata
aataaactaaaccaaaaaattcatgataataatgagagttatcaggtaggtttatcagag
ttaagagctttaatgacaattgaaaaagatcagtgcatttcagagttaatcagtagacat
gaagaagaatctaatatacttaaggctgaattagacaatgttacatctttgcatcaccaa
gcatttgaagtagaaaaaaaattgaatgaacaaatagttgaattgcagactaaattgaac
tcagaactgagtgctcttgaaaaacaaaaagatgagaaaataaaccaacaagaagagaag
tatgaagcacttcttcagaaccttgagaaagacaaggagagattggccatgaaccacaag
caagacaaagaagagttaattcagaagcttaattttgaaaaagacaaagctgttcaaact
gcactagatcaatttaaattggagagagaacttgttgagaaagagttattagaaaaagtt
aaacatcttgagaatcaaatagccaaaagttctgccattgagtcagccagagaagattct
tcaagcttagttgctgaacttcaagagaaacttcaggaagaaaaagctaagtttctggaa
caacttgaagagcaagaaaaaagaaagaatgaagaaatgcagaatgttcgaacctctttg
attgctgagcagcagaccaactttaacacagtcttaacaagagagaaaatgaggaaagaa
aacataataaacgatcttagtgataagctaaaaagtacaatgcagcagcaagagcgggat
aaagatttgatagagtcgctctctgaggaccgagctcggctgcttgaagagaagaagcag
ctggaagaggaagtgagtaaactgcgcactagcagcttcctcccctcagcacccgtgggg
gcagccccagagctttacggtgcttgtgcacctgagctccccggcgagccagagagatcg
cttatggagacagcagaggaagggagagtggactcggccatggagacaagcatgatgtct
gtccaagaaaatatgctatctgaagagaagcagaggatcatgctcctagaacggacattg
cagttgaaagaagaagaaaacaagcggttaaatcaaagactgatgtctcagagtttgtcc
tcagtatcttcaaggcattctgaaaaaatagccattagagattttcaggtgggagatttg
gttctcatcatcctagatgagcggcatgacaattatgtgttgtttactgttagtcctact
ttgtatttcctgcattcagagtctcttcctgccctggatctcaaacccggtgagggagct
tcaggtgcatctagaagaccctgggttctcggaaaagtaatggaaaaggaatactgtcaa
gccaaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtgaaa
gctgtgtcatggaataagaaggtatag
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integrated database retrieval system
