Apodemus sylvaticus (European woodmouse): 127680555
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Entry
127680555 CDS
T10613
Symbol
Cdh17
Name
(RefSeq) cadherin-17 isoform X1
KO
K06811
cadherin 17, LI cadherin
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
127680555 (Cdh17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asyl04515
]
127680555 (Cdh17)
Cell adhesion molecules [BR:
asyl04515
]
Cadherins
Major cadherins
127680555 (Cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
127680555
NCBI-ProteinID:
XP_052032049
LinkDB
All DBs
Position
3:25547298..25627779
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AA seq
837 aa
AA seq
DB search
MHRSPSEESKMVPARLHFLCLLTLYLTSGYGQDGKFSGPLKPMTFSIFEGQEPSQIIFQF
KVNPPAVAFELTGETDGIFKIEQDGLLYYTTALDRETRAVHHLQLTALDSQGAIVEGPVP
IIIEVKDINDNRPTFLQRKYEGSVRQNSRPGKPFMSVNATDLDDPTTLNGQLSYQIVIQL
PKISNAMYFQINNKTGEISLTPEGSQELDPVKNPSYSLVVSVKDMGGQSENSFSDTTSVD
ITVRENIWKAPEPVEIRENLTDSHPIKITQVQWNDPGAQYSLTNKEKLPQFPFSIDQEGN
IYVTQPLDREEKDSYVFFATAKDENGKPLSYPLEIHVTVIDINDNPPTCLAPLVVFEVQE
NERLGNSIGVFAAHDMDEPDNINSILKYKLVDQTPKVPSDGLFLIDEYEGKVQLSKQSLK
KQDSPQYNLTVEVSDIDFKTLCSIQVNVIDINDQIPIFEVSDYGNKTFSEDIAIGSIILV
IQATDADEPFTGSSKILYNIVQGDPEGRLEVVTDPKTSAGYVKIKKPLDFETQPVTRIVF
QATNPEPLVEGVEYNASSFASFQLIVTDVNEVPVFPQQIFLANVSEDAAVGTKVGNVTAR
DPEGLAVSYSLKGDTRGWLKIDSVTGEIFSAAPLDRETESVYRVQVVATEVGGSSLTSTA
HFHLALTDVNDNPPRLAKEYTGLFFCHPLTSPGSLVFEATDDDQQSLWRPKFTFALGRES
LQSDWDVSKINGTHARLSTKHTRFEEQVYDIPILINDAGQPPMEGMVSLSVTFCQCVEGS
CFRPAGRQDGIPTVGMAVGILLTTFLVIGIILAVVFIRMRKDKVENPQSPENQPLRS
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggagtccaagtgaagagagcaagatggtccctgcccggcttcatttcctgtgt
cttctcacactttatttgaccagtggatatggccaagatgggaagttcagcggtcccctg
aagcctatgacattctctattttcgaaggccaagaaccgagtcaaatcatattccagttt
aaggtcaaccctccagctgtggcttttgagctaacgggagaaaccgatggcatatttaag
atagaacaggatggacttctgtattacacaacagccctggacagagaaacaagagcagtc
catcatctgcagcttacagccttggattctcagggagctatagtggaaggcccagtcccc
atcatcatagaagtcaaggacatcaatgacaaccgacctacatttctccagagaaaatat
gaaggctcagtgaggcagaactctcgcccaggaaagcctttcatgtctgtcaatgctaca
gacctcgatgatccgactactctcaatggccagctttcttatcaaattgtcatccaactt
cccaaaatcagcaatgctatgtactttcagatcaacaataaaacaggggaaatatcgctt
accccagaaggatctcaggaattggatccagtgaagaatccttcttacagcctggtggtc
tcagtgaaggacatggggggccagagtgagaattccttcagtgacaccacatctgtggat
attactgtcagagagaacatctggaaagcaccagaacctgtggagattagagaaaacttg
actgattctcaccccatcaaaatcactcaggtccagtggaatgacccaggggcgcagtat
tccctaaccaacaaggagaagttgcctcagttccccttctctattgaccaagaaggaaat
atttacgtgactcagcccttggaccgggaggaaaaggactcatatgttttctttgcaact
gccaaggatgagaatggaaaaccactctcctatccgctggagattcatgtgacagttatt
gacatcaatgacaacccaccgacatgtctggctccactggttgtatttgaagtccaggag
aatgaaagattgggtaacagcattggggtctttgctgcccatgatatggacgaacctgac
aatatcaacagtattctgaagtacaaacttgtagaccaaacacccaaagttccctcagat
ggactctttcttattgacgaatatgagggaaaggtccagttgagtaaacagtccttgaag
aagcaagacagtcctcagtacaacttaacagtggaggtgtctgacatagatttcaagact
ctctgttctatccaagtcaacgttattgatatcaacgatcagattcccatctttgaagta
tcagactatggaaacaagactttctctgaagacatagccatcggatccatcatcttagtc
atccaagctacagatgctgatgagccttttacagggagctctaaaattctgtacaatatt
gtacagggagaccctgagggaagactggaagttgtcacagatcccaagaccagtgcagga
tatgtcaagatcaaaaagcctcttgattttgaaactcaaccagttaccagaattgtgttc
caagcaacaaaccctgagccgctggtggaaggcgtggagtacaatgctagctcctttgcc
tccttccagctgattgtgacggatgtgaatgaagtgcctgtatttccccagcaaatattc
ctggcaaacgtcagcgaggatgctgctgtaggcactaaagtgggcaacgtgactgccagg
gatcctgaaggcctggctgtgagttattcactgaaaggcgatacgagaggctggcttaaa
atcgactctgtcactggtgagatatttagcgctgctccgctggacagggaaacggaaagt
gtgtaccgagtacaagtggtagccactgaagtaggtgggtcctctctgacttccacggca
catttccacctggccctcacggatgtgaatgacaacccccctcgcctagctaaggagtac
acaggcttgttcttctgccatcccctcacttcccctgggagcctcgtctttgaggccact
gatgatgaccagcagtcactatggaggcccaagtttacatttgcccttggcagagaaagc
ttacaaagtgactgggacgtttccaaaatcaatggtacccatgctagactctccaccaag
cacacacgctttgaggaacaagtttatgacatcccaatcctcatcaatgatgcaggacag
ccacccatggaagggatggtctccttatcagttactttctgccagtgtgtggaaggaagc
tgcttccggccagcaggcaggcaggatgggattcccacggtgggcatggcagttggcata
cttctgaccacatttctggtcattggtataattttagcagttgtattcatccgcatgagg
aaagataaagttgaaaatccacagtcccctgagaatcagcctctgagaagctga
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