KEGG   Apodemus sylvaticus (European woodmouse): 127680571
Entry
127680571         CDS       T10613                                 
Symbol
Nbn
Name
(RefSeq) nibrin isoform X1
  KO
K10867  nibrin
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl03440  Homologous recombination
asyl04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    127680571 (Nbn)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    127680571 (Nbn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asyl03032]
    127680571 (Nbn)
   03400 DNA repair and recombination proteins [BR:asyl03400]
    127680571 (Nbn)
DNA replication proteins [BR:asyl03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    127680571 (Nbn)
DNA repair and recombination proteins [BR:asyl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     127680571 (Nbn)
    BRCA1-C complex
     127680571 (Nbn)
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl PTCB-BRCT
Other DBs
NCBI-GeneID: 127680571
NCBI-ProteinID: XP_052032078
LinkDB
Position
3:29564253..29595649
AA seq 748 aa
MWKLLPAAAAAPGEPYRLLAGVEYIVGRKNCAILIENDQSISRNHAVLRVNFPETNLSQT
DEIPTLTIKDNSKYGTFVNEEKMQTGLSCALRTGDRVTFGVFESKFRVEYEPLVVCSSCL
DVSGKTVLNQAILQLGGLTANNWTEECTHLVMSSVKVTIKTICALICGRPVIKPEYFSEF
LKAVESKKQPPEIESFYPPIDEPAIGSKSVDLSGRHERKQIFKGKTFVFFNAKQHKKLSL
AVALGGGEARLMAEEDEEEQSFFSAPGTCVVDVGITNTQLIITESQKKWIHLIMDILQSN
GLRPIPEAEIGLAVIFMTTENYCNPQGQPCTELKTTTPGPSLSQGLSANGKIIPSAPVNM
TTYVADTESEPADTCMSLSERPKEVKIPGLKQDSRKLSQDTCNIKEAPKPSSKANKVASD
ALVRGKGPSYPLSPMKLPAANKNKDWTSQQQQNSIKNYFQPCTRKRERDEEDPELSSCKS
SRLELSSSLLEPTQPAGPSLWKSKEHQSRSATLDREADASFVGEVDIKPNGKSPDSKSLP
TENLRPKKRKVDLATEEEALEESLKTAKPELAVEVKVEGPEADVTIRKKPRIGAERDQPL
NGRSVQESNGGLQEDETEKKDELQKESWSTKHEIATRDEHLDSSEELPIKLLLTEFRSLV
VRNHTSRNVCVSDCGPLRNFKKFKKAVFPGAGKLPHIIGGSDLVGHHARKNTDLEEWLRQ
EMEAQKQQAKEESLADDLFRYNPNVKRR
NT seq 2247 nt   +upstreamnt  +downstreamnt
atgtggaagctgctcccggccgcagctgcggctccaggagaaccatacagacttttggct
ggtgtagagtacattgttgggagaaaaaactgcgccattctaatagaaaatgatcagtca
atcagtcggaaccatgctgtcttaagagtaaactttcctgaaaccaatttgagtcaaaca
gatgaaatccctacattaacaataaaagataattctaagtatggaacctttgttaatgaa
gaaaaaatgcagactggtctttcctgcgctttgaggacaggagatagagttacctttggg
gtgtttgaaagtaaattcagagtagaatacgaacctttggttgtttgttcttcttgttta
gatgtctctgggaaaactgttttaaatcaagctatattacagcttggaggacttactgca
aacaactggacagaagaatgcactcaccttgtcatgtcgtcagttaaagtcaccattaaa
actatatgtgcactcatttgtggacgtccagttataaaaccggaatacttttcagaattt
ctcaaagcagttgagtctaagaaacagcctccagaaattgaaagtttttacccacccatt
gatgaaccagctattggaagtaaaagtgttgatctgtcaggacgacatgaaagaaaacag
atcttcaaaggaaaaacatttgtatttttcaatgccaagcagcacaagaaactcagcttg
gcagtggctctcggaggtggggaagccaggctgatggcagaagaagatgaagaggagcag
agcttcttttcagctcccggaacctgtgttgttgatgtgggaataacgaatacacagctc
ataattacagagtcccagaaaaaatggattcatttaataatggatatacttcaaagcaat
ggtctcagacctattcctgaagcggagattggattggctgttatttttatgactacagag
aattactgtaatccacagggccagccttgtacagaattaaagacaacgactccaggacca
agtctttcccagggcctctcagccaatggaaaaataatcccaagtgctccagtgaacatg
accacatatgtagctgacacagaatcagagccagcagatacatgtatgtctttgagtgaa
agaccaaaagaagtaaagatccctggactgaaacaagactctaggaagctttcacaagat
acgtgcaacataaaggaggcccctaaaccgagctccaaagctaataaggtcgcgtcagat
gcgctggttaggggaaagggcccgagctatccgctttctccaatgaagcttcctgctgca
aataaaaataaagattggacttctcagcagcaacagaactccatcaaaaactacttccag
ccatgtaccagaaaaagggaaagggacgaagaagatccagaactgtcctcatgcaaatca
tcaagactggaactctcctcttctctcttggaaccaacacaacctgccggaccctcactg
tggaaaagcaaggagcaccagtctcgcagtgcgactctggacagggaagccgacgcctcg
tttgtgggggaagtagacataaaacccaatgggaagagtcctgacagtaaatcacttccc
acagaaaatcttagaccaaaaaaaagaaaagttgatttagctacagaagaggaagcattg
gaagagtcactcaagactgcaaagccagagctggcagttgaagtgaaggttgaagggccg
gaagcagatgtcaccatcagaaaaaagccaaggatcggtgcagagagggatcagcccctg
aatggcagatcagtgcaggaaagcaatggcggacttcaagaagatgaaacagaaaagaag
gatgagcttcagaaagaatcatggtcaacaaaacatgaaatagctactcgtgatgaacat
ctggacagtagtgaggagcttcccataaaactgctgctgactgaatttaggtcattggtt
gtccgtaaccacacttccagaaatgtgtgtgtgagtgattgtggtccactgaggaatttc
aagaaatttaagaaggctgtgtttcctggagcgggaaagctcccacacatcattggagga
tcagacttagtaggtcaccatgctcggaagaataccgacttagaagagtggttgagacag
gaaatggaggcacagaagcaacaagcaaaagaagagtctcttgctgatgatttatttaga
tataatcctaatgtaaaaagaagataa

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