Apodemus sylvaticus (European woodmouse): 127680644
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Entry
127680644 CDS
T10613
Symbol
Topors
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127680644 (Topors)
03036 Chromosome and associated proteins [BR:
asyl03036
]
127680644 (Topors)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asyl03037
]
127680644 (Topors)
Enzymes [BR:
asyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127680644 (Topors)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127680644 (Topors)
UBL E3 ligases
127680644 (Topors)
Chromosome and associated proteins [BR:
asyl03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
127680644 (Topors)
Cilium and associated proteins [BR:
asyl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127680644 (Topors)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI_Topors
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
127680644
NCBI-ProteinID:
XP_052032202
LinkDB
All DBs
Position
3:complement(54572889..54582178)
Genome browser
AA seq
1040 aa
AA seq
DB search
MGSQPPPPGSPLSREEGEAPPLAPAEEGRRRSRRVRLRGSCRHRPSLLGRRELASSGPAV
PATGSSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRC
LHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFTNPEVRRF
RYRTTMTRERNASLYSPSSTVSRRTTTPPDSGVLFEGLGISARPRDVDIPQFMRQMALRG
PTAADERSLRKIQEQDIINFRRTLYRAGVRVRSIEDGGRYRDISAEFFRRNPACLHRLVP
WLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISF
ARSPFNMAAFDQHANYDCPPSSEGSRSDSSVITISPDEAETQEVDMNVSTIRQAPWDDET
PGPSYSSSEQAHVGVSSLLNSSDSSDEELVSVGTTSQIPRVQTNDDVNDDSDSSSDNCVI
VGFVKPLAERTPELVELSSDSEELDSYDKVETVKTQEQEQSYSSGDSDASPPSSPRSVLG
KDEQMSKSHCDSDTRINSKKEEKRATSLPTPRDSSSARGDRVCSPYNHRHRKGGRSRSSD
SRSQSRSGHDQRNHRKHHGKKRLKTKRSRSRESSSRPRTRKDKKRSRTRDSSWSRRSQTL
SLSSGSTSRSRSRSSDHGKRRSRSRNRDRYYLRNNYGSKYKWEYTYYSRNKDRDGYESSY
RRRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNHSERKYYYYERRRSRSVSSNRSRTTS
AGPDRVRSEKPGGKRKYKTRHLESSNEEAQPSREFASKVKDSHYQKPKVDGNYKNESDSF
SDSRSSDRETKHKRRKRRTRSLSVEIVYEGKATDTSKHHKKKKKKHKKKHKKHHGENTSR
SPVVITIDSDSDRDSEVKAGVECSNSSLPQLVQDEVLTPSSEAFQTKDVVTIEDDLGVLD
KECDVMALTSDLSTSQTVENSESPAVSVEQTLDIRDESTFASDLESQSSNVSLQTEPWRP
LPSPRTSLASVSPGRDCDMS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagccgccgccaccggggtctccgctgtctcgcgaggagggtgaagcgccc
cctctggcgcctgccgaggaggggaggcgcagaagccgccgggtacgccttcgcggatcc
tgccgccaccggccgagcttactgggccggcgggagctggcttctagcggcccagcggtc
cctgccaccgggtcctcggagataatggcctcagctgctaaggaatttaaaatggacaac
ttttcacctaaagctggcactagcaaattgcaacagacagtaccagctgatgcatctcct
gattctaagtgtcctatctgcttggatagatttgataatgtgtcttacttagatcgctgc
ctacataagttctgttttcgctgcgtgcaagagtggtcaaaaaacaaagccgagtgccca
ctgtgtaaacagccctttgattctattttccattctgtgagggctgaagatgacttcaag
gagtatgtcctaagaccatcctataatggttcctttaccaaccctgaggttcgaaggttt
cgctaccggacaactatgacaagagaacggaacgcctctctttactcacccagtagtact
gtaagtaggagaacaaccacaccaccagacagtggagtgctgtttgaagggttaggcatt
tcagcaagacctagagatgttgacattcctcaatttatgagacagatggcattaaggggg
ccaactgctgcagatgagagatctttgcggaaaattcaagaacaagatattattaatttc
aggcgaactctttatcgtgctggtgttcgcgttagaagcattgaagatggtggccgctac
agggatatctcagctgagttcttccgtagaaatccagcttgccttcacagattagttcct
tggttaaaacgtgaacttactgttctttttggagcccatggttcgttagtcaatattgtc
cagcacatcatcatgagtaatgttactcgctatgatttggagagtcaggcatttgtgtct
gacttaagaccatttttgcttaatcgaactgagcattttatacatgaatttatcagtttt
gctagatctcccttcaatatggcagcttttgaccagcatgctaattatgattgccctcct
tcatctgaaggcagccgttctgattcttcagtcattacaatatctccagatgaggctgaa
actcaagaggtagatatgaatgtatctactattaggcaggcaccatgggatgatgaaact
cctggaccatcttattcaagttcagagcaagcgcatgttggagtgtcttcccttttaaat
tcttcggacagttcagatgaagaacttgtctctgtaggaaccacatctcagataccacga
gtacagaccaatgatgatgtgaatgatgacagtgattcatcatcagataattgtgtcatt
gttgggtttgttaagccattagctgaaaggaccccagaacttgttgaactgtcttctgat
tctgaggagttggattcttatgataaggtagaaacagtgaagacacaagaacaggagcag
tcttacagttcgggtgatagtgatgctagtccgccttcatcaccacggtccgtccttgga
aaagatgaacaaatgagtaaaagccattgtgattctgacacaagaataaactcaaagaaa
gaagagaaacgagctacatcattgccaactcccagggatagctcatctgcaagaggtgac
agggtatgttccccatataaccatcgacacaggaagggaggaagatcgaggagttcagat
tctcggtcccagagtcgaagtggacatgatcagaggaatcataggaagcatcatgggaag
aaaagattgaagactaagagatccagaagtagggagagtagtagcagacctagaacaaga
aaggacaaaaagagatcaagaactagagatagcagctggtcacgaagaagccagactctc
tctctaagcagtggaagcactagtagatcaaggtctcgtagcagtgatcatggtaagaga
aggtcacggagcagaaatcgagatcgctattatttaaggaataattatggaagcaaatat
aagtgggaatatacttactatagcagaaacaaggacagagatggttatgaatcttcatat
aggaggaggactctttcaagagcccattattctagacaatcttcaagtccagaatttaga
attcaatctttttctgaaagaacaaacgccaggaagaagaatcacagtgaaaggaaatac
tactactatgaaaggcgccggtcaaggagcgtgtccagtaacaggtcgaggactacatca
gccgggcccgaccgagtgagaagcgaaaagcctggagggaaacggaagtacaaaacacgg
catttggaaagtagtaatgaagaggctcagccgtctcgtgagtttgcttccaaagtgaag
gacagtcattaccaaaaaccaaaagtggatggaaattataaaaatgagagtgacagcttt
tcagatagcagatcgtcagacagagagacaaaacacaagaggaggaaaaggaggacccgg
agcctaagtgtagagatagtttatgaaggaaaggctacggacacaagtaaacaccataaa
aagaaaaagaagaaacataagaagaagcataagaaacaccatggagagaatacttcacgg
tcgccagttgttataaccattgacagcgacagcgacagggattctgaagtaaaggcaggt
gttgaatgtagcaatagcagtcttccacagcttgtacaagatgaagtcttgactccgtcc
tcggaagcatttcaaactaaagatgttgtcacaatagaggatgatcttggtgtcctggac
aaggagtgcgatgttatggcacttactagtgatttgagtaccagccaaactgtggagaat
agtgaatcaccggcagtctcagttgaacaaactcttgatataagagacgaaagcaccttt
gcctctgatttggagagccagtccagtaatgtgtctcttcagactgaaccatggagacca
ttgccatctccacggacctcattagcatcagtgtctcctggtagagactgtgacatgtct
taa
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