Apodemus sylvaticus (European woodmouse): 127680846
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Entry
127680846 CDS
T10613
Symbol
Prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127680846 (Prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asyl03041
]
127680846 (Prpf4)
Spliceosome [BR:
asyl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127680846 (Prpf4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
127680846
NCBI-ProteinID:
XP_052032542
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Position
3:73908483..73925348
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AA seq
521 aa
AA seq
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MASSRASSTTTKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGAFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcacgagcctcctccacgacaactaagactaaagcgcctgacgacttagtt
gcacctgttgtgaagaaaccacacatctactatggaagcttggaagagaaagagcgggaa
cgcctggccaaaggagagtctgggattttgggaaaagaaggactcaaagccggcattgaa
gcaggaaatattaatataacatctggagaagtatttgagattgaagagcacatcagtgag
cggcaggcggaagtcttggcagagtttgaaagaagaaagcgagcccggcaaatcaatgtt
tccacagatgactcggaggtcaaggcttgcctcagagccttgggagaacctatcacgctt
tttggagagggccctgctgaacgaagagaaaggttaagaaatattctctcagtggtcggg
actgatgccttaaaaaagacaaaaaaggatgatgaaaaatctaaaaagtcaaaagaagag
taccagcagacctggtaccacgaagggccaaatagcctgaaggtggccagactgtggatt
gctaattattcactccccagggcaatgaaacgcttggaggaggcccgtctccataaggag
attcctgagacaaccagaacctcccagatgcaggagctgcacaagtctctccggtctttg
aataatttctgcagtcagattggcgatgaccggccgatctcctactgtcacttcagcccc
aactctaaaatgctagcaacggcttgttggagtgggctctgcaagctctggtctgtccct
gactgcagcctccttcacactctgcgaggccataacacaaatgtaggagcaattgtattc
catcccaaatccactgtctcattggaccaaaaagacgtcaacctggcctcttgtgctgct
gatggttctgtgaagctttggagtcttgacagtgatgaaccagtggcagatattgaaggc
catacagtgcgtgtggctcgggtaatgtggcatccatcagggcgtttcctgggcacaacc
tgttatgaccgttcatggcgcttatgggatttagaggctcaagaagagatcctgcaccag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggccgagtttgggacctacgcacaggacgctgcattatg
ttcctagaaggccacctgaaggaaatctacgggataaatttctcccccaatggctaccac
attgccactggcagtggtgacaacacctgcaaagtgtgggacctccggcaacgacgctgt
gtctacaccatccctgcccatcagaacttagtgaccggagtcaagtttgagcctatccat
ggagccttcttgctcacaggtgcctatgacaacacagccaagatctggactcacccaggc
tggtccccactgaagactctggccggtcatgagggcaaagtgatgggcctggacatttct
tctgatggtcaactcatagccacttgctcgtatgacagaaccttcaagctctggatggca
gagtag
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integrated database retrieval system
