Apodemus sylvaticus (European woodmouse): 127680896
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Entry
127680896 CDS
T10613
Symbol
Frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04512
ECM-receptor interaction
Brite
Lectins [BR:
asyl04091
]
C-Type lectins
Lecticans
127680896 (Frem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127680896
NCBI-ProteinID:
XP_052032648
LinkDB
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Position
3:complement(95676903..95839041)
Genome browser
AA seq
2172 aa
AA seq
DB search
MQTPGGTGTKSLFLLLQLLLLLLDPANATFISINRGLRVMKGSSAFLSGEHLRFAIPKEK
DACRVEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYVHNGCPILDEDSVKLRLYRFTETD
TFIETFLLRVYLVEPDCNIIRLSSNVLEVTEFYGLSQAIDKNLLQFDYDRTANLDCTIRL
DPARTQLPAHGKLVVVNRKSEGPRGDQPHSFFSETERGAGLRCPDGSCALEWKQVASLKV
SCEEFLRTGFHYQHVQPPSPNIDYISVQLELTDRRSKTVYKSESAWLPVHIRVGIPNQAP
RAAFMAAFVLEVDQFILTPLTTSVLDCEEDETPKPLLVFNVTKGPLQGYVTHLLDHTRPI
SSFTWKDLSDMQVAYQPPNSSHPERRHFKMELEVYDFFFEKSAPITVHVSIRTADTNAPR
VSWNTGLNLLEGQSRAITWEQFQIVDNDDIDAVQLVTIGGLQHGRLTVREGKGFLFTVTD
LQAGVVRYHHDDSDTTKDFVAFRIFDGQHSSHHKFPINILPKDDSPPFLITNVVIELEEG
KTILIQGSMLRASDMDSSDDYIYFNITKYPQAGEIMKKPGPRLIGYPVPGFLQRDLFNGI
IYYRHFGEEIFEDSFEFVLWDSHEPPNLSVPQVVTIHITPVDDQLPKEAPGSSRHLVVKE
TEVAYITKKHLHFLDMESHDGGLIYTVTRPPCFSFSHRHLDAGKIFMVDSIPKLAKNPAA
PGLSSFTQHAVNHMKVAYMPPMQDIGPIPRQVQFTVSVRSQHGSTLHGICFNITILPVDN
QVPEVFTNTLRVVEGGHCTISTEHILVSDVDTPLDSICLSLQEMPLHGGVELDGFPLNPR
GTFSWQDLCTLKVRYQHDGSEVLQDEVFLEVTDGTNSAQFSLHIEVFPVNDEPPVLKADL
IPMMHCSEGGEVTITPEYISATDADSNDLELLFMIAREPQCGVVRKAGLYVDRFSQGDVI
SGTVTYKHTGGEMGLEPCFDTVVLVVSDGEADPLVNGCCYDGPDSSVTLHKSFPTYQLNI
TVHPVDNQPPSVIIGEMFTVDEGFSAAITTHHLTVTDRDTAPDDLEFILASHPQFGYLEN
TLPSAGFEKSNMGITIASFQWTDIKASHINYVQSRHVRVEPTADQFMVYATDGKRRSLET
TFRVIINPINDEAPDLVVQNITVYEGHVMELDSSIISAADRDVPEDPLFCSIARKPQHGL
LIDAAGSEDSPQVKQLEHEIHNFSVDLLKNGMKLAYAHDDSESSADNFVIQLSDGKHKIL
KTISVNITPVNDETPTLSKKAEISMTVGDTRILSSAVLSAIDKDSPREKIHYLFERLPQN
GQLQLKIGRDWVPVSDGMQCTQEDVDLNLLRYTHAGKTDSQDGDSFTFYLWDEDNRSPAF
VCHIIIEDTGKGDIVIHAKPLVVVKGDRGLLTTATLLAVDGADKPEELLYLITSPPQYGQ
VESVHYPGVPITSFSQMDIAGQTVCYIHKSRTAVPSDSFRFTISNGLQTQHGVFEITLQT
VDSALPVLTKNERLRLAQGATGLLSTDHLQLTDPDTPPENLTFFLAQLPRHGFLYLRGKV
LQHNFTQRDVDSRGVAYRHSGGSAQEDCFTFLATDRDSQGFVVDGKVQKEPVRFTIQVDR
LDKAAPRITRLHSPSQVTLLKNGCYGIYITSHVLKASDPGTEDDQIIFKILRGPLHGRLE
NTTTGEFIHERFSQKDLSRKTILYVINPSLKVNSDILELQVMDPTGNTASPQSLELKWSY
IEWSQTEYEVCENVGLLPLEVTRRGYSLDSAFVGIEVNQVSALVGKDFTVTPSKLLQFDP
GMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTQTKAAVKILDSKGGRCHPSNSFN
QNKHSTWGKGRWHPLPSGSSSLTTSGSPHLERRPPPAFTKGDALQGFGLTDLSQRKMKAQ
GNGRSVLPSSVCTNGTDTIYNYHGIVSLKLEEDRFSAHKRKAKISIVSQPQRTIKVAELP
VADKVESATDSHFLRQGLRPLFPKNCSVELKGLFHFEESTHRLYQCDGISWKAWSPQTKG
LEDRSCPVGWLLHSGYCHILVTRQKATWTTATRACREQHRGDLVTVFSRRHMQWLWAVSG
RKPFWIGLRNQVRTGRWEWIGGEPAAFTNWKKGPPRHPKPGKNCVLVQKRGLWQSKNCNK
GKAHNFVCSRKL
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atgcagactccaggcggcactgggaccaagtctctgttcttgctgctccagctgcttctg
ctgctcctggacccggccaatgccaccttcatcagcatcaaccggggcctgagggtgatg
aagggtagttctgccttcctgtcaggagagcatctgaggtttgccatccctaaagagaag
gatgcctgcagagtggaggtggtgatgaatgagcccataacccagagggttgggaaactc
actccacaggtctttgattgtcatttccttcccaacgaagtaaagtatgttcacaatgga
tgcccaattctggacgaagactccgtgaagcttcgactttaccggtttaccgagacagac
accttcattgaaacctttctcttgagggtctatcttgtggaaccagactgtaacatcatc
cgtctgagcagcaatgtgttggaagtgactgaattctatggcttatcccaagccattgat
aagaacctgctccaatttgattatgataggacagccaatctggactgcaccatcagacta
gacccagcgaggactcagctgccagctcacggcaagctggttgtggtgaatcgcaagtca
gagggacctcgtggagatcagccacacagctttttctctgagacagagcgaggcgcagga
ctgaggtgcccggatggaagctgtgccctggaatggaagcaggtggcgagtctgaaagtg
agctgtgaggagttcctgcggacgggctttcactaccaacacgtgcaaccaccttcaccc
aacattgattacatctccgttcagttggagctcacggacagacggagcaaaaccgtatac
aagtcagagagtgcgtggttgcctgtccatatcagagttggcattcctaaccaggcccca
agggctgcgttcatggccgcgtttgttctggaggtggaccagttcatcctgacccctctg
acaacctccgttctggactgtgaggaggacgagactccgaaacccttgttggtgtttaac
gtcactaaaggcccgctccagggctatgtgacccaccttctggatcacaccagacccatc
tcttccttcacctggaaggatctcagtgacatgcaagtggcctaccagccaccaaacagc
agccaccctgagaggagacatttcaagatggagctggaggtgtacgacttcttctttgag
aagagcgcccccatcactgtccacgtctccatcagaacagcagacacaaatgcaccccgg
gtctcctggaatacaggtttgaatctcctagaggggcagtctcgagccatcacttgggaa
cagtttcagatcgttgacaatgatgacattgatgctgtgcagttggtcaccattggtggc
ctgcaacatggacgacttacagtcagagaggggaaaggatttctcttcactgtgactgac
cttcaggctggagttgttcgctatcatcatgatgacagtgacaccaccaaagactttgtg
gctttcaggatattcgatggccaacacagcagtcatcacaagtttcctatcaacatcttg
cccaaagatgatagccccccattcctcataaccaatgttgtgattgaactagaagagggg
aagaccatcttgatccaagggtccatgctgagagcttcagacatggactccagtgatgac
tacatctactttaatattacaaagtacccacaggctggggagatcatgaagaagccaggg
ccaagactcatagggtatccagtccctggcttccttcagagagacctgttcaatggaatc
atttactatcgtcactttggtgaagaaatctttgaggattcttttgaatttgtcctgtgg
gacagccacgaacctccaaacctctcagtgccacaggtggtgacaatccatatcactcca
gtagatgaccagcttcctaaagaagctcctggcagttctcggcatttggttgtcaaggaa
acggaggtggcctacatcactaaaaagcacctacatttcctagacatggaatcacatgat
gggggactcatctacacagtaactcgtcctccatgtttctccttcagccacagacacttg
gatgctgggaagatattcatggtggacagcataccgaagctagccaaaaatcctgcagcc
ccggggctcagctcattcactcagcatgccgtgaaccatatgaaagtggcctacatgcca
cccatgcaagacataggtcccatacctcgacaagttcagttcacagtgtcagtcaggagc
cagcatggaagtactttgcatggaatctgcttcaacatcacaattctcccagtggacaat
caggttcctgaggttttcaccaacaccctgcgagtggttgagggcggtcactgcaccatc
agcacggagcacattttggtttctgatgtggacaccccactggacagcatctgcctctct
cttcaggagatgcctctgcacggcggggtagagctggatggatttcctctaaatccaaga
ggcacattttcttggcaagacctctgtaccttaaaagttaggtatcagcacgatggatct
gaggttcttcaggatgaggtattcctggaggtcacagatggcaccaattcagcacaattt
agtctccacattgaggtattccctgtgaatgatgagccacctgttctgaaggctgacctc
atccccatgatgcactgctcagagggtggagaggtgactatcacccctgaatacatttcc
gctactgatgcagacagcaatgacttggaactgctgtttatgattgcccgagagcctcag
tgtggagtggtgagaaaggctggactctacgtggacaggttctctcagggagatgtcatc
tcagggactgtgacatacaaacatacaggtggtgagatgggccttgaaccttgttttgac
actgttgtattggtggtttcggatggcgaagctgaccctttggtgaatggctgttgttac
gatggacccgattcgtccgttactcttcacaagtcctttcccacataccagctcaacatc
acagtgcatccagtcgacaaccagccaccttcagttataataggtgagatgttcacagtg
gatgaaggcttctcagcagccattactactcatcacttgactgtcactgaccgggacact
gccccggatgacttagaattcatattggcttctcatccccagttcggctacctagaaaac
acgctgccttctgcaggctttgagaaaagcaatatgggcataaccatagcctcattccag
tggacagacatcaaggcttcacacattaactatgtgcagtccaggcacgtgagggtggaa
ccaactgccgaccagttcatggtatatgccacagacgggaagcgacgctccttggagaca
acatttcgtgtcatcatcaaccccataaatgatgaagcccctgaccttgtggtacagaat
atcactgtgtacgagggtcacgtgatggagctggattcttccatcatcagtgcggctgac
cgggatgttcctgaggaccccctgttctgcagcatcgctcgcaagccccagcatggcctc
ctcatcgatgcggccggcagcgaggactctcctcaggtcaagcagctggaacatgagatt
cataacttctccgtggaccttcttaagaacggaatgaagctggcctacgcccatgacgac
tcagagagttctgctgataactttgtgatccagttgtcagatgggaaacataaaatcctt
aaaaccatctcagtaaacatcaccccagtgaatgatgagacaccaacactaagcaagaag
gctgaaatctcaatgactgtgggcgatactcgcattctgtctagcgctgttctttcagcc
atagataaagactcacccagggagaagattcactatttatttgaaagacttccccaaaat
ggacagcttcaacttaagatagggagggactgggtccctgtctccgatggcatgcagtgc
acccaggaggatgtggacctgaacttgctaagatacacgcatgctggtaaaacggattcc
caagacggagacagcttcaccttctacctctgggatgaggacaacaggtcacctgcattt
gtctgtcacatcatcattgaagacacgggcaaaggtgatattgtcattcatgctaaacca
ctcgtggtagtcaaaggtgacagaggtctcttgacaactgccactcttctggctgtggat
ggggcagacaagcctgaggaattgctctacctcatcacatcgccaccacagtatggccag
gtggagtccgtccactatcctggagtccccattaccagctttagccaaatggacatagca
ggacagacagtctgctacatacacaagagcaggacggctgtgcccagtgacagcttcaga
tttaccatcagcaatggcctgcagacgcagcacggggtgtttgagatcacactgcagact
gtggacagcgccttgcctgtgctgaccaagaacgagaggctgaggctggcccaaggcgcc
acgggcctactgtccacggatcaccttcagctgaccgacccggacacacctccagagaac
ctcactttctttctggctcagctcccacgtcacgggttcctctacctgagggggaaagtg
cttcaacacaatttcacccagcgtgatgtggacagcaggggcgtggcctaccggcactca
ggaggcagcgcccaggaggactgtttcactttcctagccacagacagggacagccaaggt
tttgttgtggatgggaaagttcagaaggagcccgttcgcttcactatccaggtggaccgg
ctggacaaggcagcgccccggatcacacgattgcactccccatctcaagtgacactcttg
aaaaacggctgctatgggatttacataacatcccatgtgctgaaggcatcggaccctggc
acagaggatgaccaaatcatctttaagatcttacgaggcccattgcatggacgtctggag
aacacaacaacaggtgaattcatccatgagcgatttagccagaaggacttaagccgtaag
accatcctttacgttataaacccttctttgaaagtgaattcagatatcctggaacttcag
gtcatggaccccacagggaacactgccagtccccagagcttggagctgaagtggtcttat
attgaatggtcccagactgaatatgaggtctgtgagaatgtgggcttattgcccttggaa
gttaccagaaggggatattccctggactcagcctttgtgggtatagaggttaaccaagtg
tcagctctagttggaaaagattttactgtcactccatccaaactgcttcaatttgaccca
ggaatgtcaactaagatgtggaatatagcaattacctatgacggattagaggaagatgat
gaggtctttgaagtaattctgaactcccctgtgaatgcggttcttggcacacagacaaaa
gcagcagtgaaaattttggactcaaaaggaggacggtgccatccttcaaattccttcaac
caaaacaagcacagcacgtgggggaagggccgttggcatccgctgccctcaggatcatcc
tcactcaccacttcggggtctcctcatctggaaagaaggcctcctccggctttcaccaaa
ggagatgctcttcagggttttggtctcacagacctctctcaaaggaagatgaaggcccag
gggaatggcagatcagttctcccatcttctgtttgtacaaatggaacagacaccatctac
aattaccatggtatagtttccttgaaactagaggaggacagattctcagctcacaaacgg
aaggccaaaatatccattgttagtcagccacagaggacaatcaaggtggcagagctgcct
gtagctgacaaggtggagtccgcaactgactcgcactttctcaggcagggtctgcggccc
ttgtttccaaagaactgttctgtggaattaaagggactctttcattttgaagaaagcacc
caccgattgtatcaatgtgatgggatctcctggaaagcctggagcccccaaaccaagggg
ctggaggacagatcctgcccagttggatggctgcttcattcgggctactgtcacatcttg
gtcacaagacagaaagccacctggaccacagctacccgagcttgcagagaacagcaccgg
ggagaccttgtgaccgtattctccaggcggcacatgcagtggctatgggctgtcagtgga
agaaagcccttctggataggcttgaggaaccaagtgcgaactggccgctgggagtggatt
ggaggtgaacctgctgctttcaccaactggaagaaagggccccctcggcaccccaaacct
gggaagaactgtgttttggttcagaagaggggactatggcagtcaaagaactgtaacaaa
ggcaaggctcacaattttgtgtgctcaaggaaactctga
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integrated database retrieval system
