Apodemus sylvaticus (European woodmouse): 127681056
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Entry
127681056 CDS
T10613
Symbol
Prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127681056 (Prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asyl03041
]
127681056 (Prpf38a)
Spliceosome [BR:
asyl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
127681056 (Prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
127681056 (Prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
127681056
NCBI-ProteinID:
XP_052032925
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All DBs
Position
3:complement(123934982..123948441)
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AA seq
312 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFVLMHVDEFIYELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPALRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacagtgaaggatgcccacagcatccatggcaccaaccctcagtatctg
gtggagaagatcatccggacgcgaatctatgaatcaaagtactggaaagaagagtgtttt
ggacttacagctgaacttgtagtcgacaaagccatggaattaaagttcgtgggtggtgtg
tatggtggaaacataaagccaactccttttttgtgtttaaccttgaagatgctccaaatt
caacctgagaaggatatcattgttgagttcataaaaaatgaagatttcaagtatgtccgg
atgttgggggcactttacatgaggctgacaggaactgcaattgactgctacaagtacttg
gagcctttatacaatgactatcgaaaaatcaagagccagaaccgaaatggagagtttgta
ctgatgcatgtagatgaattcatttatgaactactgcacagtgagagagtctgtgatatc
attttgccccggctacagaaacggtacgtgctggaagaagcggagcagctggagcctcga
gttagtgctctagaagaggacatggatgacgtggagtccagtgaggaagaggaagaggaa
gatgagaagctggaaagagtgccatctcctgaccacagacgaagaagctaccgagacttg
gacaagccaaggcgctcgcctgcactgcgctacaggaggagccgaagtcgctctcccagg
aggcggagtagatcccctaaaagaagaagtccttctccccgacgagaaaggcataggagc
aagagtccaagacgccatcgaagcaggtccagagacagacggcacagatcccgctctaaa
tccccaggtcaccaccgtagtcacagacatagaagccactcaaaatctcctgaaaggtct
aagaaaagccacaagaagagcaggagaggaaatgagtaa
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