Apodemus sylvaticus (European woodmouse): 127681296
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Entry
127681296 CDS
T10613
Symbol
Sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asyl01009
]
127681296 (Sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asyl03021
]
127681296 (Sfpq)
03041 Spliceosome [BR:
asyl03041
]
127681296 (Sfpq)
Protein phosphatases and associated proteins [BR:
asyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127681296 (Sfpq)
Transcription machinery [BR:
asyl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127681296 (Sfpq)
Spliceosome [BR:
asyl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127681296 (Sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
127681296
NCBI-ProteinID:
XP_052033351
LinkDB
All DBs
Position
3:140712622..140727639
Genome browser
AA seq
699 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGGPKPPLPP
PPPHQQQQQPPPQQPPPQQPPPHQQPPPHQPPHQQPPPPPQESKPVVPQGPGSAPGVSTA
PPPAVSAPPANPPTTGAPPGPGPTPTPPPAVPSTASGPPPTSTPSSGVSTTPPQTGGPPP
PPSGGAGPGPKPGPGPGGPKGGKMPGGPKPGGGPGMGAPGGHPKPPHRGGGEPRGGRQHH
APYHQQHHQGPPPGGPGPRTEEKISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADI
TEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFAT
HAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKAF
ERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTFEY
EYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRR
MEELHSQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRMGYMDPRER
DMRMGGGGTMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGSDMRTERFG
QGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatcggttccgaagtcgtggtggtggcggtggaggatttcatcggcgtgga
ggaggcggtggccgcggcggcctccacgacttccgttctccgccgcctggcatgggcctc
aaccagaatcgcggccccatgggcccgggccctggcggcccgaagccaccgctcccgcct
ccacctccgcaccagcagcagcagcaacctccgccgcagcagcccccgccgcagcaaccc
ccgccgcaccagcagccgccgccacaccagccgccccatcaacagcccccgcctccgccg
caggaatcgaagcctgtcgtcccccaaggccctggctccgctcccggagtgagcactgcg
ccgcctccggcggtctccgctccgcccgccaatcccccgaccaccggcgccccgccgggc
ccgggtcctaccccgactccgccgcccgccgtaccctccactgcctccggaccgcctccc
acttcgacgccgagcagcggagtctcaaccacccccccacagaccggtggccctccgccc
ccgccttccggaggcgctggtccgggacctaaaccagggccaggtcctggcggtcccaaa
ggcggtaagatgcccggtgggcctaagcctggaggtggcccgggcatgggcgctcctggt
ggccatccgaagccaccacacagaggtggcggggaaccccgtgggggccggcagcaccac
gcgccctaccaccagcagcaccaccaggggccccctcccggaggaccgggacctcgcaca
gaggaaaagatatccgactcggagggatttaaagccaacttgtctctcttgcggaggcct
ggagaaaaaacttacacacagcgctgtcggttgtttgtggggaacctacctgctgatatc
acagaggatgaattcaaaagactgtttgctaaatacggagaacccggagaagtttttatc
aacaaaggcaaagggttcgggtttattaagcttgaatctagagctttggctgaaatcgcc
aaagctgaattggatgatacccccatgagaggtagacagcttcgggttcggtttgccaca
cacgctgcagccttatctgttcggaatctctctccttatgtttccaatgaacttttggag
gaggcttttagccagtttggtcctattgaaagggctgttgtaattgtggatgatcgcgga
agatctacagggaaaggcattgttgaatttgcttccaagccagcagcaagaaaagcattt
gaaagatgcagtgaaggtgttttcctactgacaacgactcctcgcccagtcattgtggaa
ccacttgaacagttagatgatgaagatggtcttcctgaaaaactggcccagaagaatcca
atgtatcaaaaggagagagaaacaccacctcgctttgctcagcatggcacatttgaatat
gaatattctcaacgatggaagtccttggatgaaatggaaaaacagcaaagggaacaagtt
gaaaaaaacatgaaggatgcaaaagacaaattggaaagtgaaatggaggatgcgtaccat
gaacaccaagcaaatcttttgcgccaagatctgatgagacgccaggaagaattaaggcgc
atggaggagcttcacagtcaagaaatgcagaaacgcaaggaaatgcagttgaggcaagag
gaggaacgacgtagaagagaggaagagatgatgattcgccaacgtgagatggaagaacaa
atgagacgccaacgagaagaaagttacagcaggatgggctacatggatccaagagaaaga
gacatgagaatgggtggtggtggaacaatgaacatgggagatccctatggttcaggaggc
cagaaatttccaccactaggtggtggtggtggcataggttatgaagctaatcctggagtt
ccaccagcaaccatgagtggttccatgatgggaagcgacatgcgtactgagcgctttggg
cagggaggtgcgggtcctgtgggtggacagggtcctagaggaatgggacctggaactcca
gcaggatatggtagagggagagaagagtatgaagggccaaataaaaaaccccgattttag
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