KEGG   Apodemus sylvaticus (European woodmouse): 127681329
Entry
127681329         CDS       T10613                                 
Symbol
Rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl03082  ATP-dependent chromatin remodeling
asyl03083  Polycomb repressive complex
asyl04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127681329 (Rbbp4)
   03083 Polycomb repressive complex
    127681329 (Rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    127681329 (Rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:asyl03036]
    127681329 (Rbbp4)
Chromosome and associated proteins [BR:asyl03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     127681329 (Rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     127681329 (Rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     127681329 (Rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     127681329 (Rbbp4)
    PRC2.2
     127681329 (Rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     127681329 (Rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127681329 (Rbbp4)
  Chromatin remodeling factors
   NuRD complex
    127681329 (Rbbp4)
   NuRF complex
    127681329 (Rbbp4)
   NuRF complex (fruit fly)
    127681329 (Rbbp4)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 CAF1C_H4-bd WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st DSE1_N Beta-prop_Aladin WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR3_2nd Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_RIG_1st eIF2A ASA1 MIOS_WD40 PAC11 CFAP251_N Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 127681329
NCBI-ProteinID: XP_052033415
LinkDB
Position
3:complement(142994788..143017398)
AA seq 425 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggctgacaaggaagccgcctttgacgacgcggtggaagaacgtgtgatcaacgaggag
tacaaaatatggaagaagaacacgccttttctttatgatttggtgatgacccatgccctg
gagtggcccagcttaactgcccagtggcttccagatgtgaccaggcccgaggggaaagat
ttcagcattcatcggcttgtcctgggaacacacacatctgatgaacagaaccacctggtg
atagccagtgtccagctccccaatgatgatgctcagtttgatgcatcccattatgacagt
gagaaaggagaatttggaggttttggttctgtcagtgggaaaattgaaatagaaatcaag
atcaaccatgaaggagaagtaaacagggcccggtacatgcctcagaacccttgcatcatc
gcaacgaagacgccatccagcgatgtgcttgtttttgactacacaaagcacccttctaaa
ccagacccttctggagaatgcaacccagatttacgtctccgtggacatcagaaggaaggt
tatgggctttcttggaatccaaatctcagcggtcacttacttagtgcttcagatgaccat
accatctgcctgtgggacatcagtgcagttccaaaagaaggaaaagtagtggatgcaaag
accatctttacggggcatacagcagtagtagaggacgtttcctggcatctgctccatgaa
tctctgtttgggtcagttgctgatgaccagaaacttatgatttgggatactcgttcaaac
aatacttcaaagccaagccactcggtggatgcccacacagctgaggtgaattgcttgtcc
ttcaatccctacagtgagttcattcttgccacaggatcagctgacaagactgttgccttg
tgggatctgagaaatctgaaactcaagttgcattcctttgaatcacataaggatgaaata
ttccaagttcagtggtcacctcacaatgagactatcttagcttccagtggtactgatcgt
aggctgaatgtctgggatctgagtaaaattggagaagaacagtccccagaagatgcagaa
gatggcccaccagagttgttgtttattcatggtggtcacactgccaagatatctgacttt
tcctggaatcccaatgaaccttgggtgatttgttctgtatcagaagacaatatcatgcaa
gtgtggcagatggcagagaacatttataatgatgaagaccctgaaggaagtgtggatcca
gaaggacaaggatcctag

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