Apodemus sylvaticus (European woodmouse): 127681361
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Entry
127681361 CDS
T10613
Symbol
Pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
127681361 (Pum1)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
127681361
NCBI-ProteinID:
XP_052033477
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Position
3:144178084..144296361
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AA seq
1210 aa
AA seq
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MKVWSPASGKKLKGVGGMSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTG
SQAQPQPAANQALAAGTHSSPVPGSIGAAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGY
NTSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGP
KGIFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVE
YVLSSSPGDSCLRKGGFGPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLP
VQNGIDADVKDFSRTPGNCQSSANEVDLLGPNQNGSEGLAQLTSTSGAKPVEDFSNMESQ
SVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQ
QQQYALAAAHQPHIGMFPAGLAPAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPH
QYYGVTPWGVYPASLFQQQAAAAAAATNSATQQSAPQAQQGQQQVLRGGASQRPLTPNQN
QQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAP
VRLVAPAPVIISSSAAQAAVAAAAASANGAASGLAGTTNGPFRPLGTQQPQPQPQQQPTN
NLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVAN
SNTGSGSRRDSLTGSSDLYKRTSSSLAPIGHSFYSSLSYSSSPGPVGMPLPSQGPGHSQT
PPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASGASSLFSPSSTLFPSSRLR
YGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAER
QLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVI
QKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQ
VFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPE
DKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMM
KDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLG
PICGPPNGII
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatggagcccagcgtctggtaagaagctgaaaggtgttggtggaatgagcgtt
gcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccccacctgaaa
catcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatctggaacaggg
tcgcaagcgcagccacagccagctgcaaatcaggctcttgcagctgggacacactccagc
cctgtcccaggatccataggagctgcaggccgttcccaggacgacgctatggtggactac
ttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggtggaggcggctat
aatactagcaaacatcgatggcctacaggggataacattcatgcagaacaccaggtacgc
tctatggatgaattaaatcatgattttcaagcgcttgctctggaagggagagctatgggc
gagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaagatggacca
aaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatcagatcattca
gtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtgaacagtgag
gtcaattctgtactgtccccacgatcggagagtgggggactaggcgttagcatggtggag
tatgtattgagctcatccccgggcgattcctgtctaagaaaaggaggatttggcccaagg
gatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacgtttgatgga
gataagctaggagatttgaaggaggagggagatgtgatggacaagaccaatggtttgcca
gtgcagaatgggattgatgcagacgtcaaagattttagccgtacccctggtaattgccag
agctctgctaatgaagtggatcttctgggtccaaaccagaatggttctgagggcttagcc
cagctgaccagcaccagtggtgccaagcctgtggaggatttctccaacatggagtcccag
agtgtccccttggaccccatggaacatgtgggcatggagcctctgcagtttgattactca
ggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgactacaattct
caacaacagctattccaaagacccaatgcacttgctgttcagcagttgacagctgcccag
cagcagcagtatgcgcttgcggcagcccaccagcctcacatcggtatgtttccagcaggt
ttagctcccgctgcgtttgtccccaacccatacatcatcagcgctgctcccccagggacg
gacccctacacagctggactggctgcagcagcgacactcggcccagctgtggtccctcac
caatattatggagtcacgccatggggtgtctaccctgctagtcttttccagcagcaagct
gctgcagctgcagcagcaacaaactctgctactcagcagagtgctccgcaggcccagcag
ggacagcagcaggttcttcgtggaggagctagccagcgtcctttgaccccaaatcagaac
cagcagggacagcaaacagatccccttgtagcagctgccgcagttaattctgctcttgcc
tttggacagggattggctgcgggtatgccaggttatccagtcttggcacccgctgcttac
tatgaccaaactggtgcccttgtggtgaatgcaggggcaagaaatggccttggagctccg
gttcggcttgttgctccagccccagtcatcatcagctcctcagctgcacaagcagctgtt
gcagcggctgcagcttcagcaaacggagcagccagtggtcttgctggaactacaaatgga
ccatttcgacctttaggcacccagcagccccagccccagcctcagcagcagcccactaac
aatctggcttccagttctttctatggcaacaactctctgagcagtaactcccagagcagc
tccctcttctctcagggctctgcccagcctgccaacacgtccttgggatttggaagcagc
agttcccttggtgccacactgggatcagcccttggagggtttggaacagcagttgcaaac
tccaacactggcagtggctcccgccgtgactccctgactggcagcagtgacctttataag
aggacatcgagcagcttggcccccattggacacagtttttatagcagccttagctattcc
tcctctcctggacccgtgggcatgcctctccctagtcagggaccaggacattcacagaca
ccacctccttccctctcttcacatggatcctcttcaagcttaaacctgggaggactcacg
aacggcagtggaagatacatctctgctgctcctggcgctgaagccaagtaccgcagtgcg
agtggcgcctccagccttttcagccccagcagcaccctttttccttcctctcgtttgaga
tatggaatgtctgatgttatgccctctggcaggagcagacttctggaagatttccgaaac
aaccggtaccctaatttacagctgcgggagattgctgggcatataatggaattttcccaa
gaccagcatggttctagattcattcagctgaaactagagcgtgccacagcagctgagcgc
cagcttgtcttcaacgaaatcctccaggctgcataccaacttatggtggatgtgtttgga
aattacgtcattcagaaattctttgaatttggcagccatgaacagaagcttgctttggca
gaacggattcgaggccacgtcctatcattggcgctgcagatgtatggctgccgagtcatc
cagaaagctttggaatttattccctctgaccagcaggtaattaacgagatggtgcgggag
ctagatggccatgtcctgaagtgtgtgaaagaccagaacggcaaccatgtggttcagaag
tgcattgaatgtgtacagccccagtctttgcagtttatcattgatgcattcaaggggcag
gtgtttgctttgtctacgcacccttatggctgtagggtgatccagaggatcctagagcac
tgtctccctgatcaaaccctgcctatcctcgaggagctccaccagcacacagagcagctt
gtgcaggatcagtatggaaattatgtaatccaacatgtgctggagcatggtcgtcctgag
gataaaagcaaaattgtagcagagatccgaggcaatgtacttgtattgagtcagcacaag
tttgcaagcaatgttgtggagaagtgtgtcactcacgcctcacgtacagagcgtgctgtg
ctcattgatgaggtatgcaccatgaacgacggtccccacagtgccttatacaccatgatg
aaggatcagtatgctaactacgtggtccagaagatgattgatgtggctgagccagggcag
cggaagattgtcatgcacaagatccggccacacattgcgacgctgcggaagtacacctat
ggcaagcacatcctggccaagctggagaagtactacatgaagaacggcgtggacttgggg
cccatttgtggtcccccgaatggcatcatctga
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integrated database retrieval system
