Apodemus sylvaticus (European woodmouse): 127681409
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Entry
127681409 CDS
T10613
Symbol
Wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
asyl
Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127681409 (Wdtc1)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127681409 (Wdtc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
TPR_19
Beta-prop_NOL10_N
DSE1_N
TPR_2
TPR_17
TPR_1
ANAPC4_WD40
WD40_RFWD3
TPR_11
PAC11
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_Aladin
ANAPC3
TPR_16
TPR_14
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
TPR_6
ASA1
TPR_BSK1_C
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_VPS8
CFAP70_TPR_C
Barstar
Motif
Other DBs
NCBI-GeneID:
127681409
NCBI-ProteinID:
XP_052033587
LinkDB
All DBs
Position
3:complement(146825219..146867695)
Genome browser
AA seq
675 aa
AA seq
DB search
MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGPMVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQK
PLPDGAAQYYVAGHLPVKLPDYNSRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYK
QRPYTFLLPRKCHSVEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESKGCVSPQVELPPY
LERVKQQANEAFACQQWTQAIQLYSKAVQKAPHNAMLYGNRAAAYMKRKWDGDHYDALRD
CLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDITA
ALFSKSDGEEKKAAGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTTTDIKE
ANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDP
VVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNANPLEAMLLDMGYRITGLSSGGAGAS
DDEDSAEGQVQCRPS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtcaacataactagagacctcatccgtaggcaaatcaaggagcggggtgcc
ctgagctttgaacggcgatatcatgtcactgacccctttatccggaggctgggcctggaa
gcagaacttcagggtcactcaggatgtgtcaactgtctggagtggaatgagaaaggagac
ttgctggcttctggttctgatgaccagcacaccatcgtgtgggacccactgcatcacaag
aagctgctctccatgcacacgggacacacagcaaatatcttctctgtcaagttcctgcct
catgctggagaccgcatcttgatcacgggggcagctgactccaaggtgcatgtccatgac
cttacggtgaaggagacgatccacatgtttggagaccatacaaaccgggtgaagcgcatt
gccacggcccccatgtggcctaacaccttctggagcgctgctgaggatgggcttatccgc
cagtatgaccttcgggagaacagcaaacactcagaggtgctgatcgacctaacagagtac
tgtggcccaatggtggaggccaagtgcctcaccgtcaacccccaggacaataactgcctg
gcagtaggggccagcgggcccttcgtgaggctgtacgacattcggatgatccacaaccac
agaaagagcatgaagcagagcccttcggcaggtgtgcacaccttctgtgaccggcagaag
ccccttccggatggtgcggcacagtattatgttgcaggtcacctgccggtgaagctgcct
gactataacagccgtctgagagtgctggttgccacctatgttaccttcagccccaatggc
acggagctgctcgtcaacatgggaggagagcaggtctatctgtttgacttgacttacaag
cagcggccatataccttcctcttgcctcgaaaatgccactcagtggaagtccagaatggc
aagatgtctactaacggtgtgtccaacggcgtgtcaaatggcctacaccttcacagcaac
ggcttccggcttccagaaagcaaggggtgtgtcagcccccaggtggagctacccccatac
ctggagcgcgtgaagcagcaagccaatgaagccttcgcctgccagcagtggacccaggcc
atccagctctacagcaaggctgtgcagaaggcccctcacaatgcgatgctctatggaaac
cgagctgctgcctacatgaagcgcaagtgggatggcgaccactatgatgccctccgggac
tgcctcaaggccatctccctaaacccttgccacctgaaggcacacttccgtctggcccgg
tgcctctttgaactgaagtatgtggctgaagctctggagtgcctggatgacttcaaaggg
aagttcccagagcaggcccacagcagtgcttgtgatgcactgggccgggacatcacagct
gcccttttctccaaaagtgatggtgaggagaagaaggcagctggtggtggtccagttcgc
cttcgaagcacaagtcgcaaggactccatctcagaagacgaaatggtgctacgggaacgg
agctacgactatcagttccgctactgtggtcactgcaacaccaccacagatatcaaagag
gcgaatttctttggcagcaatgctcagtacatcgtcagcggctctgatgatggctccttc
ttcatctgggaaaaggagaccaccaacctcgtccgagtgctccagggggatgagtccatt
gtcaactgcttgcagccgcaccccagctactgcttcctggccaccagtggcatcgaccct
gtcgtgcgactgtggaacccacgaccagagagtgaagacctcacaggccgagttgtggag
gatatggagggtgcctctcaggccaaccagcggcgcatgaatgccaatcccttggaggcg
atgctgctggacatgggctaccggatcacaggcctgagcagcgggggcgctggggcctct
gatgacgaggacagcgcagagggccaggtgcagtgccggcccagctag
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