Apodemus sylvaticus (European woodmouse): 127681550
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Entry
127681550 CDS
T10613
Symbol
Crocc
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asyl03037
]
127681550 (Crocc)
Cilium and associated proteins [BR:
asyl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127681550 (Crocc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CCDC39
PUMA_CC
YjbQ
Motif
Other DBs
NCBI-GeneID:
127681550
NCBI-ProteinID:
XP_052033873
LinkDB
All DBs
Position
3:complement(154579362..154617320)
Genome browser
AA seq
1934 aa
AA seq
DB search
MASLLSLQEENQLLQQELSRVEDQLAQSRAERDELAIKYNAVSERLEQAVRLETGELEAQ
EPRGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQAKILQYKKQCSELEK
QLLDRSTELEQQRLRDTEHSQDLDSALVRLEEEQQRSASLAQVNAMLREQLDQANSANQA
LSEDIRRVTSDWTRSCKELEQREATWRREEESFNAYFSSEHSRLLLLWRRVMGLRRLASE
VKMGTERDLLQLGGELVRTSRAVQEVGLGLSASLQRAESRAEAALEKQKLLQAQLEEQLQ
AKLLREKDLAQLQVQSDLDKAHLSARVTELALSVERLQSQNTEKDQLNRTLSDKLEALES
LRLQEQTTLDTEDGEGLQQTLRDLAQAALSDTESGVQLSSSERTADTSDGSLRGLSGQRT
PTPPRHSSPGRGRSPRRGLSPACSDSSTLTLIHSALHRRQLQVQDMRGRYEASQDLLGSV
RKQLSDCEGERRGLEEQLQRLRDQTAATAQAQEDAQREAQRLRSANELLSREKGNLTHSL
QVTQQQVEELRQELEKLQAAQEELRRQHTQLEDEQEDSVQEGARARRELERSQRQLEELA
VKRSGLTRELVEVREALSCATLQRDVLQTEKAEVTEALTKAEAGRAQLELSMTKLRAEEA
SLRDALSKMSALNESLAQDKLELNRLVAQLEEEKAALLGRQQQAEHATTLAVEKQEQLEQ
LRLEQEVEKQGLEGSLCVAEQAREALEQQLLVLRGERSHLQEQLAQLSRQLNGRDQELEQ
ALRESQRQVEALERAAREKEAMAKERAGLAVQLAAAEREGRTLSEEAIRLRLEKEALESS
LCDVQRQLAQQEARREQLEADSQALLLAKETLTGELAGLRQQVTATEEKAALDKELMAQK
LVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELQAERAQLQGQLQQEREELLARME
AEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEM
ERQKRDAQSRQEQDRNTLNALTSELRDLRSQLEEATAAHAQKVKELQEQTGILGRQREAC
MREAEELRTQLRLVEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGTKER
EALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVE
RSRLEARRELQELRRQMKTLDSDNGRLVRELADLQGRLALGERTEKESRREVLGLRQKLL
KGESGLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEARCAEKKLLDSARNLELRLE
AVRTETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSALRRGLGLGRVSSS
PAREAPAGGSGDGLSSPSPLEYSPRSQPPSPGFPASPAPPDLDPEAVRDALRDFLQELRS
AQRERDELKVHTSTLTQQLAEVEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAE
LALQEESVRRSRRECRATLDQMAVLERSLQAAESELRASQEKVSKMKATEAKLESDKRRL
KEVLDASESRAVKLELQRRALEGELQRSRLGLGDREAHAQALQDQVDSLQRQVADSEVKA
GTLQLTVERLSAALAKAEEGEGTLRGKVQSLTDALAQSSASLSSTQDKNLHLQKALSTCE
HDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGDAEGQLQQLQQVLR
QRQEGEAMALRSVQKLQEERRLLQERLGSLQRALAQLEAEKRELERSALQLDKDRVALRK
TLDKVEREKLRSREDTLRLNAEKGRLDRTLTGAELDLAEAQQQIQHLEVVEALEGNHSLV
QPEAEEQQQELQQEVERLRSAQLQTERTLEARERAHRQRVSGLEEQVSTLKAQLQQELRR
SSASASLPAGTPEK
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atggcctcattgctgtcgctgcaggaggaaaaccagctgctgcagcaggagctgtcgcgc
gtggaggaccagctggcccagagccgcgcagagcgggatgaactcgccatcaagtacaac
gccgtcagcgagaggctggagcaggctgtgcggctggagactggggagctggaggcccag
gagcccagggggctggtgcggcagagcgtggagctgcggaggcagctgcaggaggagcag
gcctcctaccggcgcaagctgcaggcctaccaggagggccagcagcggcaggcccagcta
gtgcagcggctgcaggccaagatcctgcagtacaagaagcagtgctcagagctggagaag
cagctgctggacaggtccaccgagctggagcagcagcgactgagggacacagaacacagc
caggacctggacagtgcgcttgtgcgtctggaggaggaacagcagagaagtgccagcctg
gcccaggtgaatgccatgctgcgagagcagctggaccaggcaaactcggccaaccaggct
ctgagcgaggacatccgcagggtgaccagtgactggacccgcagctgtaaggagctggag
cagagggaggcgacgtggaggcgggaggaggagtccttcaacgcctacttcagcagcgag
cacagccgcctgctcctcctctggaggcgggtcatggggctccgacggctggccagcgag
gtgaagatgggcacggagagggacctactgcagctgggaggggaactagtccggacatcc
cgggccgtccaggaggtgggcctggggctgagcgccagcctgcagcgggccgagagcagg
gctgaggcggctctggagaagcagaagctgctgcaggcccaactggaggagcagctgcag
gccaagctgctccgggagaaagacctggcccagctgcaggtgcagagtgacctggacaag
gcccatctcagtgccagagtgacagagctggccctgtctgtggagcgccttcagagccag
aacacagagaaggaccagctcaacaggaccctctctgacaagttagaggccctggagtcc
ctgcggctccaggaacagacgaccctggacactgaggatggagaggggctgcagcagacc
ctgagggacctggcacaggctgccctatccgacactgagagcggtgtccagctcagcagc
tcagagcgcactgcggacacctctgatggcagcctgcgcgggctctctggccagcggacc
ccgactccgccgcggcattcctccccgggtcgaggtcgttctccgcgccgaggcctgtcc
ccagcctgctctgactcctccacactcactctgatccactctgccctgcacaggcgccaa
ctacaggtccaggacatgcgtgggcgctatgaagccagccaagacctgctggggtccgta
cgcaagcagctcagtgactgtgagggcgagcggcgtggcctagaggagcagctacagcgc
ctgcgggaccagacagcagccacagcccaggcccaggaggatgcacagcgcgaggcccag
cgcctacgcagtgccaacgagctcctgagcagggagaagggcaacctgacccacagcctg
caggtgacgcagcagcaggtcgaggagctgcgccaggagctggaaaagctgcaggctgcg
caggaggagctgaggcggcagcacacccagctggaggacgagcaggaggactcggtgcag
gagggcgcgcgggcccgccgagagctggagcgcagccagaggcagctggaggagctggca
gtgaagcgctcggggctgaccagggagctggtggaggtgcgggaggcactgagctgcgcc
acactgcagagggacgtgctgcagacagagaaggcagaggtgaccgaggcgctgaccaag
gctgaggctggccgcgcacagctggagctctccatgaccaagctgagggcagaggaggcc
tccctgcgagacgccttgtccaagatgagcgcgctcaacgagagtctcgcccaggacaag
ctggaactaaaccgccttgtcgcccagctagaggaagaaaaggcggcactcctgggccgc
cagcagcaggcagagcacgccactacactggctgtggagaagcaggaacagttggagcag
ctgaggctggagcaggaggtggagaagcagggcctggagggctccttgtgtgtggctgag
caggcccgggaggcgctggagcagcagctccttgtactgcgcggtgaacgcagccatctg
caggagcagctggcccagctctcccggcagctgaacggacgggaccaggagctggagcag
gccctgcgggagtcacagcggcaggtggaggccctggagcgcgctgcccgggagaaggag
gccatggccaaggagcgggctggcctggccgtgcagctggcggcagcagagcgcgagggc
cggaccctgtcagaggaggccattcgcctgcgcctggagaaggaggccctggagagcagc
ctgtgtgacgtgcagaggcagctggctcagcaggaggcccgccgggagcagctcgaagcc
gacagtcaggccctgctgctggccaaggaaaccctgactggggagctggcaggcctgcgg
cagcaggtaacagccactgaggagaaggcggccttggacaaggagctgatggcccagaag
ctggtgcaagcggagcgggaggcacaggcgtctctgcgggagcagcgggcggcccatgag
gaggatcttcagaggctccagcgggagaaggaggctgcgtggcgggagcttcaggcagag
cgtgcccagctgcagggccagctgcagcaggagcgggaggagctgctggcgcggatggag
gccgagaaggaggagctgagtgaggagatcgccgcgctgcagcaggagcgcgacgagggc
ctgctcctggcggagagtgagaagcagcaggccttgtccctgaaggagtctgagaagacg
gccctgtcagagaagttgatgggaacccggcacagtctggccgccatctctctggaaatg
gagcgacagaagcgagatgcccagagccggcaggaacaggaccggaacacactgaacgcc
ctgacatctgaacttcgagacctccggtctcaactggaggaagccactgcagcccatgcc
cagaaggtgaaagaactccaggagcagaccggcatcctgggccggcagcgggaggcctgc
atgcgtgaggcggaagagctgaggactcagctgcgcttggtggaggacacccgggacgga
ctgcggcgcgagctgctggaggcccagcgcaagggtcgggacagccaggacagctccgag
gcccaccggcaggaggccagtgagctgcggcgcagcctgagcgagggcaccaaggagcgc
gaggccctgcggcgctccaacgaggagctgaggtctgctgtgaagaaggccgagagcgag
cgcatcagcctgaaacttgccaatgaggacaaggagcagaagctggccctcctggaagag
gctcgcgtgtcggtagccaaggaggctggggagctgcgggcctcgctgcaggaggtggag
cgatcgcggctggaggctcgacgggagctgcaggagctcaggcgacagatgaagacactg
gacagtgacaatggcaggctggtccgggagctggcagacctgcagggccgcttggccctg
ggcgagcgcacagaaaaggagagccggcgagaggtcctgggcctgaggcagaagttactg
aaaggggagagcggcttggaggccctgaagcaggagctgcagggttcccagaggaagctg
caggagcaagaggccgagttccgggcgcgtgagcgaggcctgttgggctccctggaggag
gcgcgctgtgctgagaagaagcttctggactctgctcgcaacctggagctgaggctggag
gcggtgcggaccgagacctcggagctggggctgcggctgagcgcagccgagggccgggcg
cagggcctggaggtcgagcttgcccgcgtggaggcgcagcggcgggtggccgaggcccag
ctgggtggcctgcgctccgccctgcgccggggtctgggcctgggccgagtgtccagctcc
ccggctagggaggcgcctgcaggaggaagcggggatggtctcagcagccccagtcctttg
gaatatagccctcggtcccagcccccatctccagggttccctgcctcccctgcacctcct
gacttggacccagaagctgtgcgcgatgccctcagagacttcctgcaagagctgcggagt
gcccagagggagcgggatgaacttaaggtgcacaccagcaccctgactcaacagctggcc
gaggtggaggccgagagagaccacgcggcctccagggccaagcagctgcagaaggccgta
gccgagagcgaggaagcctggcgcagtgcagacaggcggctgagtggagcccaggcagag
ctggccctgcaggaagagagcgtgcggcgcagcaggcgggagtgcagggccacgctggac
cagatggcagtgctggagcggagcctgcaggccgccgagagcgagctccgggccagccag
gagaaagtcagcaagatgaaggccaccgaggcgaagctggaaagcgacaagcggcggctg
aaggaggtgctagacgcctccgagagccgcgccgtcaagctggagctgcagcggcgcgca
ctcgagggcgaactgcagcgcagccgcctcggcctgggcgaccgcgaggcccacgctcag
gccctccaggaccaagtggactccctgcagagacaggtggcagacagcgaggtgaaggcg
gggaccttacagctcacagtggagcggctcagtgcggcactggccaaggcggaggagggc
gaggggaccctgcggggcaaggtgcagagcctgacagatgccctggcccagagcagcgcc
agcctcagcagcactcaggacaagaatctgcacctccagaaggctttgagtacctgcgaa
cacgaccgtcaagtgctgcaggaacggctggatgccgccagacaggcattgtctgaggca
cggaggcagagcagctccctgggtgagcaggtgcagactctgcggggcgagctggccagc
ctggagctgcagcggggcgatgctgaaggccagctgcagcagctgcagcaggtgctgcga
cagcggcaggaaggggaggccatggctctgcgctccgtgcagaagctgcaggaggagcgg
cgcctgctgcaggagcgcctgggcagtctgcagcgagccctggcccagctggaagccgag
aaacgcgagctggaacgctcagccctgcagctcgacaaggaccgtgtggccctcaggaag
acgctggacaaggtggagcgggagaagctccgaagtcgcgaggacacgctgcgcttgaat
gcagagaaaggccgcctggaccgcacgctcacaggagccgagctggacctggccgaggcc
cagcagcagatccaacacttggaggtggtggaagccctggaggggaaccacagtctggtc
cagccagaggcggaggagcagcagcaggagctgcaacaggaggttgagcgtctgcgcagt
gcccagctacagacagagcgcacgctggaggcccgggagcgggctcaccgccagcgggtg
tcggggctggaggagcaggtgtccacactgaaggcacagctgcagcaggagcttcgcagg
agctcggcgtccgcctccctacccgctggcacccccgagaaatga
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integrated database retrieval system
