KEGG   Apodemus sylvaticus (European woodmouse): 127681651
Entry
127681651         CDS       T10613                                 
Symbol
Plod1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl00310  Lysine degradation
asyl01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    127681651 (Plod1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asyl04147]
    127681651 (Plod1)
Enzymes [BR:asyl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     127681651 (Plod1)
Exosome [BR:asyl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127681651 (Plod1)
SSDB
Motif
Pfam: GT_PLOD 2OG-FeII_Oxy OGFOD2-like Anp1 2OG-FeII_Oxy_3 PRP38
Other DBs
NCBI-GeneID: 127681651
NCBI-ProteinID: XP_052034088
LinkDB
Position
3:complement(163067496..163095401)
AA seq 728 aa
MRSLLLLAPLAWLLLVQAKDDAKLEDNLLVLTVATKETEGFRRFKRSAQFFNYKIQSLGL
GEDWSVDGGPAAAGGGQKVRLLKKALEKHADKEDLVVLFVDSYDVVFASGPRELLKKFQQ
AKSRVVFSAEELIYPDRRLEAKYPTVPDGKRFLGSGGFIGYAPSLSKLVAEWEGQDSDSD
QLFYTKIFLNPEKREQINISLDHRCRIFQNLDGALDEVVLKFEMGHVRARNLAYDTLPVV
VHGNGPTKLQLNYLGNYIPRFWTFETGCTVCDEGLRSLKGIGDEALPTVLVGVFIEQPTP
FLSLFFLRLLRLRYPRKQMRLFIHNHEQHHKLQVERFLAEHGSEYQSVKLVGPEVRVANA
DARNMGADLCRQDPTCTYYFSVDADVALTEPNSLWLLIEQNKNVIAPLLTRHGRLWSNFW
GALSADGYYARSEDYVDIVQGRRVGVWNVPYISNVYLIKGSALRAELQNVDLFHHSKLDS
DMSFCANVRQQEVFMFLTNRHTFGHLLSLDNYQTTHLHNDLWEVFSNPEDWKEKYIHENY
TKALAGKLVETPCPDVYWFPIFTEAACDELVEEMEHYGQWSLGDNKDNRIQGGYENVPTI
DIHMNQITFEREWHKFLVEYIAPMTEKLYPGYYTRAQFDLAFVVRYKPDEQPSLMPHHDA
STFTVNIALNRVGEDYEGGGCRFLRYNCSVRAPRKGWALMHPGRLTHYHEGLPTTKGTRY
IAVSFVDP
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgcggtccctgctgctcctggccccgttggcctggcttcttctggtccaggcgaaggac
gacgccaagctagaggacaaccttttggtcctcactgtggccacaaaagagaccgagggc
ttccgccgcttcaagcgttcagctcagttcttcaactacaagatccagtcactgggcctt
ggggaggactggagcgtggatggaggaccagcagcagcaggcggaggacagaaggttcgg
ctgctgaagaaggcgctggaaaagcacgcggacaaggaagacctggttgttctctttgtt
gacagctatgacgtggtgtttgcctcgggaccccgggaactcctaaagaagttccagcag
gccaagagtcgggtggtcttctccgcagaggagcttatctaccccgaccggaggctggag
gccaagtaccccacagtccccgatggcaagcggttcctgggctctggaggtttcattggc
tatgcccccagcctcagcaaactggtggctgagtgggaaggccaggacagtgacagtgac
cagctcttctataccaagatcttcttgaacccggagaagagggagcaaatcaacatcagt
ctggaccatcgctgccgaatcttccagaacctggacggagccttggatgaagtcgtactc
aagtttgaaatgggccacgtgagagcacggaatctggcctatgacaccctcccagtggtc
gtccatggcaacgggcccaccaagctgcagctgaactacctgggcaactacatccctcga
ttctggaccttcgagacgggctgcaccgtgtgcgacgagggcctgcgaagcctcaagggc
attggggatgaagctctccccactgtcctggtcggggtgttcattgagcagcccacacca
tttctatccctgttcttcctgcggctgctgcgcctacgatacccccggaaacagatgagg
ctcttcattcacaaccacgagcagcaccacaagctgcaggtagagcggttcctggcggag
catggcagtgaataccagtctgtgaagctagtgggtcctgaggtgcgcgtggccaacgca
gacgccaggaacatgggcgcagacctgtgccgtcaggacccgacgtgtacctactacttc
agtgtggatgccgatgtggccctgactgagcccaacagcctctggctcctgattgaacaa
aacaagaacgtcattgcgccgctcctgactcgccatgggaggctctggtccaacttctgg
ggggctctgagtgcagacgggtactacgcgcgctcggaggactacgtggacattgtgcag
ggccgccgtgttggcgtctggaacgtgccttacatctcaaacgtctacctgatcaagggc
agtgctctgcgggccgagctgcagaacgtagaccttttccaccacagcaagctggattcc
gacatgagtttctgcgccaatgttcgacagcaggaggtattcatgttcctgacgaaccga
catacctttggccacctgctgtccctggataactaccagaccacccacctacataatgat
ctctgggaggtgttcagcaaccctgaggattggaaagagaagtatatccacgagaattac
accaaggccctggcggggaagctggtggagacgccttgcccggatgtctactggttcccc
atcttcacggaggcggcctgtgatgagctggtggaggagatggaacactatggtcagtgg
tccctgggggataataaggacaaccgcatccagggtggctatgaaaatgtgcccactatt
gacatccacatgaatcagatcaccttcgagcgggagtggcacaagttcctggtggaatac
atcgcccccatgacagagaagctgtaccctggctactacaccagggcccagtttgatcta
gccttcgtcgtccgctataagcctgatgagcagccttccttgatgccccaccatgacgcc
tctaccttcaccgtcaacatagccctgaacagggttggggaagattatgagggcggaggt
tgccgatttctgcgctacaactgctctgtgagagccccaaggaaaggctgggccctcatg
caccctggacggctcacacactatcacgagggacttcccaccaccaagggcacacgctac
attgccgtgtccttcgtcgacccctaa

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