Apodemus sylvaticus (European woodmouse): 127681730
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Entry
127681730 CDS
T10613
Symbol
Nphp4
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4
KO
K16478
nephrocystin-4
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
Cilium and associated proteins [BR:
asyl03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
127681730 (Nphp4)
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NCBI-GeneID:
127681730
NCBI-ProteinID:
XP_052034260
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Position
3:167743318..167828581
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AA seq
1427 aa
AA seq
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MDDWRRAFAQNALVPPHPQRARQLGKESTAFQCILKWLEGPLIKQGILDLLSELECHLRV
SLFDVTYKHFFGRTWKTTVKATNQLSKQPARIIFNEPLYFHTTLSHPSIVAVVEVVAEGR
KRDGALQVLSCGFGILRIFGNKPESPTSAAQDKRLRLYHGTPRALLHPLLQDPIEQNKYM
TLMENCSLQYTLKPHPPLEPAFHLLPENLLVSGFQQIPGLLPPHGDTGDALRKPRFQKPT
TWHLDDLFFTLYPSLEKFEEELVQLLISDHFREGVGLLDSGTLEVLERRLHVCVHNGLGF
VHRPQVVVLVPEMDVALTRSASFSRRISASSKNSSGNQALVLRSHLRLPEMVSHPAFAIV
FQLEYVFNRPSGADASASSSTSTPSLACMHMVRWAVWNPDLEAAPGKVTLPLQGGVQQNP
SRCLVYKVPSASMSSEEVKQVESGTIQFQFSVSSGAPTEHASGPRAGRRASRKTPASPSG
TPAPSARDLAAVQDSPVGPGLSLSQLAASPPSPALRSSSKPPPQPPDSSQSPEGPQLQAE
SVLEGRVSHLEADLSQPPLVQGTPAVEHLQELPFTPLHAPIVVGAQTRSSRSQLSRAAMV
LLQSSGFPEILDASQQPVEAVNPADPVRFNPQKEESDCLRGNEIVLQFLAFSRAAQDCPG
APWPQTVYFTFQFYRFPPETTPRLQLVKLDGTGKGGSGPLSHILVHISKDGSFDAGSPGF
QLRYMVDPGFLKPGEQHWFAHYLAAQTLQVDVWDGDSLLLIGSAGVQMKHLLRQGRPAVQ
VAHELEVVATEYEQEMMAMSGDVAGFGSVKPIGVHTVVKGRLHLTLANVGHACEPRARGS
NLLPPSRSRVISNDGASFFSGGSLLVPGGSRRKRVVQAQRLADVDSELAAMLLTHTPAGQ
GPRAAGQEADAVHRRKLERMRLVRLQEAGGDSDSRRISVLAQHSVRAQHSRDLQVIDAYR
ERTKAESISGVLSQALTTHHTLYATLGTAEFFEFALKNPHNTQHTVAIEIDSPELSIILD
SQEWRYFKEATGLHTPLEEDMFHLRGGLAPQLYLRPRETAHIPLKFQSFSVGPLAPTQAP
AEMISEKDTESGPLWKCSAMPTKHAKVLFRAETGQLIAVLCLTVEPQPHVVDQVFRFYHP
ELTFLKKAIRLPPWHTLPGAPVGIPGEGPPVHVRCSDPNVICEAQNVGPGEPRDIFLKVA
SGPSPEIKDFFVIIYADRWLAVPVQTWQVCLHSLQRVDVSCVAGQLTRLSLVLRGTQTVR
KVRAFTSHPQELKTDPAGVFVLPPHGVQDLHVGVRPRRAGSRFVHLNLVDVDYHQLVASW
LVCLSCRQPLISKAFEITMAAGDTKGFNKRITYTNPYPSRRTYRLHSDRPDLLHFKEDSF
QVAGGETYTIGLRFLPSGSPGQEEVLIYINDHEDKNEETFCVKVLYQ
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggatgactggcgcagagccttcgcccagaacgcactggtccctccccacccacagaga
gcgcggcagctcgggaaggagtccacagcgttccagtgcatcctgaagtggctcgaaggg
cctctcattaagcaggggatcctagacttgctgtcggagcttgaatgccatctgcgagtg
tctctcttcgatgttacctacaaacatttctttgggaggacgtggaaaaccacagtgaag
gccaccaatcaactctctaagcagccagccaggatcatcttcaatgagcccttgtacttc
cacacgaccctgagccaccccagcatcgtggctgtggtggaagtggtcgctgaaggcagg
aagagggacggcgccctgcaggtgctgtcctgtgggtttggaattcttcgcatctttggc
aataagccagaatctcctacctctgctgcccaggacaaacggttgaggctgtatcatggc
acccccagagccctcctgcacccgcttctccaggatcccatagaacagaacaagtacatg
acgctgatggagaactgtagcctgcagtataccctgaagccacacccacccctggagccc
gccttccacctgctccctgagaacctcctggtgtctggtttccagcagatccctggcctc
ctccctccgcacggggacacgggtgatgccctgcggaagcctcgcttccagaagcccacc
acatggcacttagatgacctcttcttcaccctatacccctccctggagaagtttgaggag
gaacttgtgcagctgctcatcagcgaccacttccgggagggggtcggcctgctggatagc
ggcaccctagaggtcctagagcggcgcctgcacgtctgtgtccacaacgggctgggcttc
gtgcacaggccgcaggtggttgtgcttgtgcctgagatggacgtggccctgactcgctcc
gccagcttcagcaggagaatcagtgcctcttccaagaacagctccggaaaccaggctcta
gttctgagaagccacctgcggctcccggagatggtcagccacccggccttcgccattgtc
ttccagctggagtacgtgttcaaccgcccctcaggagcggacgccagcgccagctcgtcc
acctcaacacccagcctggcgtgcatgcacatggtccgatgggctgtctggaaccccgac
ctggaagcggccccgggaaaggtgacactgcctcttcagggtggggtacagcagaacccc
tcacgctgtttggtctataaggtgccttccgctagcatgagctccgaggaggtgaagcag
gtggagtccggaaccatccagttccagttctcagtgagctcaggtgcccccacagagcat
gccagcggccccagggcagggcggcgtgcctccaggaagacaccggcatccccttcaggt
accccagcgccatcagcccgggacctcgctgcagttcaggactctcctgtgggcccaggg
ctctcgctttctcagctggcggcctccccaccgtctccggccctgcgaagctcttccaag
ccccctcctcagcccccggacagttctcagtccccagagggtccccagctccaggcagag
tctgtgttagagggcagggtctcgcacctggaagccgacttgagccagccgcccctggtt
caggggacgcctgctgtagaacatctacaggaacttcccttcactcctctgcatgccccc
attgttgtgggagcccagaccaggagctccagaagccagctctccagagccgcgatggtg
ctcctgcagtcctcgggcttccccgagatcctcgacgccagccagcagccagtggaagcc
gtcaatccggccgatcccgtgaggtttaacccccagaaggaggagtcggactgtctccgg
gggaatgagatagtgctgcagtttctcgccttcagcagagcggcccaggactgcccagga
gcaccgtggccacagaccgtgtatttcaccttccagttctaccgtttcccacccgagacc
acgccacgcctgcagctggtcaagctggatgggacaggcaagggcggctctggccccctg
tcccacatcctcgtccacattagtaaagatggttccttcgatgctggctcccccggcttc
cagctgaggtacatggtggatcccggcttcctgaaaccaggagagcagcactggtttgcc
cactacctggccgctcagacgctgcaggtcgacgtctgggatggagactccttgctgctc
attggctctgccggcgtccagatgaagcacctcctccgccaagggcggcccgctgttcag
gtcgcacacgaactggaggtcgtggccaccgagtacgaacaggaaatgatggccatgagc
ggtgacgtggctggcttcggcagcgtcaagcccatcggggtccacacagtagtgaagggc
cggctgcacctgaccttggccaacgtgggtcacgcgtgtgagccgagagcaagaggttcc
aacctgctgcccccatccaggtctcgggtcatctcaaatgatggagccagtttcttctct
gggggaagcctcctcgtaccaggaggctccaggcggaagcgtgtggtacaagcacagagg
ctggctgatgtggacagcgagctggccgccatgctgctgacccacacaccagccggccag
gggccccgggctgcgggccaggaggcagatgcggtgcacaggcgtaagctggaaaggatg
cggttggtgcgcctgcaggaggcaggaggggactcagacagccgcaggatcagtgtgctg
gcccagcacagtgtccgtgcacagcactcacgggacttgcaggtcatcgatgcctaccgg
gagcgcaccaaggccgagagcatctctggggtcctgagccaggccctcaccacccaccac
acattgtacgccacactgggcacggccgagttcttcgagtttgctcttaaaaacccacac
aacactcagcacacggtggccattgaaatcgacagccctgagctcagcatcatcctggac
agccaggagtggcggtacttcaaggaggccaccggcctgcacacgcccctggaggaggac
atgttccacctgcgtgggggcctggcgccccagctctacctgcgaccccgggagactgcc
cacattcccctcaagttccagagcttctctgtgggcccgcttgctcccacacaggcccct
gctgagatgatctcagagaaggacacagagtctggacccctttggaagtgcagcgccatg
cctacgaaacacgccaaggtccttttccgggcggagactggccagctcattgctgtgctg
tgcttgacggtggagccccagccccacgtggtggaccaggttttccgcttctaccaccca
gaactcaccttcctgaagaaggccatccgcctgcctccctggcacacgcttccaggtgct
cccgtggggatacctggcgagggccccccagtccacgtccgatgcagtgacccgaatgtc
atctgtgaggcccagaacgtgggccctggtgagccgagggacatattccttaaagtggcc
agcggtccgagcccggagatcaaagacttctttgtcatcatctatgcggatcgctggctg
gcggtgcccgtgcagacgtggcaggtctgccttcactccctgcagcgcgtggatgtttcc
tgtgtcgcaggacagctgacccgcctgtccctcgtcctgcgggggacacagaccgttagg
aaagtgagagctttcacctcccaccctcaggaactgaagacagaccctgccggcgtcttt
gtgttgccacctcacggggtacaggacctgcacgtgggcgtgaggccgcggagggctggc
agccgcttcgtccacctcaacctggtggacgtggactaccaccaactggtcgcctcgtgg
ctcgtgtgcctctcctgccgccagccgctcatttccaaggccttcgagatcaccatggcg
gccggggacacgaagggcttcaacaaaaggatcacctacactaacccctacccttctcgg
aggacctaccggctgcacagtgaccgccccgacctgctgcacttcaaggaagactccttc
caggtggcgggaggagaaacctacaccatcggcctgcggttcctgccaagtggcagcccc
gggcaggaggaggtcctgatctacatcaatgaccacgaggacaagaacgaagagacattc
tgcgtgaaggtcctctaccagtga
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