Apodemus sylvaticus (European woodmouse): 127681915
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Entry
127681915 CDS
T10613
Symbol
Trpm1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asyl04040
]
127681915 (Trpm1)
Ion channels [BR:
asyl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127681915 (Trpm1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
EBNA2_Core
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
127681915
NCBI-ProteinID:
XP_052034423
LinkDB
All DBs
Position
1:complement(144401945..144521870)
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AA seq
1622 aa
AA seq
DB search
MGSMRKMSSSFKRGSIKSSTSGSQKGQKAWIEKTFCKRECIFVIPSTKDPNRCCCGQLTN
QHIPPLPSGAPSTAGEDTKQVDTQSVKWSVSKHTQSYPTDSYGILEFQGGGYSNKAMYIR
VSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQSFEMQPKLKQVFGKGLIKAAMTTGAW
IFTGGVSTGVVSHVGDALKDHSSKSRGRLCAIGIAPWGMVENKEDLVGKDVTRVYQTMSN
PLSKLSVLNNSHTHFILADNGTLGKYGAEVKLRRQLEKHISLQKINTRLGQGVPVVGLVV
EGGPNVISIVLEYLREDPPVPVVICDGSGRASDILSFAHKYCDEGGVINESLRDQLLVTI
QKTFNYSKSQSHQLFAIIMECMKKKELVTVFRMGAEGQQDVEMAILTALLKGTNASAPDQ
LSLALAWNRVDIARSQIFVFGPHWPPLGSLAPPVDTKATEKEKKPPTATTKGRGKGKGKK
KGKVKEEVEEETDPRKIELLNWVNALEQAMLDALVLDRVDFVKLLIENGVNMQHFLTIPR
LEELYNTRLGPPNTLHLLVRDVKKSNLPPDYHISLIDIGLVLEYLMGGAYRCNYTRKSFR
TLYNNLFGPKRPKALKLLGMEDDEPPAKGKKKKKKKKEEEIDIDVDDPAVSRFQYPYHEL
MVWAVLMKRQKMAVFLWQRGEECMAKALVACKLYKAMAHESSESELVDDISQDLDNNSKD
FGQLAVELLDQSYKHDEQVAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTD
MWMGRLRMRKNPGLKVIMGILIPPTILFLEFRTYDDFSYQTSKENEEGKEKEEENVDANA
DAGSRKGDEENEHKKQRSIPIGTKICEFYNAPIVKFWFYTISYLGYLLLFNYVILVQMEG
WPSPQEWIVISYIVSLALEKIREILMSEPGKLSQKIKVWLQEYWNITDLVAISMFMVGAI
LRLQNQPYMGYGRVIYCVDIILWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLV
VLMSFGVARQAILHPEEKPSWKLARNIFYMPYWMIYGEVFADQIDLYAMEINPPCGENLY
DEEGKRLPPCIPGAWLTPALMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRY
QLIMTFHDRPVLPPPMIILSHIYIIVMRLSGRCRKKREGDQEERDRGLKLFLSDEELKKL
HEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERENFMKTSLQTVDL
RLSQLEELSGRMVSALENLAGIDRSDLIQARSRASSECEATYLLRQSSINSADGYSLYRY
HFNGEELLFEEPALSTSPGTVFRKKTCSFRVKEEDAKSHLDQPSSLHHTPGPSPPATPGR
SRLALDGPLSADIRPGSDPGISAGELEPRADFKSAEAAPSLNLAGVAGTQLTVESTVSHP
LRESKLARYYPGDPNTYKTMKSRSFVYSEGRKLVRGLSNWGAEYSSIMDQAWNSAEWRCQ
VQRITRSRSTDIPCIVSEAASQDEVEDEHRGSLLAPQISRSALTVSDRPEKENLLSVKPH
QTLGFSCLRSRSLHGHPKSAEPAPSKLDRAGHASSISNLAVVSVAPEGQNTQQEKRSGET
EC
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatgaggaagatgagcagctccttcaagcgtggttcaatcaagagctccaca
tcagggtcccagaagggtcagaaagcatggatagagaagacattttgcaaaagggaatgc
atctttgtgattcccagtacaaaagaccctaacagatgttgctgtggtcagctcactaac
cagcacatcccccctctgccgagcggggctcccagcacagcaggagaggacaccaagcag
gtggacacgcagtcggtgaaatggtctgtcagcaaacacacccagagctacccaacagac
tcctatgggattctcgaattccagggtgggggctactccaataaagccatgtacatccga
gtttcctacgacaccaagccagattccctgctccatctcatggtgaaggattggcagttg
gagctccccaagctcttgatatctgtgcatggaggcctccagagcttcgagatgcagccc
aagctgaagcaggtgtttgggaaaggtctgatcaaggctgccatgaccacgggggcgtgg
atcttcaccgggggtgtgagtactggtgtcgtcagccacgtgggggatgccttgaaagac
cactcctccaagtccagaggccggctctgtgctataggaatcgctccctggggcatggtg
gagaataaggaagacctggttgggaaagatgtaacaagagtctaccagaccatgtccaac
cctctgagcaagctctccgtgctcaacaattcccacactcatttcatcttggctgacaac
ggcaccctgggcaagtatggtgctgaggtgaaacttcgaagacagctggaaaagcacatc
tctctgcagaagatcaacacgaggctgggccagggtgtacctgttgtgggccttgtggtg
gaaggtggccctaacgtcatttctatcgtcctggagtatctcagagaagaccctcctgtc
cctgtggtgatctgtgacggcagtggacgtgcctctgacattttatcctttgcacacaaa
tactgcgatgaaggaggggtcataaacgagtccctgcgggaccagcttctagttaccatt
cagaaaacatttaattacagcaagtcccaatcgcatcagctgtttgcgattatcatggag
tgcatgaagaagaaagaactcgtcactgtgtttcggatgggtgctgaggggcagcaagac
gtcgagatggcaattttaacggccttgctcaaaggaaccaatgcgtcagctccagatcag
ctgagcttggcactggcttggaaccgtgtcgacatagcgcgaagccagatcttcgtcttt
ggcccacactggccgccactgggaagcctggcccctcctgtagacaccaaagccacagag
aaagagaagaagccacccacagccaccaccaagggaagaggaaaaggaaaaggcaagaaa
aaaggcaaagtgaaggaggaggtggaggaagaaacggacccccggaagatcgagctgctg
aactgggtgaacgccctggagcaagccatgctggatgctcttgtcttggatcgggttgac
tttgtgaagcttctgattgaaaacggagtgaatatgcagcacttcctcaccatcccgagg
ctggaggagctttataacaccagactgggcccaccaaacaccctccatctgctggttcgg
gatgtgaagaagagcaaccttccacccgattaccacatcagcctcatcgatataggactg
gtgctggagtacctcatgggcggtgcctaccgctgcaactacactcggaaaagcttcagg
actctctacaacaacttgtttggccctaagaggccgaaagcacttaagcttctgggaatg
gaagatgacgagcccccagccaaaggaaagaagaaaaagaagaagaagaaagaggaagaa
atcgacatagatgtggacgaccctgctgtgagtcggttccagtacccttaccacgagctc
atggtatgggctgtgctcatgaagcgccagaagatggcggtcttcctgtggcagcgtggg
gaagagtgcatggcaaaggccttggtggcctgcaagctctacaaggccatggcccacgag
tcctccgagagcgagctggtggatgacatctcccaggatctggacaacaattccaaagat
tttggccagctcgccgtggagctgttagaccagtcttacaagcatgacgagcaggtcgcc
atgaaacttctgacctatgagctcaagaactggagcaactcgacctgcctcaagctggct
gtggcagccaagcaccgggacttcattgctcacacctgcagccagatgctgctcacagac
atgtggatgggaaggcttcgcatgaggaagaaccccggcctgaaggtcatcatggggatc
ctcatcccgcccaccatcttgtttttggaattccgtacatatgatgatttctcctatcag
acatccaaggagaatgaagaaggcaaagaaaaggaagaagagaatgtggatgcaaatgca
gatgctggctcgagaaagggggatgaggagaatgagcacaaaaaacagaggagcattccc
attggaacaaagatctgtgaattctataatgcgcccattgtcaagttctggttttacaca
atctcctacttgggctacttgctgctgttcaactatgtcatcctggtgcagatggaggga
tggccctctccccaagagtggattgtcatctcctacattgtgagcctggcattagagaaa
atccgagagatcctcatgtcggaaccaggcaaactcagccagaaaatcaaagtgtggctc
caggagtactggaacatcacagacctcgtggccatctccatgttcatggttggggctatc
ctgcgcctccagaaccagccatacatgggctatggccgggtcatctactgcgtggatatc
atcctctggtacatccgagtgttagacatctttggtgtcaacaaatatcttggcccctat
gtgatgatgattggaaagatgatgattgacatgctgtactttgtggtcattatgctggtt
gtgctgatgagttttggagtggctcggcaagctatcttgcacccagaggagaagccttct
tggaaactggcccgaaacatcttctacatgccctactggatgatctatggagaggtgttt
gcagaccagatagacctctatgccatggaaatcaaccctccttgtggtgaaaatctctat
gatgaggaaggcaagaggctccctccctgcatccctggtgcctggctcacacccgccctc
atggcctgttacctgctggtggccaacatcctgctggtcaacctactgatcgctgttttc
aacaataccttctttgaagtcaagtcaatatccaatcaagtgtggaagttccagcgatac
caactgatcatgacatttcacgacaggccggtcctgcccccgccaatgatcatcttaagc
cacatctatatcatcgttatgcgtctcagtggtcgctgcaggaaaaagagagaaggggac
caggaggagcgggatcgtgggttgaagctgttcctcagtgatgaggaactgaaaaaactg
catgagtttgaggagcagtgcgtgcaggagcacttccgggaaaaggaggatgaacagcag
tcgtccagcgatgagcgcatccgggtcaccagcgagagggttgaaaatatgtcaatgagg
ctggaggaaatcaatgaaagagaaaatttcatgaaaacatctctgcagactgttgatctt
cggctctctcagctggaggagctatccggcaggatggtcagcgctctggagaatctggca
ggcatcgacaggtctgacctgatccaggctcgatcacgagcatcctcagaatgcgaggcc
acctacctgctgcggcagagcagcatcaacagtgctgatggctacagcttgtaccgctac
catttcaatggcgaggagcttctgtttgaggagcctgccctctctacttcgccagggaca
gtgttccggaaaaaaacctgctccttccgggtgaaggaagaggatgcaaagtcgcacctg
gaccagccaagcagcctgcaccacacccctggccccagcccacctgctacgccaggccgc
agccggcttgcccttgacggtcccttgagcgcggatataagacctggatcggaccctggc
atctctgcaggcgagttagaaccgcgggcagatttcaagagcgcagaagctgcaccgagt
ttgaacttagcaggcgttgcaggcactcaactgactgttgagagcactgtttcccaccct
ctgcgggagagcaaactggctcgctactacccgggagaccccaacacctacaaaacaatg
aagtctagaagcttcgtctattctgaaggaagaaagctagtccggggtcttagcaactgg
ggtgccgagtacagttcaatcatggaccaagcatggaactcggcagaatggagatgccaa
gttcaaaggatcacgcgctcccgcagcacagacatcccatgcatcgtgtctgaagcagcc
tcgcaggatgaggttgaggatgagcacagaggatctcttctggctcctcagatctctcgt
tcagccctcaccgtctcagacaggccggaaaaggaaaatttattgtctgtgaagccacac
cagactttaggattctcctgcctacggtcaagaagtttacatggccatcctaagagtgct
gaaccagctcctagcaaattagacagggcaggacatgccagcagcattagcaacttagca
gttgtgtctgttgctccagagggacaaaatacccagcaagagaaaagaagcggggaaact
gaatgctaa
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integrated database retrieval system
