Apodemus sylvaticus (European woodmouse): 127682039
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Entry
127682039 CDS
T10613
Symbol
Mkrn3
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-3
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127682039 (Mkrn3)
Enzymes [BR:
asyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127682039 (Mkrn3)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127682039 (Mkrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCCH_PARP12
zf-rbx1
zf-CCCH_DUS3L
zf-RING_5
zf-CCCH_RBM22
zf-C3HC4_4
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
127682039
NCBI-ProteinID:
XP_052034428
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All DBs
Position
1:complement(147104229..147106780)
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AA seq
554 aa
AA seq
DB search
MEESTAPTKARAAAGAEAGAEGGEGVSVPPHPQFEASGASAVASSAPLQQVSGLAPFLVA
PVPANRRAASLRPAPAEGGGARSGQERNSGSWTKQILCRYYLHGQCKEGDNCRYSHDLSG
RRRARGGQDSQPRASADRGPKMATRWEPPTQEVAEAPPTASSSSLPLIGSAAERGFSEAE
IDNAGIGLAAERGFSEAEIDNAGLAAGAAGGAGAEGWVGAIEFVPGQPYRGRMVPPHGPQ
APMLSPAIEREHMAMGMGMPMPPMPMPMPMPMPMPMPMPMPMPMPLPLCRYAARGECLRG
DRCPYPHGEICDMCGHQALHPWDAAQQEAHRRACVEAHERDMELSFAVQRSMDKVCGICM
EVVYEKADPSDRRFGILFCCNHTFCLRCIRRWRSASQFENRISKSCPQCRVSSGFVIPSE
FWVEEEEEKEKLVQQYKEGMSQKACRYFAGGLGHCPFGEFCFYKHEYPEGWRDQPPRPGG
GGGSSSAYWHQVLEPVQLREGNVLFKSRKKEHSVLRLANQLLKKLLSLRGSSSISDDRWL
LLQYQLEEYFSSNL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtctacagctcccactaaggcccgcgcggccgccggcgccgaggcaggtgct
gaggggggggagggtgtgtctgttcccccccatcctcagtttgaggcttctggagcttct
gcggtagccagctcagctcctctgcaacaggtgtcgggcctggcaccgttccttgtggct
ccggtccctgcgaaccggcgcgcggcgagtttgagacccgctcccgccgaagggggcggg
gccaggtctggtcaggagcgcaacagtggcagctggacgaagcaaatcctctgcaggtat
tatctgcatgggcagtgcaaagagggcgataactgtcgctactctcacgacctttctggg
cggcggagagctagagggggccaagattctcagcctcgggcctctgcagatagaggaccc
aagatggccactcgttgggagcccccgactcaggaagtggcggaagccccccctactgca
tcctcaagctccttgcctctgattggctcggctgctgaaaggggcttctctgaagctgag
attgacaatgcaggcattggcttagctgctgaaaggggcttctctgaagctgagattgac
aatgcaggccttgcagcaggtgctgcgggaggagcaggtgcagaaggctgggtgggggca
attgagtttgttcccggacagccttaccgaggtcgcatggttcccccgcatggcccccag
gctcctatgctgagcccggcaattgagagagagcatatggctatgggcatggggatgccg
atgccgccaatgccgatgccgatgccaatgccgatgccgatgccgatgccgatgccgatg
ccaatgccaatgccgctgccgctttgccgctatgctgcccggggagaatgtctccgtggg
gacaggtgtccatatccccatggagaaatatgcgacatgtgcgggcatcaggccttgcac
ccttgggatgcagctcagcaggaagctcatagaagggcctgcgttgaagcacacgagaga
gatatggagctctcttttgctgtgcagcgcagcatggacaaggtgtgtggcatctgcatg
gaggttgtctatgagaaagctgatcccagcgaccgccgctttggcatccttttctgctgc
aaccacaccttctgtcttaggtgtatccgcaggtggagaagtgcctcccagtttgagaac
aggatcagtaagtcctgcccacagtgcagggtctcctctggctttgtcattcctagtgag
ttctgggtggaggaggaagaggagaaggagaagcttgttcagcaatataaggagggaatg
agccagaaagcctgcaggtattttgctggaggccttggtcactgcccatttggagaattc
tgtttttacaagcacgaataccccgagggctggagagatcagcctccgagacccggtggt
ggtggaggatcttcaagcgcctactggcatcaagttttggagcctgtgcagttgcgagag
ggaaacgtgctgtttaaaagccgtaagaaggagcattccgtgcttcgcctggccaatcag
ttgcttaagaagttgctttccctgagaggcagttcttccatctctgatgaccggtggctc
ttgcttcagtaccagctggaagaatatttcagttcgaatctgtag
DBGET
integrated database retrieval system
