Apodemus sylvaticus (European woodmouse): 127682368
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Entry
127682368 CDS
T10613
Symbol
Pabpc4l
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03015
mRNA surveillance pathway
asyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127682368 (Pabpc4l)
09123 Folding, sorting and degradation
03018 RNA degradation
127682368 (Pabpc4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127682368 (Pabpc4l)
03041 Spliceosome [BR:
asyl03041
]
127682368 (Pabpc4l)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127682368 (Pabpc4l)
mRNA cycle factors
Stress granule specific factors
127682368 (Pabpc4l)
Spliceosome [BR:
asyl03041
]
Complex C
Other components
Complex C specific factors
127682368 (Pabpc4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
RRM_7
RRM_Nup35
RRM_occluded
RRM_MARF1
Nup35_RRM_2
RRM_3
Dbl7
RB_A
Motif
Other DBs
NCBI-GeneID:
127682368
NCBI-ProteinID:
XP_052034693
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All DBs
Position
4:122125267..122126788
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AA seq
370 aa
AA seq
DB search
MSLEAKYRAASLYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLISQRSLGYAYVNFLQ
VNDAQKALETMNFDVIKGKSIRLMWSQRDACLRKSGLGNVFIKNLDKSIDNKTLYEHFSP
FGKIMSSKVMTDEEGSKGYGFVHYQDQRAANRAIEEMNGKLVRNSTLFVARFKSRQDREA
ELRDRPTEFTNVYIKNFGDDIDDEKLRKVFSKYGQTLSVKVMKDATGKSKGFGFVSFDSH
EAARKAVEDMNGQDINGQTVFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNL
DETIDDETLRKEFSAFGSICRVKVMQEAGQSKGFGLICFFSPEAAARAMAEMNGRILGSK
ALNIALGQKH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggaagctaagtaccgtgcagcttccctgtatgtgggtgacctccacgaagat
gttacagaggacgtgctgttcaggaagttcaacacagtggggccagtgttgtccatccga
atctgcagggacctgatttcccaacgttctctaggctatgcctatgtcaattttctccag
gtgaatgatgcccagaaggccctagagaccatgaacttcgatgtgatcaaaggtaaatcc
atccgtctcatgtggtctcaacgggatgcttgcctgaggaaatcgggactcgggaatgtg
tttatcaagaatctggacaaatccattgataataaaaccttgtatgaacacttctcacct
tttggaaagatcatgtcctccaaggtgatgactgacgaagaaggctccaagggctacggc
ttcgtgcactaccaagaccagagagcagcaaacagggccattgaggagatgaatgggaag
ctggtgaggaatagcactttgttcgtggccagattcaaaagccgccaggatcgggaggct
gagctcagagacagaccaacggaattcactaatgtgtatatcaaaaactttggggatgac
atagacgatgagaaactaaggaaagttttcagtaaatacggccaaactttgagtgttaag
gtgatgaaagatgccactgggaagtccaaaggctttggatttgtgagttttgatagccac
gaggctgcaagaaaggcagttgaagatatgaatggacaggacataaacgggcagacggtt
tttgtaggcagagctcagaagaaggtagagcgacaggctgagttaaaggaaatgtttgag
cagatgaaaaaggaaagaatccgtgcacgtcaggcagctaagctctacattaagaacctg
gatgaaaccatcgatgatgaaacccttcgcaaggaattttctgcctttgggtccatttgc
agagttaaagtgatgcaggaagcagggcagagcaaaggctttggcttgatctgcttcttc
tccccggaggcagcagctagggcaatggctgagatgaatggccgcatccttggctccaaa
gccctcaacattgcactgggtcagaaacactga
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