Apodemus sylvaticus (European woodmouse): 127682394
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Entry
127682394 CDS
T10613
Symbol
Sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04390
Hippo signaling pathway
asyl04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
127682394 (Sox2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
127682394 (Sox2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asyl03000
]
127682394 (Sox2)
Transcription factors [BR:
asyl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127682394 (Sox2)
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Paralog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127682394
NCBI-ProteinID:
XP_052034738
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All DBs
Position
4:complement(135060280..135061242)
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AA seq
319 aa
AA seq
DB search
MYNMMETELKPPGPQQASGGGGGGGNATAAATGGNQKNSPDRVKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT
LMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQEQL
GYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALG
SMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMAQHY
QSGPVPGTAINGTLPLSHM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagacggagctgaagccgccgggcccgcagcaagcttcggggggc
ggcggcggaggaggcaacgccacggcggcggcgaccggcggcaaccagaagaacagcccg
gaccgtgtcaagaggcccatgaacgccttcatggtgtggtcccgggggcagcggcgtaag
atggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgccgag
tggaaacttttgtcggagaccgagaagcggccgttcatcgacgaggccaagcggctgcgc
gctctgcacatgaaggagcacccggattataaataccggccgcggcggaaaaccaagacg
ctcatgaagaaggataagtacacgcttcccggaggcttgctggcccccggcgggaacagc
atggcgagcggggttggggtgggcgccggcctgggtgcgggcgtgaaccagcgcatggac
agctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggagcagctg
ggctacccgcagcacccgggcctcaacgctcacggcgccgcacagatgcagccgatgcac
cgctacgacgtcagcgccctgcagtacaactccatgaccagctcgcagacctacatgaac
ggctcgcccacctacagcatgtcctactcgcagcagggcacccccggtatggcgctgggc
tccatgggctctgtggtcaagtccgaggccagttccagcccccccgtggttacctcttcc
tcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatgtacctc
cccggcgccgaggtgccggagcccgctgcgcccagtagactgcacatggcccagcactac
cagagcggcccggtgcccggcacggccattaacggcacactgcccctgtcgcacatgtga
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