Apodemus sylvaticus (European woodmouse): 127682478
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Entry
127682478 CDS
T10613
Symbol
Lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127682478 (Lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asyl04515
]
127682478 (Lrrc4b)
Cell adhesion molecules [BR:
asyl04515
]
Immunoglobulin superfamily
NGL family
127682478 (Lrrc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
LRR_EndoS
DUF7617
Motif
Other DBs
NCBI-GeneID:
127682478
NCBI-ProteinID:
XP_052034782
LinkDB
All DBs
Position
1:complement(170410434..170430546)
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AA seq
709 aa
AA seq
DB search
MAQAHIRGSPCPLLLPGRMSWPHGALLLLWLFSPPLRAGGGGVAVTSAAGGGSPPATSCP
AACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLS
KNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAF
NRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSG
NRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFT
PLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSH
FTCYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHD
GTLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGGPGGGGPGGGGGGGGA
GGYTYFTTVTVETLETQPGEEAQQPRGTEKEPPGPTTDGAWGGGRPDAAAPASASTTAPA
PRSSKPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLRKQ
HQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGAGVGGDSHLALPALERDHLNH
HHYVAAAFKAHYGGNPGGGCGAKGPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggcccacatccgcggctccccgtgccccttgctgctgcctggtaggatgtcc
tggccccacggggctctcctgctcctgtggctcttctccccacccctgagggccggtggg
ggcggtgtggccgtgacctcagcggctggaggaggctccccgccagccacctcctgccca
gcagcctgctcctgcagcaaccaggccagccgggtgatctgcacgcggagggagctagcc
gaggtgccagccagcatcccggtcaacacccgctacctgaacctgcaagagaacagcatc
caggtgatccgcaccgacacattcaagcacctgcgacacctggagatcctgcaactgagc
aagaacctggtgcgcaagatcgaggtgggcgcgttcaatgggctgcccagtctcaacaca
ctggaactcttcgacaaccggctgaccacagtgcccacgcaggcctttgagtacctgtcc
aagctccgggagctgtggctgcgcaacaaccccatcgaaagcatcccgtcctacgccttc
aaccgcgtgccctcactgcgccgcctggacctgggcgagctgaagcgactggagtacata
tcggaggcggccttcgaggggctggtgaacctgcgctacctcaacctgggcatgtgcaac
ctgaaggacatccccaacctcacagcactcgtgcgcctggaggagctggagctgtcgggg
aaccggctggacctaattcgccccggctctttccagggcctcaccagcctgcgcaagctg
tggctgatgcatgcccaagtggccaccatcgagcgaaacgccttcgacgacctcaagtcg
ctggaggagctaaacctgtcccacaacaacctgatgtcgctgccgcatgaccttttcacg
ccccttcaccgcctggagcgtgtccacctcaaccacaacccctggcactgcaactgtgac
gtgctgtggctcagctggtggctgaaggagaccgtgcccagcaataccacatgctgcgca
cgctgccacgcgcccgccggcctcaagggccgctacatcggcgagctggaccagtcgcac
ttcacctgctatgccccggtcatcgtggagccacccacagacctcaatgtcaccgagggc
atggcggccgagctcaagtgccgcacaggcacatccatgacgtcggtcaactggctgacc
cctaacggcacgctcatgacgcacggttcctatcgtgtgcgcatttccgtgctgcacgat
ggtacactcaacttcaccaatgtcaccgtgcaggacacgggccagtacacgtgcatggtg
acaaactcggccggcaacactactgcctcggccacgcttaacgtgtcggccgtggaccct
gtggctgcgggagggcctggtggcgggggcccggggggtgggggcggtggagggggcgcg
ggcggctacacctacttcaccacggtgaccgtggagacgctggagacgcagccgggggag
gaggcccagcagccccgaggtactgagaaggagcccccggggcccacgactgatggcgcg
tggggcggcggccgtcctgacgctgcagccccggcctcggcgtccaccacggcaccggcc
ccgcgctcctcgaagcccacggagaaagctttcacggtgcccatcacggacgtgacagag
aacgcgcttaaggatctagacgatgtcatgaagaccaccaaaatcatcatcggctgcttc
gtggccatcaccttcatggccgccgtgatgctggtggccttctacaagctgcgcaagcag
caccagctgcacaagcaccacgggcccacgcgcactgtggagatcatcaacgtggaggac
gagctgcccgccgcctccgctgtgtcggtggccgcggccgccgccgtggctggaggcgcg
ggcgtgggtggggacagccacctggcccttccggcgctggagcgagaccacctcaaccac
caccactacgtggcggctgccttcaaggcgcactacggcggcaacccaggaggcgggtgc
ggggccaaaggccccggcctcaactccatccacgaacctctgctcttcaagagcggctcc
aaggagaacgtgcaagagacacaaatctaa
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