KEGG   Apodemus sylvaticus (European woodmouse): 127682655
Entry
127682655         CDS       T10613                                 
Symbol
Nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
  KO
K02580  nuclear factor NF-kappa-B p105 subunit
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl01523  Antifolate resistance
asyl04010  MAPK signaling pathway
asyl04014  Ras signaling pathway
asyl04024  cAMP signaling pathway
asyl04062  Chemokine signaling pathway
asyl04064  NF-kappa B signaling pathway
asyl04066  HIF-1 signaling pathway
asyl04071  Sphingolipid signaling pathway
asyl04151  PI3K-Akt signaling pathway
asyl04210  Apoptosis
asyl04211  Longevity regulating pathway
asyl04218  Cellular senescence
asyl04380  Osteoclast differentiation
asyl04613  Neutrophil extracellular trap formation
asyl04620  Toll-like receptor signaling pathway
asyl04621  NOD-like receptor signaling pathway
asyl04622  RIG-I-like receptor signaling pathway
asyl04623  Cytosolic DNA-sensing pathway
asyl04625  C-type lectin receptor signaling pathway
asyl04657  IL-17 signaling pathway
asyl04658  Th1 and Th2 cell differentiation
asyl04659  Th17 cell differentiation
asyl04660  T cell receptor signaling pathway
asyl04662  B cell receptor signaling pathway
asyl04668  TNF signaling pathway
asyl04722  Neurotrophin signaling pathway
asyl04917  Prolactin signaling pathway
asyl04920  Adipocytokine signaling pathway
asyl04926  Relaxin signaling pathway
asyl04931  Insulin resistance
asyl04932  Non-alcoholic fatty liver disease
asyl04933  AGE-RAGE signaling pathway in diabetic complications
asyl04936  Alcoholic liver disease
asyl05010  Alzheimer disease
asyl05022  Pathways of neurodegeneration - multiple diseases
asyl05030  Cocaine addiction
asyl05132  Salmonella infection
asyl05133  Pertussis
asyl05134  Legionellosis
asyl05135  Yersinia infection
asyl05140  Leishmaniasis
asyl05142  Chagas disease
asyl05145  Toxoplasmosis
asyl05146  Amoebiasis
asyl05152  Tuberculosis
asyl05160  Hepatitis C
asyl05161  Hepatitis B
asyl05162  Measles
asyl05163  Human cytomegalovirus infection
asyl05164  Influenza A
asyl05165  Human papillomavirus infection
asyl05166  Human T-cell leukemia virus 1 infection
asyl05167  Kaposi sarcoma-associated herpesvirus infection
asyl05168  Herpes simplex virus 1 infection
asyl05169  Epstein-Barr virus infection
asyl05170  Human immunodeficiency virus 1 infection
asyl05171  Coronavirus disease - COVID-19
asyl05200  Pathways in cancer
asyl05202  Transcriptional misregulation in cancer
asyl05203  Viral carcinogenesis
asyl05206  MicroRNAs in cancer
asyl05207  Chemical carcinogenesis - receptor activation
asyl05208  Chemical carcinogenesis - reactive oxygen species
asyl05212  Pancreatic cancer
asyl05215  Prostate cancer
asyl05220  Chronic myeloid leukemia
asyl05221  Acute myeloid leukemia
asyl05222  Small cell lung cancer
asyl05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
asyl05321  Inflammatory bowel disease
asyl05415  Diabetic cardiomyopathy
asyl05417  Lipid and atherosclerosis
asyl05418  Fluid shear stress and atherosclerosis
Brite
Transcription factors [BR:asyl03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    127682655 (Nfkb1)
SSDB
Other DBs
NCBI-GeneID: 127682655
NCBI-ProteinID: XP_052035128
LinkDB
Position
4:26962837..27076583
AA seq 972 aa
MAEDDPYVTGQMFHLNTALTHSIFNAELYPPEIPLSTDGPYLQILEQPKQRGFRFRYVCE
GPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTHGKNIHLHAHSLVGKHCEDGI
CTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEG
GGDRQLTDREKEIIRQAALQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDS
KAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSP
TDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRK
RQKLMPNFSDSFGGGGSGAGAGGGGMFGSGGGGGSTGSPGPGYGFPHYGFPAYGGITFHP
GATKSNAGLTHGTINTKFKNDPKDCTKSDDREILNLPEKETESEGPGLPVASTETEAMTL
APTMEDKEQDVGFQDNLFLEKALQLAKRHANALFDYAVTGDVKMLLAVQRHLTAVQDENG
DSVLHLAIIHLHAQLVRDLLEVTSGLISDDIINMRNDLYQTPLHLAVITQQEDVVEDLLR
VGADLSLLDRWGNSALHLAAKEGHDKILSILLKNRKAALLIDHPNGEGLNAIHIAVMSNS
LPCLLLLVAAGAEVNAQEQKSGRTALHLAVEYDNISLAGCLLLEGDAHVDSTTYDGTTPL
HIAAGRGSTRLAALLKAAGADPLVENFEPLYDLDDSWEQAGDDEGVVPGTTPLDMAANWQ
VFDILNGKPYERAFTSDDILPQGDMKQLTEDTRLQLCKLLEIPDPDKNWATLAQKLGLGI
LNNAFRLSPAPSKTLMDNYEVSGGTIKELMEALQQMGYTEAIEVIQAAFRTPETTASSPV
TTAQAHLLPLSSPSTRQHIDELRDSDSTCDSGVETSFRKLSFSESLTGDSPLLSLNKMPH
SYGQEGPIEGKI
NT seq 2919 nt   +upstreamnt  +downstreamnt
atggcggaggacgatccctacgtaactgggcaaatgtttcatttgaacactgctttgact
cattcaatatttaatgcagaattatatccaccagaaataccactgtcaacggatggccca
taccttcaaatattagagcaaccaaaacagaggggatttcgattccgctatgtgtgtgaa
ggcccgtcccacggaggacttccaggagcctctagtgagaagaacaagaaatcctacccg
caggtcaaaatttgcaactatgtgggacctgcaaaggttatcgttcagttggtcacacat
ggaaaaaacatccacctgcatgcccacagcctggtgggcaaacactgtgaggatggcata
tgcaccgtaaccgcaggcccgaaggacatggtggttggctttgcaaacctgggaatactc
cacgtgactaagaaaaaggtattcgaaacgctggaagcacggatgacagaggcgtgtatt
aggggctataatcctggccttctggtgcattccgacctcgcctacctacaagctgaaggt
ggaggagaccggcagctcacagacagagagaaggagatcatccgccaggccgccctgcag
cagaccaaggagatggacctgagtgtggtacgcctcatgttcacagccttcctccccgac
agcactggcagcttcactcggagactggaacctgtggtgtcagatgccatctatgacagc
aaagccccgaacgcgtccaacctgaaaatcgtgcgaatggacagaacggcaggctgtgtg
acaggaggggaagagatttatcttctctgtgacaaggttcagaaagatgacatccagatc
cgcttttatgaagaggaagaaaatggcggcgtttgggaaggattcggggacttctccccg
acggatgttcatagacagtttgccattgtcttcaaaacgcccaaatataaggacgtcaac
attacaaaaccagcttctgtgttcgttcagcttcggagaaaatcggatttggaaacaagt
gaaccgaaacctttcctctactaccctgagatcaaagacaaagaggaagtgcagaggaaa
cgccagaagctcatgcccaacttctcggacagtttcggcggtggcggcagtggagcggga
gccggtggtggaggcatgttcggtagcggtggtggcggagggagtaccggaagtcccggc
ccagggtatggcttcccgcactacgggttccctgcttacggtgggattacattccatccc
ggagccactaaatccaacgcaggactcacccacggcaccataaacaccaaatttaaaaac
gaccctaaagattgtaccaaaagtgatgacagagagattctgaatctccctgagaaggaa
acagaaagcgaggggcccggcctgcctgtggccagcactgagaccgaagcaatgaccctg
gcacccaccatggaagacaaggagcaggatgtggggtttcaggacaacctctttcttgag
aaggcactgcagctcgccaagcggcacgccaatgcccttttcgactacgccgtgacggga
gatgtgaagatgttgctggccgtgcagcgccacctcaccgcggtgcaggatgagaatggg
gacagtgtcttacacttagccatcatccaccttcatgctcagctcgtgagggatctgctg
gaggtcacatctggtttgatctccgatgacatcatcaacatgagaaatgatctgtatcag
acacctttgcacttggccgtgatcacccagcaggaagatgtggtggaggacttgctgagg
gttggggctgacctgagccttctggaccgctggggcaactctgccctgcacctagctgcc
aaagaaggacacgataaaatcctcagcatcctactgaagaacaggaaagcagcgctcctt
attgaccaccccaacggggaaggtctaaatgccatccacatagctgtaatgagcaatagc
ctgccctgcctgctgctgctggtagctgctggggcggaagtcaatgctcaggagcagaag
tcggggcgcacagcgctgcacctggccgtggagtacgacaacatctcattggctggctgc
ctgcttctggagggtgatgcccacgtggacagtaccacctatgatgggactacacctctg
catatcgccgctggaagggggtccaccagactggcagctcttctcaaagcggcaggagca
gaccccctggtggagaactttgagcctctctacgacctggacgactcttgggagcaggct
ggagatgatgagggtgtggtaccaggtaccacacccctggacatggctgccaactggcag
gtatttgacatactaaatgggaaaccatatgagcgagcattcacatctgatgatatacta
ccacaaggagacatgaagcagttgacagaagacacgagactgcaactctgcaagctgctg
gaaattcctgatccagacaaaaactgggccactctggcccagaagttaggtctggggata
ttgaacaacgccttccggctgagccctgccccttctaaaactcttatggacaactatgag
gtctctgggggcaccatcaaagagctgatggaggccctgcaacagatgggctacacagag
gccattgaagtgatccaggcagccttccgcaccccggaaaccacagcctccagccccgtg
accactgctcaggcccacttgctgcccctctcgtctccctctacaaggcagcacatagat
gagctccgggacagcgacagcacctgtgacagcggtgtggagacatccttccgcaaactc
agcttttcagagtctctcactggggatagcccgctgctgtctctgaacaaaatgccccac
agttatggccaggaaggacctatagaaggcaagatttag

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