Apodemus sylvaticus (European woodmouse): 127683022
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Entry
127683022 CDS
T10613
Symbol
Snx27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127683022 (Snx27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asyl04990
]
127683022 (Snx27)
Membrane trafficking [BR:
asyl04131
]
Protein recycling
Others
Others
127683022 (Snx27)
Domain-containing proteins not elsewhere classified [BR:
asyl04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
127683022 (Snx27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
USP7_C2
SNX17_FERM_C
PDZ_2
RA_3
SNX17-31_F2_FERM
UBX
RBD
Ras_bdg_2
Pept_S41_N_bact
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
127683022
NCBI-ProteinID:
XP_052035817
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All DBs
Position
4:69182685..69258903
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AA seq
539 aa
AA seq
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MADEDGEGIHPSAPHRNGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVRGQVS
EGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIR
AGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVV
YNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEY
LEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTAATVRVKKNSTTDQVYQ
AIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLF
TTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRTCE
GYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEE
GMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRDVAT
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaggacggggaagggattcacccctcagccccgcaccggaatggaggcggc
ggcggggggtctgggctccactgcgccgggaacggtggcgggggaggcggcggcccgcgg
gtcgtgcgcattgtcaagtccgaatccggctacggcttcaacgtgcggggccaagtgagc
gagggcgggcaactgcggagcatcaacggggagctgtacgcgccgctgcagcatgtgagc
gccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggggaccgcatcctg
gaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtggtggacctgatccga
gcaggcgagaaggaattgatcttgacagtgttgtctgtacctcctcatgaggctgataac
ctagatcccagtgacgactccttgggacaatccttttatgattacacagaaaagcaagca
gtgcccatatcggttcccacatacaaacatgtggagcagaatggtgagaagtttgtggta
tacaatgtttacatggctgggaggcagctgtgttctaagcggtaccgggagtttgccata
ctgcaccaaaacctgaagagagaatttgccaactttacatttcctcgacttccaggaaag
tggccattctcattatcagaacaacagctagatgcccggcgtcgggggttggaagaatat
ctagaaaaggtgtgttcaatccgggtcattggtgagagcgacatcatgcaggagttcctg
tctgaatccgatgagaattacaatggtgtgtctgatgtagagctgagagtagcattaccg
gatgggacagccgccactgtcagagttaagaagaacagtactacagaccaagtgtaccag
gctattgcagcaaaggttggcatggacagtacaacagtgaattactttgccttatttgaa
gtgatcaatcattcctttgtacgtaagctggcacctaacgaatttcctcataaactctac
gtccaaaattatacgtcagctgtgccaggcacctgtctgaccattcgcaagtggctcttt
acaacagaagaagaaatcctcttaaatgacaatgaccttgctgttacatacttctttcat
caggctgttgatgatgtaaagaaaggttacattaaagcagaagagaagtcttaccagtta
cagaagctatacgaacaaaggaagatggtcatgtacctcaacatgctaaggacctgtgag
ggctacaatgaaatcatctttcctcactgtgcctgtgactccaggaggaaggggcatgtc
atcacagccatcagcatcacgcactttaaacttcatgcctgcactgaagaagggcagctg
gagaaccaggtaatagcgtttgaatgggatgagatgcagcgatgggacacagatgaagaa
ggaatggccttctgttttgaatatgcgcgaggagagaagaagcctcgatgggttaaaatc
ttcacaccatatttcaattacatgcatgagtgctttgagagggtgttctgcgagctcaag
tggagaaaagagaatattttccagatggcgaggtcacagcagagggatgtggccacctag
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